LOCUS       XM_006520147            2413 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus sorting nexin 31 (Snx31), transcript
            variant X2, mRNA.
ACCESSION   XM_006520147
VERSION     XM_006520147.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006520147.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..2413
                     /gene="Snx31"
                     /gene_synonym="4631426E05Rik"
                     /note="sorting nexin 31; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 14 ESTs, 13 long SRA reads, 3 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:66696"
                     /db_xref="MGI:MGI:1913946"
     CDS             116..1429
                     /gene="Snx31"
                     /gene_synonym="4631426E05Rik"
                     /codon_start=1
                     /product="sorting nexin-31 isoform X2"
                     /protein_id="XP_006520210.1"
                     /db_xref="GeneID:66696"
                     /db_xref="MGI:MGI:1913946"
                     /translation="MKMHFCIPVSQQRPDALGGRYVLYSVYLDGFLFCKVRYSQLHRW
                     DEQLRRVFGNCLPPFPPKYYLAMTTAMAEERRDQLERYLQNVTADPRVTRSDVFTEFL
                     TLVQLHTLNITIQNVELAVFLPDGRSIKVEGLTSDTAERVLEVMAHKLGLQPDLVGYF
                     GLFLIQCFPEGKLSVVKKLADFELPYTSLQSSEMENCKIGLRKWYLDPALDSMLMDCR
                     AAGDLLYMQAVQDIEKEWMKPTQAQREELKALQKKENQTKFLELSQEVRHYGYVQLDP
                     CTCNHPEPGCGAQLSIGNNEISCCITLPNGQIQDIAFQMSRVKCWQVTFLGTLLDTDG
                     PQRTLNQNLELRFQYSEDSCQQWFVIYTKQAFFLSSCLKKMISERMTKLTEQSPEMIE
                     VPEQGRSKKHPSQPSQKVYFNFLRKGKMKRSEGDYVWDTLMEEGL"
ORIGIN      
        1 aggcgcagac cccgcccacc cgcagaccca aggcaggagt gggagctcag gacccagccc
       61 agactctagg cggcaggtcc tgttctccac gctgtccctg gtcatcgcca gagccatgaa
      121 gatgcacttc tgcatcccgg tgtcccagca gcggccagac gcgctggggg gccgctacgt
      181 gttgtactcc gtgtacctgg acgggttcct cttctgcaaa gtacgctaca gccagctgca
      241 ccgctgggat gaacagctga gacgggtgtt tggaaactgc ctgccccctt tcccacccaa
      301 gtactacctg gcaatgacta ctgctatggc tgaagagagg agggaccagt tggaacgcta
      361 cctgcaaaat gtaactgcgg atccccgtgt gacaaggagt gatgtcttca ctgagttttt
      421 aacactggtg cagctgcaca cattgaatat caccatccag aatgtcgagc tggctgtatt
      481 cctgcctgat ggaaggagca ttaaagtaga aggtctaaca tcagatacgg ctgaaagggt
      541 cctggaggtg atggcccaca aactcggatt gcagccagat ctggtgggct acttcggcct
      601 tttccttatc cagtgtttcc cggagggcaa gctctctgtg gtgaagaagc tggccgactt
      661 tgagctgcct tacactagtc ttcagagttc tgaaatggaa aactgtaaga tcgggctcag
      721 aaagtggtac ctggacccag ctctggactc catgttgatg gactgcagag cagctggaga
      781 cttgctgtac atgcaggcag tgcaggacat tgaaaaagaa tggatgaaac ccacacaggc
      841 tcagagggag gaactaaagg cactgcagaa gaaagagaat caaacaaagt ttttggagct
      901 gtcgcaggag gtccggcact atgggtatgt tcagctggat ccctgcacct gcaaccaccc
      961 ggaacctggc tgtggggccc agctttccat cggcaataat gagatcagct gctgtataac
     1021 tttgcctaat ggccagatcc aggacattgc tttccagatg agcagagtga agtgctggca
     1081 ggtcactttc cttggaactc tgctggatac cgatgggccc cagcgaactc tcaaccagaa
     1141 cctagagctg agatttcagt atagtgaaga tagttgccag cagtggtttg ttatttacac
     1201 caaacaggct tttttcctga gcagctgcct gaagaagatg atctcagaga ggatgacaaa
     1261 gctcactgag cagagcccag agatgatcga ggttccagaa caaggcagaa gtaaaaagca
     1321 cccgagccaa cctagccaga aagtctattt taattttctg agaaaaggca agatgaagag
     1381 atccgaaggt gactatgttt gggataccct gatggaagaa ggtctctgaa ggaatctcat
     1441 ctctacggct gtcttaagac agtgccagcg cgtgggtgtg ggaggtgggc ttcccaccat
     1501 ccaggcattt atccacttct ctctttcttt gacattgcag tctcctgtgc tgatcagtct
     1561 aacttcagca ctccataact ctcagggcta acatggtgta ggaaccaacg ctatagagct
     1621 gacttaagtg gcaggtgggc aggttcaaat caaccaatgg gaggtttgtt ctatcttccc
     1681 tctaagatag atgtacctgg ctccatgaag ccctttgtat gttctcgtat tgcagggata
     1741 aaaagcttgt tctaaattat aggaatatgt ttggcaccaa agtagattca ccagattggg
     1801 aaagtatggc ttctttgacc tatccagaga gcaaaaggag ctaaaattcc aatccccacc
     1861 tttactcact ccttagtcta ctaaaacgat gaccacaaag tcccgggctg ccctggcctg
     1921 cgtccctcac tgtatggttc tgttccacta ttagaagact gggctctggg ctggagaaac
     1981 ggctcagtgg ttaagagcac ttgctacttt tgcagaggac taaattccct taacccacat
     2041 ggtacttaac aaccagctgt aactccagct ccagaggacc cagtgccctc ttctggcctc
     2101 ctctggcacc cacacataca cataataaaa ataaataaaa ttgaattctg accaataatc
     2161 atctcgccaa tttgaatatt tttcttttgg aaatcaatag tcctgcactc gtagcaaatc
     2221 tcttagcttt acaaatgtgt attttttttt ccacaatagt tttccttaaa cagcttcagg
     2281 tgtaccatac taacgtaatt agatatggaa ttaagagcaa aatagagagg ggaagataaa
     2341 tatgcaaaaa taactaatgt tcttttctga gttagctaat tatgaaataa atataaaatc
     2401 cgatgaatac aga
//
