LOCUS       XM_036155012            1996 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus sorting nexin 14 (Snx14), transcript
            variant X1, mRNA.
ACCESSION   XM_036155012
VERSION     XM_036155012.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..1996
                     /gene="Snx14"
                     /gene_synonym="B830022K16; C330035N22Rik; YR-14"
                     /note="sorting nexin 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 69 ESTs, 262 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 12 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:244962"
                     /db_xref="MGI:MGI:2155664"
     CDS             162..1847
                     /gene="Snx14"
                     /gene_synonym="B830022K16; C330035N22Rik; YR-14"
                     /codon_start=1
                     /product="sorting nexin-14 isoform X1"
                     /protein_id="XP_036010905.1"
                     /db_xref="GeneID:244962"
                     /db_xref="MGI:MGI:2155664"
                     /translation="MLSLHEELQKIYKTYCLDESIDKIRFDPFIVEEIQRIAEGPYID
                     VVKLQTMRCLFEAYEHVLSLLENVFTPMFCHSDEYFRQLLRGAESPTRNSKFNRGSLS
                     LDDFRSTQKRGESFGISRIGSKIKGVFKSTTMEGAVLPNYGVAEGEDDFIEEGIVVME
                     DDSPVEAVSTPNTPRNLAAWKISIPYVDFFEDPSSERKEKKERIPVFCIDVERNDRRA
                     VGHEPEHWSVYRRYLEFYVLESKLTEFHGTFPDAQLPSKRIIGPKNYEFLKSKREEFQ
                     EYLQKLVQHPELSNSQLLADFLSPNGGETQFLDKILPDVNLGKIIKSVPGKLMKEKGQ
                     HLEPFIMSFINSCESPKPKPSRPELTILSPTSENNKKLFNDLFKNNANRAENTERKQN
                     QNYFMEVMTVDGVYDYLMYVGRVVFQVPDWLHHLLMGTRILFKNTLEMYTDYYLQCKL
                     EQLFQEHRLVSLITLLRDAIFCENTEPRSLQDKQKGAKQTFEEMMNYIPDLIVKCIGE
                     ETKYESIRLLFDGLQQPVLNKQLTYVLLDIVIQELFPELNKVQKEATSMTSWM"
ORIGIN      
        1 cgtcaccatg cttgctagtg ctgtggctgt ttagagcaga tctgctgtcc agacgacatt
       61 tcatgctaga tatctcgggt gactgagctt ctccagctgt ctagtccttt ctagaggaat
      121 ttaatgatag aattttgcgt ccagagttat caaatgatga aatgctatct ctccatgaag
      181 aattgcagaa gatttataag acctactgct tggatgaaag cattgacaaa attcgctttg
      241 atcccttcat tgtcgaagag attcaaagaa ttgctgaagg cccatacata gatgttgtga
      301 agctgcaaac tatgaggtgt ctttttgaag catatgagca cgtcctttcc ctgttggaga
      361 acgtgtttac ccccatgttc tgccacagtg atgagtattt taggcaactt ttaagaggtg
      421 cagaatcgcc cacacgcaat tccaaattca acagaggtag cctaagtttg gatgatttcc
      481 gaagcacaca aaaaagagga gaatcgtttg gaatcagcag aataggtagc aaaattaaag
      541 gcgtattcaa gagtacgaca atggagggag ctgtgctgcc taattacggg gtggctgaag
      601 gcgaagatga ctttattgaa gaagggattg tggtaatgga ggatgactct ccagtagaag
      661 ctgtgagcac acctaacact cctcgaaacc ttgctgcctg gaaaattagc attccgtatg
      721 tagacttttt tgaagatccc tcctctgaaa ggaaagagaa gaaggagaga attcctgtgt
      781 tttgtatcga tgttgaaaga aacgacagac gagcagttgg acacgagcct gagcattggt
      841 ctgtctatag aagatatctt gaattctatg ttcttgaatc aaaactaaca gaatttcatg
      901 gcacatttcc tgatgctcag cttccatcca aaaggatcat tggccccaaa aactatgagt
      961 ttttgaagtc gaagagagag gagttccagg agtatctgca gaaacttgtg cagcacccgg
     1021 agctgagtaa cagccagctt ctggctgact ttctctcccc caacggtggg gagacacagt
     1081 ttctagataa gatacttcca gatgtaaatc ttggaaaaat tataaagtct gttcctggga
     1141 aactaatgaa agagaaaggt cagcatttgg agccattcat catgagtttc attaattctt
     1201 gcgaatctcc caaacctaaa ccgagtcggc cagaactgac gattctcagc cccacttccg
     1261 aaaacaacaa gaagcttttc aacgatctgt ttaagaataa tgcaaaccgc gctgagaaca
     1321 cagagcgaaa gcaaaatcag aactacttca tggaggtgat gactgtggac ggagtctatg
     1381 attacctgat gtatgtaggg cgagtagttt ttcaagtccc agactggctt catcatcttc
     1441 taatgggaac tcgaatcctc tttaagaaca ccctggaaat gtacacagac tactacctcc
     1501 agtgcaagct ggagcagctg tttcaggagc accggctggt ctccctcatc acccttctca
     1561 gagatgctat attttgtgaa aatactgaac ctcgctctct ccaagataag caaaaaggag
     1621 caaaacagac ttttgaagaa atgatgaatt acattccaga tctgatagtc aagtgtatcg
     1681 gtgaagaaac caagtacgaa agcatcagac tcctgtttga tggcctgcag cagccagtgc
     1741 tcaacaagca gctgacctat gtgttgctgg acattgtgat acaggagctg tttccagagc
     1801 taaataaggt acaaaaggaa gctacctcca tgacatcctg gatgtaaaca cttggtatag
     1861 aataacatac cagaataata gaaatgtact tttcactttg tatattttta taaatatcat
     1921 gtactttagt gtttggaata tattttttgt tttaataaag actaacaaat agcaataaaa
     1981 agtggtttag gtatta
//
