LOCUS       XM_036162035            2037 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus sorting nexin 12 (Snx12), transcript
            variant X2, mRNA.
ACCESSION   XM_036162035
VERSION     XM_036162035.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..2037
                     /gene="Snx12"
                     /gene_synonym="2610001F05Rik; SDP8"
                     /note="sorting nexin 12; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 2 ESTs, 454 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:55988"
                     /db_xref="MGI:MGI:1919331"
     CDS             19..666
                     /gene="Snx12"
                     /gene_synonym="2610001F05Rik; SDP8"
                     /codon_start=1
                     /product="sorting nexin-12 isoform X1"
                     /protein_id="XP_036017928.1"
                     /db_xref="GeneID:55988"
                     /db_xref="MGI:MGI:1919331"
                     /translation="MRARVRAAVVWGLAGYFASGRGCARSCLRPLSPTPFAGTGLFFG
                     KMSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTN
                     LPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESF
                     IEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVLGLHWLLSMR"
ORIGIN      
        1 cggtgtgtgc gtgcgcgcat gcgtgcgcgc gtgcgcgccg ccgtcgtctg ggggttggct
       61 ggttattttg caagcgggag gggctgtgcg cgctcttgcc tcaggcctct gtcccccacc
      121 cccttcgccg gtaccgggct cttcttcgga aagatgtcgg acaccgcagt ggctgacact
      181 aggcgcctta actcgaagcc ccaagacctg accgacgctt acgggccgcc cagtaacttc
      241 ctggagatag acatctttaa tccacagacg gtgggcgtgg gccgcgcgcg cttcaccacc
      301 tatgaggttc gcatgcggac aaacctaccc atcttcaagc tgaaagaatc ctgtgtacgg
      361 cgacgctata gtgactttga gtggctgaaa aatgagctgg agcgagatag taagatcgta
      421 gtaccaccac tgcctgggaa agccttgaag cggcagctcc ctttccgagg agatgaaggg
      481 atctttgagg agtctttcat tgaagaaagg aggcaaggcc tcgaacagtt tattaacaaa
      541 attgctgggc acccactggc tcagaatgaa cgctgtctac acatgttcct gcaggaggag
      601 gcaattgata ggaactacgt ccctgggaag gtccttggat tacactggct gctctccatg
      661 aggtaaactt gcggagtcta taattaaata gaaaaaagca tgtcagcaag ttcacaaggt
      721 caatgctaca gtacaagatg gagtcaggat cacagaatga catcactact atcatcttca
      781 tctcatgaag tatgaacaaa tcagtagaga ccctattgtc aaagtccagt tttgacatga
      841 ctcggtctga agtctgaagt aggtgtggga tcagcagaac atggacacag gaatcttctt
      901 gatagttcag tcaagttctc tcttctttat ttccccccaa cccccagctt atgttcctca
      961 gcaaactctc aattacagtg tggctatatt ctatttttct ttaagtgaat gattacaatg
     1021 aatttcctaa tacctttatg tgattaaatg ttttacatat tacaggtgaa aaaattccta
     1081 agaacccaca tacattcgta tctaagcaac ttgttataga ttaataaaga aatcaagtac
     1141 atttttctca gctagtttct cttattggta ggctgcaatt tgcagttaca aagaaaggat
     1201 caatcatctt attatttacc ttaaaaagaa atcttatgca tacctctaac tacaacccca
     1261 gacacctgca gccatagtga ccaccagatg agagccctac cccaattccc tgcctaccga
     1321 ctcctctggg gagacccagc agcagtgagc tcctccctgc ccactctgta ctccatttcc
     1381 caggccagtc tgttgctgcc agagccaacc aggacaaaca aaggcctaca accatcagga
     1441 accaccacca gctctacctg catctctgga ggactgctgc catcagggac ttctagactt
     1501 gccaatggtc aaccagatgg ttaaagttct ttcccagggt ggtgactgag tcattaatct
     1561 gctcctacag cgatgtttga agaagatcca gcattatttt attgtatcca tctcatatac
     1621 tgaacctttg cagcttcaga taacactgaa agctttgcag tcatcctggc aggagagaag
     1681 atattctaaa aggacacctg tgctccttcc tttggctgtc agactattga gacaatgaat
     1741 ttcaaggaat ggaatttccc cccaggaatc tcatgctggg gacagccaga ggggactttg
     1801 tctttctgga agaaatttga cacaacttgt cagaccactt tgcaggagag actgagcctg
     1861 agcccccacc tagaccagga ctgctaatat atacttcttg atgtctactt aagcttaagt
     1921 aagactcctg tgaatgctca gaagatgggg ggcggggggc ggggctgact caggacataa
     1981 ttgctcttct ccccaatgta gcacatcgaa taaatccctt ttctctgttt tccacta
//
