LOCUS       XM_030255600            2583 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus sorting nexin 10 (Snx10), transcript
            variant X1, mRNA.
ACCESSION   XM_030255600
VERSION     XM_030255600.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030255600.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..2583
                     /gene="Snx10"
                     /gene_synonym="2410004M09Rik"
                     /note="sorting nexin 10; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 10 ESTs, 1475 long SRA reads, 10 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 22 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:71982"
                     /db_xref="MGI:MGI:1919232"
     CDS             266..871
                     /gene="Snx10"
                     /gene_synonym="2410004M09Rik"
                     /codon_start=1
                     /product="sorting nexin-10 isoform X1"
                     /protein_id="XP_030111460.1"
                     /db_xref="GeneID:71982"
                     /db_xref="MGI:MGI:1919232"
                     /translation="MFPEQQKEEFVSVWVRDPRIQKEDFWHSYIDYEICIHTNSMCFT
                     MKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNLFFNMNNRQHVDQRRQGLEDFL
                     RKVLQNALLLSDSSLHLFLQSHLNSEDIEACVSGQTKYSVEEAIHKFALMNRRFPEEE
                     EEGKKDADVEYDSESSSSGLGHSSDDSSSHGCKTSPALQES"
ORIGIN      
        1 cagggcgggg cggggcgctg cgtgcgctgg acgcggggct gcgctcctcg ggttcgctct
       61 taggcgctcg tcgccgccgc gccttgagtc agcaaactcc gccgtgctcc gggccgggcg
      121 ttcagaaccg cgtgctcagg ctcaggcggc ttagctgtgt aagaacaaaa taccctggga
      181 tgtccagtct gtcatcagac tgatgagcaa acaaagccac agcccctaag aactcctgag
      241 aggttgatcg tgtcctgagc tgaagatgtt cccagaacag cagaaagagg agttcgtgag
      301 tgtctgggtc cgggacccca ggattcagaa ggaggacttt tggcactctt atatcgacta
      361 tgagatctgc attcacacaa atagcatgtg ttttacaatg aaaacatctt gtgtacgaag
      421 aaggtataga gagttcgtgt ggctgaggca aagactccaa agcaacgcgt tgctggtaca
      481 attaccagaa cttccgtcta aaaacctgtt tttcaacatg aacaatcgcc agcatgtcga
      541 ccaacgccgc cagggcttgg aagatttcct cagaaaagtc ctgcagaatg cactcttgct
      601 ttccgatagc agcctccacc tcttcctgca gagccatctg aactccgagg acattgaagc
      661 atgtgtttct gggcagacca agtactcggt ggaagaagcc attcacaagt ttgctttaat
      721 gaatagacgg tttcccgaag aagaagaaga agggaagaaa gacgccgacg tagagtatga
      781 ttcagaaagt tcatcctctg ggcttggaca cagtagtgat gacagcagtt ctcatggatg
      841 taaaacgagc ccagctctgc aggagtcctg agaaggaatt ctggggctac caccttagga
      901 acgaaattgt gcccagccag aaagaatgct ggctcataat agattcttac ccaatgccac
      961 tgtcagtatc ccaggtagtg aaattcttaa agtggtgggg tattagtact agtagtttta
     1021 tgttgtctaa ttctagccaa gcttctgtgt gaagctataa ggtctgtgaa tgccatacgg
     1081 ccctttattg ccatcctata cttgtaaata cgatcctgct ctcaagtgaa atgagttata
     1141 tgagatatat atatatatat ttggtcttaa ctggatttta aagagtttgg cgtattagta
     1201 gcatttaaag ccagataggg cacccttgct gtgtcaatga ggaagttact gtaaacacag
     1261 tgttcgactg aagctagagt gcagagtcgc agcactgctg actgcctgcc tctctgacat
     1321 gtggctcttg tttcgtgggg acttttcctc tggaaaatac tttgccttca ggtatttgat
     1381 tgaaatattt aagagtattt aagctttcca gtatcctgta tcatgtgtaa atggaaaata
     1441 tgtcttacaa atagagatgc actaaaacaa caaaaacaac aacaaaacaa acgtttacat
     1501 cctaggaggg aaaaaaaaca aaagtctttg taattttgct taaatttgcc agacacagat
     1561 ttagaaatac attctcactg tccaaaatca gcttaaacac tggctctggc gatgagtcat
     1621 tgtgcaatta gaatcatatc ttatgattta ttttctgtca ttaaaaaaat gtacattaaa
     1681 aaaaaaagtc accaggtagc ttccatgagg aatagctcct cacggttcat tttttcagtt
     1741 agaagaaggt ttttatgagt taattttacc cataaatatt tcagtaattt tggagtggaa
     1801 gttgggttgc taacatcaga gctcatgttc atgttttaga agccctttct ttctaggtgt
     1861 ctctcaaaag actggcttaa ttggaataaa atagcttttt ttttttaagt gtcccaaaga
     1921 taagatatct tggggtccac catgagcttc cagtttcagc cgaggcagca gttttcctgg
     1981 gataattagc caagggttcc ccagagtctt cctaggtatc tctgggaacc agcagaagga
     2041 attttcacct aagagggata acttgttgct tccaatgaat ggctcccact ctcgtgggtg
     2101 caaaagcggc agcaaaaagc agccatttac ttgggtactt aagagttatt gtattaataa
     2161 aaagttattg acttgtcctt tgagagcctt cttacagaga attggttaaa aaaaccaaac
     2221 attcaatttg gaataagaat gattttttaa agttctgtct gaaacattat caaacttgtg
     2281 taaatatttt gatttatgtc ttagatcctg ttaaccgtgt cctctaattg tctttatttt
     2341 aatgccaaaa ggaagtgatt atgcagctgt gtgtagagtt tcagagcaag ttcctcagca
     2401 gtgtagatga attcacatca tttatgtttt aacggcgttt ttttggaaag cataaattgt
     2461 gacatcagtt atcatgctac ttcttggtga cataatataa cctttgaagt taatatgaag
     2521 tgatgtttgc tccataaact ccacagtcac tgttttcaca ttaaacatga aagcaaagca
     2581 aaa
//
