LOCUS       XM_017315072            2594 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus syntrophin, gamma 2 (Sntg2), transcript
            variant X2, mRNA.
ACCESSION   XM_017315072
VERSION     XM_017315072.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017315072.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2594
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..2594
                     /gene="Sntg2"
                     /gene_synonym="2210008K22Rik; 9530013L23; G2syn; Syn5"
                     /note="syntrophin, gamma 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 26 long SRA reads, 1 Protein, and 98% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:268534"
                     /db_xref="MGI:MGI:1919541"
     CDS             369..1910
                     /gene="Sntg2"
                     /gene_synonym="2210008K22Rik; 9530013L23; G2syn; Syn5"
                     /codon_start=1
                     /product="gamma-2-syntrophin isoform X2"
                     /protein_id="XP_017170561.1"
                     /db_xref="GeneID:268534"
                     /db_xref="MGI:MGI:1919541"
                     /translation="MSSASGELLLVLITVTLRRQPVGGLGLSIKGGAEHGVPVVISKI
                     FKDQAADQTEMLFIGDAVLQVNGINVENATHEEVVHLLRNAGDDVTITVEYLREAPSF
                     LKLPLGSPGPSSDHSSRASSPLFDSGLHLNGHCSHTAPSSPSSPIANEPKYEKRWLDT
                     LSVPLSMARISRYKAGTEKLRSSALEVLALDGASTGVLQFSTAQDCADWLRSISTNIS
                     DLTLQHMKMANKCCSPCDQVVHMGWVNERLQGADNSQNFRPKFLALRGSSFYIFGAPP
                     VSTLDWGRAERAYNLCEVLFKVHKFWLSDNYWLQANLYLGLQDFDCEDPRSYCFSVLA
                     NHGKSHIFSVELGSELAVWEKAFQRATFMEVQRTGSKTYLCSWQGETLCFTVDFALGF
                     TCFDGKTKNVLWRFKFSQLKGSSDDGKTRVKLLFQNLDTKQIETKVVTLLMKRNQGQL
                     NDLGCRKSRDRDTIPLRSSAWFQCSSESFYEITDSTSRASWAQFPSMFLNVSVRSLFT
                     APGDE"
ORIGIN      
        1 ttggtgggcg gtgagcagag tagtaggggc cgggctgctg ggaggtgggc ggggttccgt
       61 gcctgccctg cttgctagcg cagtggctgc tggctctgtc cgccccagcc cgtccacaga
      121 ggggcgcggg cgccgtgctg gcgctggact taggagctcc ggagcccgaa gcgcacgcct
      181 agccgcgtgg gcggcgatga gcgccgaggg atcgcagtcc ctggccgccc cccgcgggcg
      241 tcctagtcac ctactggtgc ccgcgcggac caaaacagct ctggccttgt tgtatgacga
      301 ggggttggaa aatgcctatg acgtccgcct gaagctgaca aaagaggtgc tgactattca
      361 aaagcaagat gtcgtctgca tcgggggagc tcctcctggt gctaataact gttacacttc
      421 gcagacaacc tgtgggtggc ctgggcctaa gtatcaaggg aggagcagag catggggtcc
      481 ccgtcgtcat atctaaaata ttcaaagacc aagcagctga ccagacagag atgttgttca
      541 taggagatgc tgtactacag gttaatggca ttaatgtaga aaacgcaacc catgaagaag
      601 tggtgcatct tctgagaaac gctggcgatg acgtcaccat cactgttgag tatctcaggg
      661 aagcaccctc atttctgaag ctgccattag ggtccccagg gccatccagt gaccatagca
      721 gcagggcctc atcgcctctc tttgacagtg gcctgcacct gaatggacac tgcagccaca
      781 cagctccatc atcaccttcc tcacccatag ctaatgaacc aaagtatgag aagcgttggc
      841 tagacacctt gtcagtccct ctgtctatgg ctcggatctc cagatacaaa gctggaacag
      901 aaaagctcag gtccagtgca ttggaggtgc tggccctgga tggagccagc acaggagtcc
      961 ttcaattctc cactgcccag gactgtgctg actggttgcg ttcaatctca accaacatca
     1021 gtgacctgac gcttcaacat atgaaaatgg caaataaatg ctgttctccc tgtgaccagg
     1081 tggtgcacat gggatgggta aatgagaggc tccaaggagc tgacaactct cagaacttca
     1141 gacccaagtt cttggccctg aggggttcat cattctacat ttttggcgct cctccggtaa
     1201 gcacactgga ctggggacga gcagaacgtg cctataacct ctgtgaggtg ctgtttaaag
     1261 ttcacaagtt ctggctttca gataactatt ggctgcaggc aaacctgtat cttggtctcc
     1321 aagattttga ctgtgaagac cccaggtcat actgcttcag cgtcctggcc aaccatggga
     1381 agagccacat cttcagtgta gagctgggca gtgagctggc cgtgtgggag aaggcattcc
     1441 aaagagcaac tttcatggaa gttcagagaa ccgggtccaa aacatatctg tgcagctggc
     1501 aaggggagac gctgtgcttc acggtggatt ttgctctggg attcacctgc tttgacggta
     1561 agacaaagaa cgtactctgg agattcaagt tctctcagct taagggatcc tcagatgatg
     1621 ggaagactcg agtaaagctg ctgtttcaga atctggacac caagcagatt gaaacgaagg
     1681 ttgttacatt gctcatgaag aggaaccaag gacagctgaa tgacctcggc tgcaggaaga
     1741 gtagagacag ggacacaata cccctcagga gcagtgcttg gttccaatgt tcctcagagt
     1801 cattttatga aataacagat tctacaagca gagccagctg ggcccagttt ccatctatgt
     1861 ttttgaatgt gagtgtacgc tcgttattca ctgcccctgg agatgagtga aggctgaaga
     1921 tgtgggttca aagacagagc tcacgttagt gatagaatga aaggtgaatt ggagcacggt
     1981 gtttttaaag gggggaaaca gaagcacaag gatgggtatg cccccctaaa aggagagatg
     2041 aaagcaatcc tccgtcctcg ctgggacagg aagaaaagcc aggaggttgc actgggtagc
     2101 cctgcagagg ttgatgattc tccaagtggc aaagcccaga gtggtatgag ccagtgccag
     2161 ctttgtgcat ttgtaaatta tttgttcacc agagtaacct gaaggtatct ttccaaggca
     2221 tcactatcaa tatttcaccc ctcgacatta aattaaaaat gagggaaatt ctatactgtc
     2281 cttcaagata ttgacctcgg ttgaataaaa tgtgtagggt tatttatctt cgtcagaaca
     2341 tggaaatttc cgaatgaaat atttactagc acaggaaaaa aaaaaagcga aaccacacag
     2401 actttcttca ttcccagctt cttttgctct cggtatgtgt gtgagatacc ctggagccag
     2461 tgcaaattac aaaaactgta ttagttaaaa cagctttgcc aaaggttctc gttcatctta
     2521 gaatatgcgg aaacacccaa cgtgacagaa tcaaggttac ttggagaagt catgtttgtc
     2581 ttaaaaaaaa aaaa
//
