LOCUS       NM_183316                734 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus small nuclear RNA activating complex, polypeptide 5
            (Snapc5), mRNA.
ACCESSION   NM_183316 NM_025925
VERSION     NM_183316.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Miyamoto-Sato,E., Ishizaka,M., Horisawa,K., Tateyama,S.,
            Takashima,H., Fuse,S., Sue,K., Hirai,N., Masuoka,K. and Yanagawa,H.
  TITLE     Cell-free cotranslation and selection using in vitro virus for
            high-throughput analysis of protein-protein interactions and
            complexes
  JOURNAL   Genome Res 15 (5), 710-717 (2005)
   PUBMED   15867431
REFERENCE   2  (bases 1 to 734)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC160118.2.
            
            On or before Jun 13, 2022 this sequence version replaced
            NM_025925.1, NM_183316.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CA490910.1, CJ165093.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-124               AC160118.2         81172-81295
            125-214             AC160118.2         82374-82463
            215-734             AC160118.2         84017-84536
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 34.54 cM"
     gene            1..734
                     /gene="Snapc5"
                     /gene_synonym="2010103A03Rik"
                     /note="small nuclear RNA activating complex, polypeptide
                     5"
                     /db_xref="GeneID:330959"
                     /db_xref="MGI:MGI:1914282"
     exon            1..124
                     /gene="Snapc5"
                     /gene_synonym="2010103A03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            125..214
                     /gene="Snapc5"
                     /gene_synonym="2010103A03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            215..734
                     /gene="Snapc5"
                     /gene_synonym="2010103A03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      727..732
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Snapc5"
                     /gene_synonym="2010103A03Rik"
                     /note="hexamer: AATAAA"
     polyA_site      734
                     /gene="Snapc5"
                     /gene_synonym="2010103A03Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtagaaggc agcgccctaa ggaagtggaa ggggatgttg agtcgactgc aggagctccg
       61 caaggaggag gaaaccctgc tgcgtctaaa ggcggctcta cacgaccaac tgaaccgcct
      121 caaggttgaa gaattagccc ttcaatccat gataaattct cgaggaagga ccgagacact
      181 gtcttctcag cctgcacctg aacagttatg tgatatgtcc ctacatgtag acaacgaagt
      241 gacaataaat cagactacac tgaagctgag cacaaggagc cctatggaag aagaggagga
      301 ggaagaggag gaggaagagg aggaggaaga atctgattcg taaaggggga tcaagggcag
      361 ggtagttata caaactaagt cttgggtgct tcatctcttc aaagtcatct tgcagggcct
      421 atgtgaaaga taaacttatg aatggaagag gctcagccca taaagtatct atattcaaat
      481 atgaagagct gagtttggag ccccagaatc tgtgtaaaaa catagagtgt cacatgcctg
      541 taaccccagc actggggata ggaagaacaa cagatcccag aagcacactg gccagcctgt
      601 ctagccaaac cagtgagttc tgattcactc agagacctgt ctgaagagaa cagttataat
      661 ggcatagagg cccagcacat ctcaatccca gcacacaaga aaagggatta aatagcaagc
      721 tgcaaaaata aaaa
//
