LOCUS       XM_036156919            2352 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus synaptosomal-associated protein, 47
            (Snap47), transcript variant X6, mRNA.
ACCESSION   XM_036156919
VERSION     XM_036156919.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2352
                     /gene="Snap47"
                     /gene_synonym="1110031B06Rik; SNAP-47"
                     /note="synaptosomal-associated protein, 47; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 mRNAs, 31 ESTs, 2862 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:67826"
                     /db_xref="MGI:MGI:1915076"
     CDS             588..1829
                     /gene="Snap47"
                     /gene_synonym="1110031B06Rik; SNAP-47"
                     /codon_start=1
                     /product="synaptosomal-associated protein 47 isoform X1"
                     /protein_id="XP_036012812.1"
                     /db_xref="GeneID:67826"
                     /db_xref="MGI:MGI:1915076"
                     /translation="MSSDMRVHSWSCSYYLDLEKQWVSGKLTLTPHSLKFIVEKTEEV
                     LVGLPLSSIIEIRKESSLFIFGAITVLEKGQTKHWFSSLQPSRNVVFNVIEHFWRELL
                     LSQPGTAANIPSHVTRGQELIGLMANSQKRMEDTAKDLQQQSEQLDSVLKGLEKMESD
                     LDVADRLLTELETPSWWPFGSKFWKMPAEENLKEGVSSTCEPFGKEGVVITVPAIISE
                     RAESHSKLGKLTVLVSALEIYDSCSLLLHRFEKEDVDDIKVHSPYEVSIRQRFIGKPD
                     VAYQLISAKMPEVIPILEVQFSSKIELLEDALVLRNKVFASSAERHAASRPKGCTPHR
                     ELPTGGQEGEQLQLQKNLPLFSEGEAQELTQILSKMKGLALDTEAELERQDAALDGIT
                     VAVDRATLNVDKQNRRMRKLM"
ORIGIN      
        1 gtttctctgt gtagccctgg ctgtccttga attcactctg tagaccagag gtacccctgt
       61 ctctgctttc caagtgctag aatcaaaggt gtttgctact gtgcctggtt taactagatt
      121 tatagtaggc ttgtaaactg acgaagttct taaggggaat ttctggtaag tagtctctta
      181 ttaaaactat aatgacatgg agaggttgga aagcctttgg cttctattga cttaacagac
      241 caccagcttc taccaaaccc aaagctagga atgccatcgg gtaacaccga ggcctagaga
      301 acagcatttt ccatttgctg tagccgcaat agactcttac aagtccactg acacattttt
      361 atctttgcct tgacttataa aactccatga aacggcttcc actttggaac atggaatttg
      421 gggtaaccta aatctgtgtt gttggaccct ggtcactcaa aatggctcca gaagaaacat
      481 ctgttaatta tatttaagtg acatcaggct gtaaacttcc tggctgtttc tcatggagcc
      541 ttcctgagat actgcagcct ctgggtagcc cagcaaccta ggaacagatg agttctgata
      601 tgcgtgtcca ctcctggtct tgttcctact atctggacct tgagaagcaa tgggtttctg
      661 gaaaactgac cctgactcct cattcactga agttcattgt ggaaaaaaca gaagaggtcc
      721 ttgttggcct gcccctctcc agcatcattg agatcaggaa agagtcatct ctctttatct
      781 tcggtgcgat cacagtcctg gagaagggcc agaccaagca ctggttcagc tcactgcagc
      841 ctagtcgaaa tgtggtcttc aacgtcatcg aacatttctg gagggagctg ctactgtccc
      901 agccaggcac tgctgccaac ataccctccc acgtgaccag gggacaggag ctgataggac
      961 tgatggcaaa ttcccagaaa cgcatggaag acacagcgaa ggatctccag cagcagagcg
     1021 aacagctgga cagcgtcctg aagggcctgg agaagatgga gtccgacctg gacgtggctg
     1081 acagattgct gacagaattg gagacacctt cctggtggcc ttttggctct aagttttgga
     1141 agatgccggc agaagaaaat ctcaaggaag gtgtgtcttc cacttgtgag ccctttggaa
     1201 aggaaggggt tgtgatcacg gtccctgcta ttatttctga gagagcagag tctcattcca
     1261 agctgggaaa gctcactgtc ctggtctccg ctctggaaat ctatgactcc tgctcgttgc
     1321 tcctgcacag atttgagaag gaagatgttg atgatatcaa ggttcactct ccttatgagg
     1381 tcagcatacg ccagcgcttc attgggaagc cagacgtggc ttaccagctg atatctgcca
     1441 agatgccaga ggtcattccc atcttagaag tgcagttcag cagcaagatt gagctcctgg
     1501 aagacgcctt agtgctcagg aacaaggtct ttgcttcctc tgcagagagg catgcagcat
     1561 ccagaccgaa gggctgcact ccacaccgag agctgcccac aggaggacag gaaggcgagc
     1621 agctgcagct gcagaagaac ttgccactgt tctctgaggg ggaagcccag gagctgacac
     1681 agatcctgag caaaatgaag ggactcgcac tggacactga ggcagagctg gaacgccagg
     1741 atgcggctct ggatggcatc accgtagctg tggaccgggc aaccctgaat gtggacaagc
     1801 aaaaccggcg tatgagaaag ctgatgtagt ggggcaagct gtaaacagcc acccctggca
     1861 tggctctgct gattctattg ctattagccc ttttcctttc ccctgagacc cgggaagcca
     1921 ttctgggtac tgtgaaacta tgaggcccta cctgggaact acaccttcct aggatgggcc
     1981 aggagaggcc acaatatgca tgagcatgta tgtttcccgg ggccctaagc atgagggcca
     2041 tgtcctgttc aggcaagaat cgccaccgta gcgtagccat ccttcctgtc cacactgaga
     2101 ccccggcgtt gagctgccat tgtggcatca tgttgtcaca tcatattgtc atcttttcac
     2161 catttttgcc aaacagtaga gaaaaatgtc agtcattctg gtctggctct gccatccact
     2221 tgccagaaac atcaattccc ccttcaaatg ctgctgtagc ccctgccacc ttttcctgat
     2281 catcagttag agttctgtaa ccagtagcct ctgtgtgtgc gtaataaaag aatgtttatt
     2341 cgatgactta ca
//
