LOCUS       XM_030246252            2003 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus synaptosomal-associated protein, 47
            (Snap47), transcript variant X5, mRNA.
ACCESSION   XM_030246252
VERSION     XM_030246252.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030246252.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2003
                     /gene="Snap47"
                     /gene_synonym="1110031B06Rik; SNAP-47"
                     /note="synaptosomal-associated protein, 47; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 mRNAs, 31 ESTs, 3055 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:67826"
                     /db_xref="MGI:MGI:1915076"
     CDS             239..1480
                     /gene="Snap47"
                     /gene_synonym="1110031B06Rik; SNAP-47"
                     /codon_start=1
                     /product="synaptosomal-associated protein 47 isoform X1"
                     /protein_id="XP_030102112.1"
                     /db_xref="GeneID:67826"
                     /db_xref="MGI:MGI:1915076"
                     /translation="MSSDMRVHSWSCSYYLDLEKQWVSGKLTLTPHSLKFIVEKTEEV
                     LVGLPLSSIIEIRKESSLFIFGAITVLEKGQTKHWFSSLQPSRNVVFNVIEHFWRELL
                     LSQPGTAANIPSHVTRGQELIGLMANSQKRMEDTAKDLQQQSEQLDSVLKGLEKMESD
                     LDVADRLLTELETPSWWPFGSKFWKMPAEENLKEGVSSTCEPFGKEGVVITVPAIISE
                     RAESHSKLGKLTVLVSALEIYDSCSLLLHRFEKEDVDDIKVHSPYEVSIRQRFIGKPD
                     VAYQLISAKMPEVIPILEVQFSSKIELLEDALVLRNKVFASSAERHAASRPKGCTPHR
                     ELPTGGQEGEQLQLQKNLPLFSEGEAQELTQILSKMKGLALDTEAELERQDAALDGIT
                     VAVDRATLNVDKQNRRMRKLM"
ORIGIN      
        1 gtcttctgcg tgctcctctt gcctcaggtg agctgctacc gcgcagctag ccagtaccgg
       61 agcccgccac cgacacagga gatgaacatc agtctcaaac ctcaaaggat gactgggtcc
      121 tgagaggatg ctggggcgca gagcgggcgt gacatcaggc tgtaaacttc ctggctgttt
      181 ctcatggagc cttcctgaga tactgcagcc tctgggtagc ccagcaacct aggaacagat
      241 gagttctgat atgcgtgtcc actcctggtc ttgttcctac tatctggacc ttgagaagca
      301 atgggtttct ggaaaactga ccctgactcc tcattcactg aagttcattg tggaaaaaac
      361 agaagaggtc cttgttggcc tgcccctctc cagcatcatt gagatcagga aagagtcatc
      421 tctctttatc ttcggtgcga tcacagtcct ggagaagggc cagaccaagc actggttcag
      481 ctcactgcag cctagtcgaa atgtggtctt caacgtcatc gaacatttct ggagggagct
      541 gctactgtcc cagccaggca ctgctgccaa cataccctcc cacgtgacca ggggacagga
      601 gctgatagga ctgatggcaa attcccagaa acgcatggaa gacacagcga aggatctcca
      661 gcagcagagc gaacagctgg acagcgtcct gaagggcctg gagaagatgg agtccgacct
      721 ggacgtggct gacagattgc tgacagaatt ggagacacct tcctggtggc cttttggctc
      781 taagttttgg aagatgccgg cagaagaaaa tctcaaggaa ggtgtgtctt ccacttgtga
      841 gccctttgga aaggaagggg ttgtgatcac ggtccctgct attatttctg agagagcaga
      901 gtctcattcc aagctgggaa agctcactgt cctggtctcc gctctggaaa tctatgactc
      961 ctgctcgttg ctcctgcaca gatttgagaa ggaagatgtt gatgatatca aggttcactc
     1021 tccttatgag gtcagcatac gccagcgctt cattgggaag ccagacgtgg cttaccagct
     1081 gatatctgcc aagatgccag aggtcattcc catcttagaa gtgcagttca gcagcaagat
     1141 tgagctcctg gaagacgcct tagtgctcag gaacaaggtc tttgcttcct ctgcagagag
     1201 gcatgcagca tccagaccga agggctgcac tccacaccga gagctgccca caggaggaca
     1261 ggaaggcgag cagctgcagc tgcagaagaa cttgccactg ttctctgagg gggaagccca
     1321 ggagctgaca cagatcctga gcaaaatgaa gggactcgca ctggacactg aggcagagct
     1381 ggaacgccag gatgcggctc tggatggcat caccgtagct gtggaccggg caaccctgaa
     1441 tgtggacaag caaaaccggc gtatgagaaa gctgatgtag tggggcaagc tgtaaacagc
     1501 cacccctggc atggctctgc tgattctatt gctattagcc cttttccttt cccctgagac
     1561 ccgggaagcc attctgggta ctgtgaaact atgaggccct acctgggaac tacaccttcc
     1621 taggatgggc caggagaggc cacaatatgc atgagcatgt atgtttcccg gggccctaag
     1681 catgagggcc atgtcctgtt caggcaagaa tcgccaccgt agcgtagcca tccttcctgt
     1741 ccacactgag accccggcgt tgagctgcca ttgtggcatc atgttgtcac atcatattgt
     1801 catcttttca ccatttttgc caaacagtag agaaaaatgt cagtcattct ggtctggctc
     1861 tgccatccac ttgccagaaa catcaattcc cccttcaaat gctgctgtag cccctgccac
     1921 cttttcctga tcatcagtta gagttctgta accagtagcc tctgtgtgtg cgtaataaaa
     1981 gaatgtttat tcgatgactt aca
//
