LOCUS       XM_030246251            2063 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus synaptosomal-associated protein, 47
            (Snap47), transcript variant X4, mRNA.
ACCESSION   XM_030246251
VERSION     XM_030246251.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030246251.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2063
                     /gene="Snap47"
                     /gene_synonym="1110031B06Rik; SNAP-47"
                     /note="synaptosomal-associated protein, 47; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 mRNAs, 31 ESTs, 3056 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 12 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:67826"
                     /db_xref="MGI:MGI:1915076"
     CDS             299..1540
                     /gene="Snap47"
                     /gene_synonym="1110031B06Rik; SNAP-47"
                     /codon_start=1
                     /product="synaptosomal-associated protein 47 isoform X1"
                     /protein_id="XP_030102111.1"
                     /db_xref="GeneID:67826"
                     /db_xref="MGI:MGI:1915076"
                     /translation="MSSDMRVHSWSCSYYLDLEKQWVSGKLTLTPHSLKFIVEKTEEV
                     LVGLPLSSIIEIRKESSLFIFGAITVLEKGQTKHWFSSLQPSRNVVFNVIEHFWRELL
                     LSQPGTAANIPSHVTRGQELIGLMANSQKRMEDTAKDLQQQSEQLDSVLKGLEKMESD
                     LDVADRLLTELETPSWWPFGSKFWKMPAEENLKEGVSSTCEPFGKEGVVITVPAIISE
                     RAESHSKLGKLTVLVSALEIYDSCSLLLHRFEKEDVDDIKVHSPYEVSIRQRFIGKPD
                     VAYQLISAKMPEVIPILEVQFSSKIELLEDALVLRNKVFASSAERHAASRPKGCTPHR
                     ELPTGGQEGEQLQLQKNLPLFSEGEAQELTQILSKMKGLALDTEAELERQDAALDGIT
                     VAVDRATLNVDKQNRRMRKLM"
ORIGIN      
        1 gctcctcttg cctcaggtga gctgctaccg cgcagctagc cagtaccgga gcccgccacc
       61 gacacaggag atgaacatca gtctcaaacc tcaaaggatg actgggtcct gagaggatgc
      121 tggggcgcag agcgggcgaa agacaaagca cccttctata cagaaggaag tgtctcctgc
      181 agctgagaaa atctccccca cttttccagt gacatcaggc tgtaaacttc ctggctgttt
      241 ctcatggagc cttcctgaga tactgcagcc tctgggtagc ccagcaacct aggaacagat
      301 gagttctgat atgcgtgtcc actcctggtc ttgttcctac tatctggacc ttgagaagca
      361 atgggtttct ggaaaactga ccctgactcc tcattcactg aagttcattg tggaaaaaac
      421 agaagaggtc cttgttggcc tgcccctctc cagcatcatt gagatcagga aagagtcatc
      481 tctctttatc ttcggtgcga tcacagtcct ggagaagggc cagaccaagc actggttcag
      541 ctcactgcag cctagtcgaa atgtggtctt caacgtcatc gaacatttct ggagggagct
      601 gctactgtcc cagccaggca ctgctgccaa cataccctcc cacgtgacca ggggacagga
      661 gctgatagga ctgatggcaa attcccagaa acgcatggaa gacacagcga aggatctcca
      721 gcagcagagc gaacagctgg acagcgtcct gaagggcctg gagaagatgg agtccgacct
      781 ggacgtggct gacagattgc tgacagaatt ggagacacct tcctggtggc cttttggctc
      841 taagttttgg aagatgccgg cagaagaaaa tctcaaggaa ggtgtgtctt ccacttgtga
      901 gccctttgga aaggaagggg ttgtgatcac ggtccctgct attatttctg agagagcaga
      961 gtctcattcc aagctgggaa agctcactgt cctggtctcc gctctggaaa tctatgactc
     1021 ctgctcgttg ctcctgcaca gatttgagaa ggaagatgtt gatgatatca aggttcactc
     1081 tccttatgag gtcagcatac gccagcgctt cattgggaag ccagacgtgg cttaccagct
     1141 gatatctgcc aagatgccag aggtcattcc catcttagaa gtgcagttca gcagcaagat
     1201 tgagctcctg gaagacgcct tagtgctcag gaacaaggtc tttgcttcct ctgcagagag
     1261 gcatgcagca tccagaccga agggctgcac tccacaccga gagctgccca caggaggaca
     1321 ggaaggcgag cagctgcagc tgcagaagaa cttgccactg ttctctgagg gggaagccca
     1381 ggagctgaca cagatcctga gcaaaatgaa gggactcgca ctggacactg aggcagagct
     1441 ggaacgccag gatgcggctc tggatggcat caccgtagct gtggaccggg caaccctgaa
     1501 tgtggacaag caaaaccggc gtatgagaaa gctgatgtag tggggcaagc tgtaaacagc
     1561 cacccctggc atggctctgc tgattctatt gctattagcc cttttccttt cccctgagac
     1621 ccgggaagcc attctgggta ctgtgaaact atgaggccct acctgggaac tacaccttcc
     1681 taggatgggc caggagaggc cacaatatgc atgagcatgt atgtttcccg gggccctaag
     1741 catgagggcc atgtcctgtt caggcaagaa tcgccaccgt agcgtagcca tccttcctgt
     1801 ccacactgag accccggcgt tgagctgcca ttgtggcatc atgttgtcac atcatattgt
     1861 catcttttca ccatttttgc caaacagtag agaaaaatgt cagtcattct ggtctggctc
     1921 tgccatccac ttgccagaaa catcaattcc cccttcaaat gctgctgtag cccctgccac
     1981 cttttcctga tcatcagtta gagttctgta accagtagcc tctgtgtgtg cgtaataaaa
     2041 gaatgtttat tcgatgactt aca
//
