LOCUS       NM_023348               3432 bp    mRNA    linear   ROD 17-DEC-2024
DEFINITION  Mus musculus synaptosomal-associated protein 29 (Snap29), mRNA.
ACCESSION   NM_023348
VERSION     NM_023348.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3432)
  AUTHORS   Vong,K.I., Lee,S., Au,K.S., Crowley,T.B., Capra,V., Martino,J.,
            Haller,M., Araujo,C., Machado,H.R., George,R., Gerding,B.,
            James,K.N., Stanley,V., Jiang,N., Alu,K., Meave,N., Nidhiry,A.S.,
            Jiwani,F., Tang,I., Nisal,A., Jhamb,I., Patel,A., Patel,A.,
            McEvoy-Venneri,J., Barrows,C., Shen,C., Ha,Y.J., Howarth,R.,
            Strain,M., Ashley-Koch,A.E., Azam,M., Mumtaz,S., Bot,G.M.,
            Finnell,R.H., Kibar,Z., Marwan,A.I., Melikishvili,G., Meltzer,H.S.,
            Mutchinick,O.M., Stevenson,D.A., Mroczkowski,H.J., Ostrander,B.,
            Schindewolf,E., Moldenhauer,J., Zackai,E.H., Emanuel,B.S.,
            Garcia-Minaur,S., Nowakowska,B.A., Stevenson,R.E., Zaki,M.S.,
            Northrup,H., McNamara,H.K., Aldinger,K.A., Phelps,I.G., Deng,M.,
            Glass,I.A., Morrow,B., McDonald-McGinn,D.M., Sanna-Cherchi,S.,
            Lamb,D.J. and Gleeson,J.G.
  CONSRTM   Spina Bifida Sequencing Consortiumdouble dagger
  TITLE     Risk of meningomyelocele mediated by the common 22q11.2 deletion
  JOURNAL   Science 384 (6695), 584-590 (2024)
   PUBMED   38696583
REFERENCE   2  (bases 1 to 3432)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 3432)
  AUTHORS   Jia,Y., Guo,Z., Zhu,J., Qin,G., Sun,W., Yin,Y., Wang,H. and Guo,R.
  TITLE     Snap29 Is Dispensable for Self-Renewal Maintenance but Required for
            Proper Differentiation of Mouse Embryonic Stem Cells
  JOURNAL   Int J Mol Sci 24 (1), 750 (2023)
   PUBMED   36614195
  REMARK    GeneRIF: Snap29 Is Dispensable for Self-Renewal Maintenance but
            Required for Proper Differentiation of Mouse Embryonic Stem Cells.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3432)
  AUTHORS   Martinez-Ramirez,A.S., Borders,T.L., Paul,L., Schipma,M., Wang,X.,
            Korobova,F., Wright,C.V. and Sosa-Pineda,B.
  TITLE     Specific Temporal Requirement of Prox1 Activity During Pancreatic
            Acinar Cell Development
  JOURNAL   Gastro Hep Adv 1 (5), 807-823 (2022)
   PUBMED   37829188
REFERENCE   5  (bases 1 to 3432)
  AUTHORS   Yan,W., Fan,J., Zhang,X., Song,H., Wan,R., Wang,W. and Yin,Y.
  TITLE     Decreased neuronal synaptosome associated protein 29 contributes to
            poststroke cognitive impairment by disrupting presynaptic
            maintenance
  JOURNAL   Theranostics 11 (10), 4616-4636 (2021)
   PUBMED   33754017
  REMARK    GeneRIF: Decreased neuronal synaptosome associated protein 29
            contributes to poststroke cognitive impairment by disrupting
            presynaptic maintenance.
            Publication Status: Online-Only
REFERENCE   6  (bases 1 to 3432)
  AUTHORS   Corradini,I., Donzelli,A., Antonucci,F., Welzl,H., Loos,M.,
            Martucci,R., De Astis,S., Pattini,L., Inverardi,F., Wolfer,D.,
            Caleo,M., Bozzi,Y., Verderio,C., Frassoni,C., Braida,D.,
            Clerici,M., Lipp,H.P., Sala,M. and Matteoli,M.
  TITLE     Epileptiform activity and cognitive deficits in SNAP-25(+/-) mice
            are normalized by antiepileptic drugs
  JOURNAL   Cereb Cortex 24 (2), 364-376 (2014)
   PUBMED   23064108
REFERENCE   7  (bases 1 to 3432)
  AUTHORS   Schardt,A., Brinkmann,B.G., Mitkovski,M., Sereda,M.W., Werner,H.B.
            and Nave,K.A.
  TITLE     The SNARE protein SNAP-29 interacts with the GTPase Rab3A:
            Implications for membrane trafficking in myelinating glia
  JOURNAL   J Neurosci Res 87 (15), 3465-3479 (2009)
   PUBMED   19170188
  REMARK    GeneRIF: We suggest that Rab3A may regulate SNAP-29-mediated
            membrane fusion during myelination.
REFERENCE   8  (bases 1 to 3432)
  AUTHORS   Holt,M., Varoqueaux,F., Wiederhold,K., Takamori,S., Urlaub,H.,
            Fasshauer,D. and Jahn,R.
  TITLE     Identification of SNAP-47, a novel Qbc-SNARE with ubiquitous
            expression
  JOURNAL   J Biol Chem 281 (25), 17076-17083 (2006)
   PUBMED   16621800
REFERENCE   9  (bases 1 to 3432)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   10 (bases 1 to 3432)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC110573.11, AK007065.1, AK005042.1, AK039203.1 and BB763685.1.
            
            On Apr 4, 2007 this sequence version replaced NM_023348.3.
            
            Sequence Note: The 5' end of the RefSeq transcript is derived from
            genomic sequence in order to represent sequence for the C57BL/6J
            strain. The extension is based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK039203.1, AK005042.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-14                AC110573.11        7316-7329           c
            15-51               AK007065.1         8-44
            52-670              AK005042.1         2-620
            671-3089            AK039203.1         640-3058
            3090-3429           AK005042.1         3039-3378
            3430-3432           BB763685.1         462-464
FEATURES             Location/Qualifiers
     source          1..3432
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 10.79 cM"
     gene            1..3432
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /note="synaptosomal-associated protein 29"
                     /db_xref="GeneID:67474"
                     /db_xref="MGI:MGI:1914724"
     exon            1..360
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /inference="alignment:Splign:2.1.0"
     CDS             124..906
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /note="SNAP-29; golgi SNARE of 32 kDa; soluble 29 kDa NSF
                     attachment protein; vesicle-membrane fusion protein
                     SNAP-29"
                     /codon_start=1
                     /product="synaptosomal-associated protein 29"
                     /protein_id="NP_075837.3"
                     /db_xref="CCDS:CCDS28001.1"
                     /db_xref="GeneID:67474"
                     /db_xref="MGI:MGI:1914724"
                     /translation="MSGYPKSYNPFDDDVEEEDTRPAPWKDVRDLPDGPDAPIDRQQY
                     LRQEVLRRAEATAASTSRSLSLMYESEKIGVASSEELVRQRGVLEHTEKMVDKMDQDL
                     KMSQKHINSIKSVFGGFINYFKSKPVEPPPEQNGSIVSQPNSRLKEAINTSKDQENKY
                     QASHPNLRRLQDAELDSVPKEPSSTVNTEVYPKNSTLRTYHQKIDSNLDELSVGLGHL
                     KDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKVRQL"
     exon            361..557
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /inference="alignment:Splign:2.1.0"
     exon            558..643
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /inference="alignment:Splign:2.1.0"
     exon            644..748
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /inference="alignment:Splign:2.1.0"
     exon            749..3432
                     /gene="Snap29"
                     /gene_synonym="1300018G05Rik; Gs32"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcgcagtgc tggcggaagt agtgcgcgcg gcgtccacag tgaatccgcc cgccggcgct
       61 gggctatcga ctcctcgctc agcaacccct cctgcttcct aggtgcaggc cgtctcccgc
      121 accatgtctg gctatcctaa aagctataat cctttcgacg atgacgtgga agaggaagac
      181 acccggcccg cgccgtggaa ggacgtccgc gacctgcctg acggccccga cgcgcccatt
      241 gacaggcagc agtacctgag acaggaggtg ttgcgcaggg ccgaggctac cgctgccagt
      301 accagcaggt ccttgtctct catgtatgaa tcggagaaga tcggagtcgc ctcttccgag
      361 gagctggtcc ggcagcgagg agtcctagaa cacacagaga agatggtaga caagatggat
      421 caggatttga agatgagcca gaaacatatc aacagcatta agagtgtgtt tggaggattt
      481 atcaactact tcaaatccaa accagtagag cctccacctg agcagaatgg cagcatcgtc
      541 tcccagccca acagcagatt gaaagaagcc ataaatacaa gtaaagacca ggaaaacaag
      601 taccaagcca gccacccaaa cctcagaagg ctacaggatg cagaactaga ctcggtcccc
      661 aaagaacctt cttctactgt gaatactgag gtttacccaa agaactcgac ccttcgaact
      721 tatcaccaga agattgacag caacctagat gagctgtccg tgggattagg ccacctgaag
      781 gacatagcct tgggaatgca gacagaaatt gaggaacagg atgacatcct tgaccgactg
      841 acaaccaaag tggacaagct agatgtcaat ataaaaagca cagaaaaaaa agtgcggcaa
      901 ctctagagac acggaggagg aactctgctc catcctgatg agaagattcg aaaggctctc
      961 ttaaactcat ggatgtcact tattacaagt gtataatata acgtgttttc aaatgtgggt
     1021 ctttgaaata ttagtttcaa tgggggaaaa aatgtgtgtt ccacatttgg taagaccagt
     1081 agttctaaaa ttattgagct gttctgctga gttttagtct aagctgagta actgtgaaca
     1141 ccttgagcct ttgatcacta tgctggaagg agaaaaagta ctgcatttct gatttcatgt
     1201 gtgtctgcaa agccacgggc agagtgtcag aactactgcc tttcatttac ccatttgtta
     1261 tgtttctcac tccgaggcct tactgtgaat tcagatgtga aaggaccctg ggtttgtgac
     1321 agaagaacag gtccttccac atctttatat gacaagtctt gtggacatgc ctgcacacac
     1381 actgagcaca tggcagctct ctcccctgaa aaggatccat gttcatacag aacggaaatg
     1441 tgttgccttc attgtcccta tccccatctt ctgttcttgt cctgcacttt agcagaagga
     1501 ctcagagcag aactgttagg cccctcttct cacctgttct cacctcatct ttccatctct
     1561 gatggggact ttctccactg gctcaaagcc aactggtagg ttggtttgtg tgcatggagt
     1621 attactgagc cctctgcctc tgggaataga accaaaggcc ttgtttattc ggtgcctgga
     1681 gtctcctcat ccatcccaga ttcccatgca ttctccatag ctacgaagtg ttccacctag
     1741 tttagggact tcgactccac aaatgatgct aaccttctgt ctgtcagatg attcgaccaa
     1801 aaggcccaga gactatctta gctagcttgt gtccactccc ttcagtttcc aaaagaaaat
     1861 atttagaagt attaattaaa attgattctt gcaagaattt ttccttgtac tgccaataaa
     1921 gtcactgaag ccacagaaca cctgactatc ttaaaatcaa actcacatat tttgaagaag
     1981 gtaaaagaga cttactagta gatatgtcaa aatctataat gctggtgcct tcttgcctta
     2041 aaacttggct catgtgccat ttgaggatcc ttccttttgc atctggagtc tgcagtacct
     2101 taaagcaaag caagcagtgg gttcatctca gtggtcagtt atctactctt ctctctcggg
     2161 gcctggggtt ggtctccacc attgaggaga ggatcagaaa atggggtaac aggattatta
     2221 ctgttcatgt agcaatatgt acacactctt gtcaaaaatt atccaacctt tctgaaaata
     2281 cagcaaccac agggagaaag ggcccaaatc tgaaatctga ctgaagtgga cctctgtgag
     2341 ttccaggaca gccaggacga tatactaaga tctgtctcaa acaatataga gagactgatc
     2401 catatgtatt tccactaatt ggttttgttt tgtttttttc tataaaacct tccaagtgtt
     2461 ataactgttt ctcttcatca ctatcaggca tagcctttta gaaattgatc aatatacctc
     2521 agtcctaaga aatttacaca tgagaatgcc ttccatggtc atcctagtgt aaatcagcta
     2581 acttgaggca aagggacatt ttatgtacct ttctttgttt tgctaaatta atgaagccaa
     2641 tcaccccttt cccaatcttt ttttgctcca tgaacatgaa acagtcttcc tgtaaccatt
     2701 agaggtcctc atccagtctg ttcttcagac tctgtggtcc actgaagtta tcccttggcc
     2761 tgctggagac tggctgaggc agatgctgcc ttacaaagca gggttgtttg gaagacacag
     2821 atacaaagga cttggggaaa ctccagagcc agatctgctg gctgacacag taatcacagc
     2881 acttaggcca aggcagaagg gtaaccatga gttccaggtt cagggtgaga tcttgtctca
     2941 ccctgaatat cagtggttgt gtgtgtgtcg gggggagggg ggtgaaggtg ggcagggagg
     3001 gagggaagaa agactcactc ctgcgctctg gcttaggaag agttagtgtt ggcgaggtgg
     3061 caggcagaag tggaatggac tttctgtctc acagaccagt gaacatatcc ttgtcatgtg
     3121 aggtctgcaa gacagactga agcaccctac cttcagaaag gtggcatttg taactttagg
     3181 ttagctatgt gtatgtgtgc taccaaaaca agtgcattgt cctctggaga agactaaccg
     3241 ttactgacgt gtaacttagc agcattagag tgacgtcttc agttggtttt cctcattctg
     3301 taggagaggc ctgatgttca ttcatgtaac aagtaaaaca agagagcaga gagtcttaat
     3361 ttccctttct cttcttataa atgtgcaatt ttaagtgtat aatgtatcac ttcagtaaaa
     3421 aaaaaaaaat ct
//
