LOCUS       NM_177776               2624 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus smoothelin-like 2 (Smtnl2), mRNA.
ACCESSION   NM_177776
VERSION     NM_177776.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Wu,D., Zhang,K., Khan,F.A., Pandupuspitasari,N.S., Liang,W.,
            Huang,C. and Sun,F.
  TITLE     Smtnl2 regulates apoptotic germ cell clearance and lactate
            metabolism in mouse Sertoli cells
  JOURNAL   Mol Cell Endocrinol 551, 111664 (2022)
   PUBMED   35551947
  REMARK    GeneRIF: Smtnl2 regulates apoptotic germ cell clearance and lactate
            metabolism in mouse Sertoli cells.
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Yorgan,T.A., Peters,S., Amling,M. and Schinke,T.
  TITLE     Osteoblast-specific expression of Panx3 is dispensable for
            postnatal bone remodeling
  JOURNAL   Bone 127, 155-163 (2019)
   PUBMED   31202927
REFERENCE   3  (bases 1 to 2624)
  AUTHORS   Narumiya,H., Hidaka,K., Shirai,M., Terami,H., Aburatani,H. and
            Morisaki,T.
  TITLE     Endocardiogenesis in embryoid bodies: novel markers identified by
            gene expression profiling
  JOURNAL   Biochem Biophys Res Commun 357 (4), 896-902 (2007)
   PUBMED   17462595
REFERENCE   4  (bases 1 to 2624)
  AUTHORS   Takasato,M., Osafune,K., Matsumoto,Y., Kataoka,Y., Yoshida,N.,
            Meguro,H., Aburatani,H., Asashima,M. and Nishinakamura,R.
  TITLE     Identification of kidney mesenchymal genes by a combination of
            microarray analysis and Sall1-GFP knockin mice
  JOURNAL   Mech Dev 121 (6), 547-557 (2004)
   PUBMED   15172686
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL662812.12.
            
            On Nov 17, 2006 this sequence version replaced NM_177776.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC037993.1, AK051585.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-470               AL662812.12        28935-29404         c
            471-558             AL662812.12        21608-21695         c
            559-798             AL662812.12        20702-20941         c
            799-874             AL662812.12        20116-20191         c
            875-1054            AL662812.12        19039-19218         c
            1055-1172           AL662812.12        18020-18137         c
            1173-1324           AL662812.12        17565-17716         c
            1325-2624           AL662812.12        7805-9104           c
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 44.15 cM"
     gene            1..2624
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /note="smoothelin-like 2"
                     /db_xref="GeneID:276829"
                     /db_xref="MGI:MGI:2442764"
     exon            1..470
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            471..558
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            559..798
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            799..874
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1054
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1055..1172
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..1324
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..2624
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2602..2607
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /note="hexamer: GATAAA"
     polyA_site      2619
                     /gene="Smtnl2"
                     /gene_synonym="D130058I21Rik"
                     /note="major polyA site"
ORIGIN      
        1 ccagtcgtcc caaggagctg cggatctctc aacgtctccc gcgttctgcc cgctgtccga
       61 tcggtgtgcc ccactcggcc atggagccgt cccccgacgc cgaggaggcg cacacagtgc
      121 gcgaggcgct gggccgctac gaggcggcgc tggagggtgc ggtgcgtgcg ctgcacgagg
      181 acatgcaggg gctgcagcgc ggcgtggagc ggcgcgtggc agaggcgctg cgcctggccg
      241 gccccttggc tcgtactgtg gccgagctgc agcgggacaa ccagcggctg caggcacagc
      301 tcgaacgctt gacgcgccag gtggaggcgc tgggcttggc gactggagtg tcccctgcac
      361 ccggcacgcc cagtccccct ccggcggcca cagttaccga ccgcgccccc cgcttgggca
      421 ctgcacgctt ctccagtcat gccacctttt cgctgtccgg tcgaagcccg agcgtggaac
      481 atgatgaagc cagtgacctt gaggtgagac gtgcttcaaa ttcatgcatc ttggagaacg
      541 gacaccagct ggatgcaggt ccagccaacg gatcctctga ggtccaaacc tcgtcagccc
      601 aggagccccc gaggccacgc cctgtgagcc tctccttgcg gatgccccac cagcccgtca
      661 cagctgtcac ccgagtctcc gagaaattct ctggggagac ctcagcttca gctctgtcac
      721 ccacatctgc tgccattgtg gggggcttca ccccaagccc tagtgaggcc atcagccctt
      781 ggactcccag tcccactgag aaaagttcct ctttcactcg gtctttgtct ggctctgggt
      841 atggagcagt gacggctggc aaacgcaagg acagccctcc actggtgacc ccaccacagt
      901 cacccccatc ctcgcagccc ccagctatga ctcaggcccc tcgccaggga gagcgtcgca
      961 gggaactggt gaggtcgcag acgctgcctc ggacttcagg ggcacaggct cgaaaggcgc
     1021 tgtttgagaa gtgggagcag gatacggcga gcaagggcaa aggtgagacc agggccaaac
     1081 taaaaaggtc acagagtttc ggtgtggcca gtgccagcag catcaaacag atcctgctag
     1141 agtggtgccg cagcaagact gtgggctatc agcacgtgga cctgcagaat ttctcctcca
     1201 gctggagtga cggcatggcc ttctgtgccc tggtgcactc cttcttccct gatgccttcg
     1261 actacaatgc cctgagtccc acacaaaggc agaagaactt cgaactggcc ttcaccatgg
     1321 ctgagaatct ggccaactgt gagcgcctca ttgaagtgga ggatatgatg gtgatgggcc
     1381 gcaagccgga ccccatgtgt gtcttcacct atgtgcagtc gctctacaac caccttcgtc
     1441 gctttgagta aagccggcgg cccggagtgg ccaggaagag actctgaggt ccctcacgtt
     1501 ccccccatgg cagcatgatc cacacgaggg aagctgcctc tctggtgtga gctgctattc
     1561 gctctctggc gtgtgaccat gtgcccctca cactcgttac tgattaaaag tattgatgag
     1621 gctaagctga gccccacagt ccctccacag gctggaagga gaaggaaaaa ctccagagtc
     1681 aaaagaaatt ggtgctaagt tatgatcttc ctacagggag cgctcatggt ttccctctgg
     1741 tgaatttgat atattggctt gacagggttc cactgattat caagctttct ttcttttttc
     1801 ctatcaaagt acccagaggt tgtttttgtt tttttaactt cctcacactc tctctttttt
     1861 tttttgtttt gtttttggtt tttcgagaca gggtttctct ttatagccct ggctgtcctg
     1921 gaactcactt tgtagaccag gctggccttg aactcagaaa tccgcctgct tctgcctccc
     1981 aagtgctggg attaaaggcg tgcgccacca ccacccctct gggccattgc caagaaacag
     2041 tctctagttc ttgggaagaa acagcttagt cagccccagg tcctatcttc ctatcatctc
     2101 ttctctgtgg ggaggtggca ggatttctac ctagtcctgg acgggcttct ggtactcaca
     2161 ggagacccca caagtgtcca gctaaggaat ggttacctga gcagtaactg agcaggagca
     2221 aggataggtc cttagggatg agagagttcc catttgctcc aggtatttat agaaaaggat
     2281 tgcatctgta ccattgacct gtttgtacac atgtgacctg tttgtaagat gtggtggcac
     2341 tcttcgcttg ggtttgttat ttctgtgtgg gaaatgggag gagggttggg caataagaga
     2401 cggcatagat ttaaacagag atctactgaa atcatacctt tattgtttat gtatttaaaa
     2461 ccacttgcct gggaggctga aagcggcatt tgctgtctac caatgtgctt gtccctcagc
     2521 catctctatg ttgttgaagg attgtgaaca gaaaatttac cccctgccca tctatccctt
     2581 agatattggc aaatatatta tgataaaaag tggcccaaag ttga
//
