LOCUS       NM_001310703            2331 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus sperm motility kinase 3C (Smok3c), mRNA.
ACCESSION   NM_001310703 XM_898397
VERSION     NM_001310703.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125212.3 and AC151719.3.
            
            On Jul 18, 2015 this sequence version replaced XM_898397.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignment of paralogous traanscripts.
            
            CCDS Note: This gene lacks full-length transcript support.
            Therefore this CCDS representation has an inferred exon combination
            based on alignment of paralogous transcripts.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-433               AC125212.3         9464-9896           c
            434-2019            AC151719.3         94399-95984
            2020-2331           AC151719.3         96400-96711
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 76.94 cM"
     gene            1..2331
                     /gene="Smok3c"
                     /gene_synonym="EG622486"
                     /note="sperm motility kinase 3C"
                     /db_xref="GeneID:622486"
                     /db_xref="MGI:MGI:3647925"
     exon            1..433
                     /gene="Smok3c"
                     /gene_synonym="EG622486"
                     /inference="alignment:Splign:2.1.0"
     exon            434..2019
                     /gene="Smok3c"
                     /gene_synonym="EG622486"
                     /inference="alignment:Splign:2.1.0"
     CDS             460..1974
                     /gene="Smok3c"
                     /gene_synonym="EG622486"
                     /codon_start=1
                     /product="sperm motility kinase 3C"
                     /protein_id="NP_001297632.1"
                     /db_xref="CCDS:CCDS80444.1"
                     /db_xref="GeneID:622486"
                     /db_xref="MGI:MGI:3647925"
                     /translation="MGPGSQQKSEKLRCKPPFSNMDGFHAQYVMLETIGHGGCATVKL
                     AQHRLTGTHVAVKTIQKRGYWCILIMSEVDLLMMADHPNVISLLQVIETKKKVYLIME
                     LCEGKSLYQHIRKAGYLQEHEARALFKQLLSAMNYCHNQGIVHRDLKPDNIMVEKDGK
                     VKIIDFGLSTKVKPGQKLNLFCGTYPFSAPEVLLSTPYDGPKIDVWTLGVVLYFMVTG
                     KIPFDACSIKRLVKRILAGKYSIPSRLSAELRDLLSLLMTANPKLRPTVAEVMVHPWV
                     TEGSGVFPDPCEEQTPLKPDPAIVKAMGHIGFQAQDIEDSLRQRKFNQTMASYCLLKK
                     QILKECDRPTRARPVNPSVTPFPSLVDTATTCLGLRRRENEPTCPWSSANRQVSVCGK
                     STSKKRDRRVSWPSVLGRPRHTAPTMDHTRTRTRSVPCICSMFCTVQPNSSEESTQGH
                     TRASAADKPVRSRGWPRGIKGWTRMIGNAMRKLCCCIPSKETSHLGQNRVSPKK"
     exon            2020..2331
                     /gene="Smok3c"
                     /gene_synonym="EG622486"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtgtgttg agaggagttg gtggagttgg tggagtttgg tggagttggt ggtgcccttt
       61 gcgatttcgt tgtatctagt gagctgtgtg tggattttgt gtttgattgg tttgtgtgtg
      121 agcttgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtctaga tcagtgtgtg
      181 tttgggagga gcgttgcttg tgtttgtgag ttgagtttta aaattacttg agtgtgagtg
      241 actttgtgtt gtatgtgggt gtgtgtgtgt aggtataccc gtgggtgact ctaagtgcac
      301 ctgtgtgttt gtgaccgagt gtgtgagagt gtgtgtgtgc gagcacacaa gagtgtgtgt
      361 aggtgcacgt gtagcaggtg tgagaacatc tgttgtgttg aggccgtcag tcagcttggc
      421 cattgtttct aaggtagcat ttatattttg ttacctcaaa tgggccctgg gagtcaacag
      481 aagtcagaaa agctcagatg taagcctcct ttctctaaca tggatggttt tcatgctcaa
      541 tatgtgatgc tagagactat cggccatgga ggctgtgcca cagtgaagct ggcccagcac
      601 cgcctcacag gcactcatgt ggctgtcaaa accattcaaa agagggggta ttggtgcatc
      661 cttatcatgt ctgaggtaga cttactgatg atggccgatc atccaaatgt catctctctc
      721 cttcaagtca ttgagaccaa gaagaaagta tacctcatta tggagttgtg cgagggtaaa
      781 tcactttacc aacacatccg aaaagctggc tacctgcagg agcatgaagc acgcgcatta
      841 ttcaagcagc tcttaagtgc tatgaactac tgccacaacc agggtatagt tcacagggac
      901 ctgaaaccgg acaatatcat ggttgaaaaa gatgggaaag tgaagatcat tgattttgga
      961 ctcagcacca aagtgaagcc agggcaaaaa ctcaacttat tctgtgggac ttacccattt
     1021 agtgctcctg aggtgctcct tagcacaccc tatgatgggc ccaagatcga tgtatggact
     1081 cttggagttg tgttgtattt tatggtaact ggaaagatcc cgtttgatgc ttgcagcata
     1141 aaaaggctgg taaagcgaat tcttgcagga aagtattcta ttccctctag actgtcagca
     1201 gagctccgag acctgcttag tcttttaatg acggccaacc ccaaactcag gcccactgtt
     1261 gctgaggtta tggtgcatcc ctgggtcaca gaaggctcag gggtgttccc agatccttgt
     1321 gaagaacaga cccccctcaa gccagaccct gcgattgtaa aagcaatggg acatatcggg
     1381 ttccaagctc aagatattga agattcgtta cgtcagagaa aattcaacca aaccatggcg
     1441 tcttattgtc tactgaaaaa acagattctt aaggaatgtg acaggccaac ccgggctagg
     1501 cccgtgaacc catcggtgac cccattccct tcccttgttg atactgctac tacctgtctc
     1561 ggacttcgca ggagagagaa tgaacccaca tgtccctggt catccgccaa taggcaagtg
     1621 tctgtctgtg gcaagagtac tagtaagaaa agagacagaa gagtcagttg gcccagtgtt
     1681 ctcggcaggc cacgccacac ggcacccaca atggaccaca cacgcacccg tactaggagt
     1741 gtaccctgca tttgctcaat gttttgcaca gtccagccaa acagcagcga agagagcaca
     1801 caaggccaca ccagagcctc agcagcagat aagcctgtcc gcagcagggg ctggcccaga
     1861 ggcatcaagg gctggacgag gatgatagga aatgcgatga ggaagctctg ttgctgtatc
     1921 ccatccaaag agacatctca cctggggcag aacagagtct cccccaaaaa ataagacaca
     1981 ggaagggtgt caggagaaca agcatccggc aaggcccaga agatcaccag aggatgccgg
     2041 atgctacgat tctacagtta tagtattgga aaggacccgt gtatagacac ggacctgaaa
     2101 aagggaacct tgtggaaagg catcatgttc tgggttcagc gtgcttcact cagagccccc
     2161 agtccagcca gggggcaaga aagcaaatga tgaaatccca gatgggctct gggaacacca
     2221 ttcagagtag tggcttaaag catgtccaaa gctggtagag acagcccctc tgcctgccca
     2281 ggctcataat cagactcctc ctctgagaat aaaatagatg tttgtgaaag a
//
