LOCUS       NM_013741               2059 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus sperm motility kinase 2A (Smok2a), mRNA.
ACCESSION   NM_013741 XM_907097 XM_990030
VERSION     NM_013741.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Zavzavadjian,J.R., Couture,S., Park,W.S., Whalen,J., Lyon,S.,
            Lee,G., Fung,E., Mi,Q., Liu,J., Wall,E., Santat,L., Dhandapani,K.,
            Kivork,C., Driver,A., Zhu,X., Chang,M.S., Randhawa,B., Gehrig,E.,
            Bryan,H., Verghese,M., Maer,A., Saunders,B., Ning,Y.,
            Subramaniam,S., Meyer,T., Simon,M.I., O'Rourke,N., Chandy,G. and
            Fraser,I.D.
  TITLE     The alliance for cellular signaling plasmid collection: a flexible
            resource for protein localization studies and signaling pathway
            analysis
  JOURNAL   Mol Cell Proteomics 6 (3), 413-424 (2007)
   PUBMED   17192258
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Herrmann,B.G., Koschorz,B., Wertz,K., McLaughlin,K.J. and
            Kispert,A.
  TITLE     A protein kinase encoded by the t complex responder gene causes
            non-mendelian inheritance
  JOURNAL   Nature 402 (6758), 141-146 (1999)
   PUBMED   10647005
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC166360.4.
            
            On Feb 28, 2022 this sequence version replaced NM_013741.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ245453.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-184               AC166360.4         11486-11669         c
            185-1770            AC166360.4         5644-7229           c
            1771-2059           AC166360.4         4927-5215           c
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 8.82 cM"
     gene            1..2059
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /note="sperm motility kinase 2A"
                     /db_xref="GeneID:27263"
                     /db_xref="MGI:MGI:1351487"
     exon            1..184
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /inference="alignment:Splign:2.1.0"
     exon            185..1770
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /inference="alignment:Splign:2.1.0"
     CDS             211..1725
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /EC_number="2.7.11.1"
                     /note="sperm motility kinase 2; putative protein kinase"
                     /codon_start=1
                     /product="sperm motility kinase 2A"
                     /protein_id="NP_038769.1"
                     /db_xref="CCDS:CCDS49951.1"
                     /db_xref="GeneID:27263"
                     /db_xref="MGI:MGI:1351487"
                     /translation="MGSGSQQKSEKLRSKPPFSEMENFHAQYEMLGTIGHGGSTKVKL
                     ARHRLTGTHVAVKMIPKREYWCKPLMSEAELLMMADHPNIISLLQVIETKKKVYLIME
                     LCEGKSLYQHIRNAGYLQEDEARALFKQLLSAINYCHNQGIVHRDLKPDNIMVEKDGR
                     VKIIDFGLGIQVKPGQKLNLFCGTYPFSAPEVLLSRPYDGPKIDVWTLGVVLYFMVTG
                     KIPFDAASIEKLRKQIVAGKYSVPCRLSVKLHHLITLLMTDNPELRPTVAEVMMHPWV
                     TKGSGVFPDPCEEQIPLKPDPAIVKAMGHIGFQAQDIEDSLRQRKFNETMASYCLLKK
                     QILKECDRPIRAQPMNPSVTPFPSLVDTPTFHLGLRRRETEPTSLRLSANRQMSVCGR
                     STSKKRDRSFSWPGVLSRPINITPTMDQTHTCTRSVPCINSNFCIIHPNSSDESTEGH
                     TSASAEDKPVRSRGWPRGIKGWTSKIGNAMRKLCCCIPSNETSHLGQRRVSPKK"
     exon            1771..2059
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2038..2043
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /note="hexamer: AATAGA"
     polyA_site      2059
                     /gene="Smok2a"
                     /gene_synonym="Smok2"
                     /note="major polyA site"
ORIGIN      
        1 cctttgtgtt tgtgtgtgtg tctgtgtgta tacttgtggg tgactgtaag tgcacctgtg
       61 tgatagttca aaagtgtatg agagtgtgtg tgtgtgcaca agagtgtgtg taggtgcacg
      121 tgtggtaggt gtgagaacac ctcttgtgtt gaggccgtca gtcagcttgg ccattgtttc
      181 taaggtagca tttatacttt gttacctcaa atggggtctg ggagtcaaca gaagtcagaa
      241 aagctcagat ccaagccccc tttctctgaa atggagaact ttcatgctca atatgagatg
      301 ctagggacta ttggccatgg aggcagcaca aaggtgaagc tggcccgaca ccgcctcaca
      361 ggcacccacg tggctgtcaa aatgattcca aagagggagt attggtgcaa acctctcatg
      421 tctgaggcag agttactgat gatggccgat catccgaata tcatctctct ccttcaagtc
      481 attgagacca agaagaaagt atacctcatt atggagttgt gtgagggtaa atcactttac
      541 caacacatca gaaacgctgg ctacctgcag gaggatgaag cacgagcatt attcaagcag
      601 ctcttaagtg ctataaacta ctgccacaac cagggtatag ttcacaggga cctgaaacct
      661 gacaatatta tggtagaaaa agatgggaga gtaaagatca ttgattttgg acttggcatc
      721 caagtgaagc cagggcaaaa actaaactta ttctgtggga cttacccatt tagtgctcct
      781 gaggtgctcc ttagcagacc ctatgatggg cccaagatcg atgtatggac tcttggagtt
      841 gtgctatact ttatggtaac tggaaagatc ccatttgatg ctgccagcat agaaaagctg
      901 cggaagcaaa ttgttgcagg aaagtattct gttccctgta gactgtcagt aaagcttcat
      961 cacctgatta ctcttttaat gacagacaac cctgaactta ggcccactgt tgctgaagtt
     1021 atgatgcatc cctgggtcac aaaaggctca ggggtgttcc cagatccttg tgaagaacag
     1081 atacccctca agccagaccc tgcgattgta aaagcaatgg gacatattgg gttccaagct
     1141 caagacattg aagattcttt acgtcagaga aaattcaacg aaaccatggc atcttattgt
     1201 ctactgaaaa aacagattct taaggaatgt gacaggccaa tccgggctca gcccatgaat
     1261 ccatcggtga ccccattccc ctcccttgtt gatactccta ctttccatct cggacttcgg
     1321 aggagagaga ctgaacccac gagtctcaga ttatctgcta ataggcaaat gtctgtctgt
     1381 ggaaggagta ctagtaagaa aagagacaga agtttcagtt ggcccggtgt tctcagcagg
     1441 ccgattaaca taacacccac aatggaccaa acacacacct gtactaggag tgttccctgc
     1501 attaactcaa atttttgcat aatccatcca aacagcagcg acgagagtac agaaggccac
     1561 accagtgcct cagcagagga taagcctgtc cgcagcagag gctggcccag aggcatcaag
     1621 ggctggacta gcaagatagg aaatgcgatg aggaagctct gttgctgtat cccatcaaat
     1681 gagacatctc acctggggca gaggagagtc tcccccaaaa aataagacac aggaagggtg
     1741 tcaggagaac gagcattcgg ctcggcacag aagatcacta gaggatgccg gatgctatga
     1801 ttcaacagtt atagtattgg aaaggaccca tgtatagaca tggacctgca aaagggaacc
     1861 ttgtggaaag gcatcatgtt ctgggtccag ccagagggaa gaaagcaaat gatgaaatcc
     1921 cagatggtct ccgggatcac cattccgagc aggggctgaa agcctgtcca aagctggtag
     1981 agacaaaagc ccctctgcct acccagggtc ataatcagac tcctgctctg agaataaaat
     2041 agatgtttgt gaaagatga
//
