LOCUS       NM_001369218            1954 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus small integral membrane protein 41 (Smim41), mRNA.
ACCESSION   NM_001369218 NM_001033182 NR_033803 XM_358478
VERSION     NM_001369218.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC163018.3.
            
            On Mar 26, 2019 this sequence version replaced NR_033803.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134453.1, AK144445.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: translation inferred from conservation
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-408               AC163018.3         90668-91075
            409-1954            AC163018.3         93324-94869
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 56.68 cM"
     gene            1..1954
                     /gene="Smim41"
                     /gene_synonym="6030408B16Rik"
                     /note="small integral membrane protein 41"
                     /db_xref="GeneID:77717"
                     /db_xref="MGI:MGI:1924967"
     exon            1..408
                     /gene="Smim41"
                     /gene_synonym="6030408B16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..300
                     /gene="Smim41"
                     /gene_synonym="6030408B16Rik"
                     /codon_start=1
                     /product="small integral membrane protein 41"
                     /protein_id="NP_001356147.1"
                     /db_xref="CCDS:CCDS88850.1"
                     /db_xref="GeneID:77717"
                     /db_xref="MGI:MGI:1924967"
                     /translation="MNGSQVGAAAKAAWLSCCNQSGLPLGPPEGPRMVQAVVLGVLSL
                     LVLCGILFLGGGLLLRAQGLIALLARERHSTPEAEPGACGGDDDS"
     exon            409..1954
                     /gene="Smim41"
                     /gene_synonym="6030408B16Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtgtgcaca tctgggcagc tggtgggagc atgaacggct cacaggtggg agctgcagcc
       61 aaggctgcct ggctgagctg ctgcaaccag tccgggctgc cactcggacc cccagagggg
      121 ccacgcatgg tgcaggcagt cgtgctgggc gtcctgtcac ttttggtgct ctgtgggatc
      181 ctgttcctgg gtggtggact cctcctccgc gctcagggcc tgatagccct gctggcccga
      241 gaaaggcatt caacccccga ggctgagcct ggtgcctgtg gaggggatga cgactcctag
      301 gtgtcagctg ctcttgagat tcagcctgtt ctgtgccacg ccatccagag ttcatttctg
      361 tgaggcacag cggaaggtcc aacccacaag ctcttatttc ccgcacaggt gctggacatc
      421 tcccctcgcc tgccgcccac ccgcacccta tttgtgcttg tggtgatgga ctgaagacac
      481 cggaccggtg actcctcatc ctgggactct gttattcggc tgtctccgag ctgctcccga
      541 cactcctggg gtgggcgcag gagactcccg ctcagaacaa gaacaagtga gtctgcttgg
      601 tgactgccct gtgccatggg cactggcttt acaccccaac ggcgtgcaca cgagtgtgcc
      661 ctctgcacac caagctctgt ggacacgagt gcagctcctg tcttgcctga tgcggtatct
      721 gacaacccag tgccctatcg ctgtcgagaa cctggaactg tttcccatct ggagagtgtg
      781 tcagccatcc agcaacagtt ccagcatcgc ttcccacggc tttgccatta aataggccag
      841 gaacgcagtt ctgagtgtgt ggtctgtttc cagcccttga cccttgggat tcttggtttc
      901 cttcctcatc tcccctcaat ttggcctgct tctagtagat tttttttttt taagaaaggg
      961 tttacaagga gctggagagg tggctgggta gttacgaaca ctgactgttc ttccagaggt
     1021 tctgagtttg attcctagta gccacatggt ggctcacaac catctgtaat gggagccaat
     1081 gccctcttct ggtgcgtctg aagacagcta tggtatactc atatacatta aataaataat
     1141 attaaaaaaa aagaaagggt ttacaatagc ccaagctgac ctgaaactag ttgtgttctc
     1201 taagatggac ctgagatcac ggcaatcctc ctgcttcagc ctctcaggga ttatagtcag
     1261 gcccgccaaa gctagtttag aatggagggt agatgtgatg cccactggga gtgattccca
     1321 ctggtcaatg tgaccaagag cttggcttta ttcaaccaca gctttgtatg tgtatgtgta
     1381 tgtgtatgtg tatgtgtatg tgtatgtgta tgtgtatgtg tatgtgtatg cgtgtgtgca
     1441 catgtgtgtg agtctgtgtg gtgtgcacac atgtgtgtga atgtgtgtgt gtatatgtgt
     1501 gtgcatgtgt gtgaatgtgt gagtgtgtgt atgtgtgtgc gtgtgcacac gcatgcacgt
     1561 gtgtgtgcat gtgtgtgtga gtgtgtatgt gtgagtgagt gtgtgtatat gtatgcgtgt
     1621 gtgtgaatgt atgtgtgtat gtgtgagtga gtgtgtgtat atgtatgcgt gtgtgtgaat
     1681 gtatgtatgt gtgtatgtat gtgtgtgcat gtgtatgcat gtgtatgtgt gtgtgtgtgt
     1741 agttacttct ctgagagtgg gttttgtaaa ccttgccctc atctttgaaa tagaagtgac
     1801 accatcagtg tgagtgtgga cccagtgggt aatgtgtttg cccatcacta tataaggttt
     1861 tgtatactat aattactaag ggacactgtt tccccaagcc tggctctgtt aattattgtt
     1921 ctattgcgat aaagcatcat gaccaaggca actt
//
