LOCUS       NM_001033168            2504 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus small integral membrane protein 33 (Smim33), mRNA.
ACCESSION   NM_001033168 XM_622241 XM_908274
VERSION     NM_001033168.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK162297.1.
            
            On Apr 6, 2007 this sequence version replaced NM_001033168.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK162297.1, BQ926554.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2504              AK162297.1         2-2505
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 19.22 cM"
     gene            1..2504
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /note="small integral membrane protein 33"
                     /db_xref="GeneID:73449"
                     /db_xref="MGI:MGI:1920699"
     exon            1..108
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..483
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /codon_start=1
                     /product="small integral membrane protein 33"
                     /protein_id="NP_001028340.1"
                     /db_xref="CCDS:CCDS50252.1"
                     /db_xref="GeneID:73449"
                     /db_xref="MGI:MGI:1920699"
                     /translation="MHQDDYYPQPSLLVNGSLDQEPQRQLPDMPPRGGDGLPLLAAII
                     AAFVLLAICIVLAVHFGPALHQGQATLLTEPPALKPENGVYLIHWRLLSLQDSHRESQ
                     QGLFIPHSGPALDGHRPSIDEVTYL"
     exon            109..2504
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1392..1397
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /note="hexamer: CATAAA"
     polyA_site      1413
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /note="major polyA site"
     polyA_site      2495
                     /gene="Smim33"
                     /gene_synonym="1700066B19Rik"
                     /note="major polyA site"
ORIGIN      
        1 agacgtggca gctccaggta gggactgagc tagggcagtg agctctctct tcctttgctg
       61 gtatccagtc ccaagagaac tctgcgccag ccctggacaa tgcaccagga tgactactac
      121 cctcagcctt ctctacttgt gaatggttcg ttggatcagg agcctcaaag gcagctccca
      181 gatatgcccc ctcgaggtgg cgacgggctg ccgctgcttg ctgccatcat cgcggccttt
      241 gtcctgctgg cgatctgcat tgtgctggcg gttcactttg ggcctgcact gcatcagggt
      301 caggctactc tcctcacaga gccaccggcc ctaaagccag agaacggcgt ttacctcatc
      361 cactggcggc tactgagtct acaggacagt cacagagaaa gccagcaggg actttttatt
      421 cctcactctg gccctgccct agacgggcac aggcccagca tcgatgaagt cacgtatctg
      481 taagagtgtg atttggaagt tagcctggct ggtctcagaa caagacactg gactagagag
      541 tgaatggaag ccagggtgtc agagctatgg actgcctccg gactcatctg gagctgtcct
      601 cggacttaac acgaaagctt catgatgaca agaaaagccc cttgaggatc ttgccttgtg
      661 acatggcgcc aaggccaccc ttacaaggct tcccctcaga gacctcctga accttctcag
      721 agtgcctttg tcttcttgca cctctgatct ccatctccct tgaagtaaag tgaagattcc
      781 atccctgagc gagaggagag tcagaggccc tgtgttcgca cactgctgat ccagggagaa
      841 ctaaggcaag gggcctgggg tatcttctct gagacacagt gtgcctggga aaggagacaa
      901 ctctattatt gcctttctgc ccttggaggg cacctttgcc tgctaggccc tgttgataac
      961 ctccagagcc cttggggtcc ctaatctcta tccagagttc caagatgggt ttgaatgtcc
     1021 ccgaactctg tcttgccatc ctaggatata atggggggaa tttggagact ctaattacct
     1081 cttattttca gtgtgagggt gggcccgctt ggaagaagcc taaaactcag ttcaaacaac
     1141 ttccagatcc aggactttcc agctactggg aaaacaggaa atgaaaggga atgttatgga
     1201 acgcgttcgg ggaaggaggg agcatgaaag ggtccatccc catagggaag tagcattgct
     1261 cagcctgtgg tcaggaaaaa gcaggcagac caggagaaca aagctgggcc tcctggaggc
     1321 tctctgggaa aggcaccccc tttctctggt acctcagatg cttattcata tgcagtcaag
     1381 aaacctacag acataaacta tatataaaca gcacagtggt actgtctttt aatcttagca
     1441 cttgagagat agaggcagga aaatcacaag ttcagggtta tccttgatga cactgcaagt
     1501 ttgagggcca gcctagacta catggcacct gtttattaag agaaaggaga ggcctgcctt
     1561 gccactagcc acctgtggct ggctagaggt tgtgaaataa aagcaagccc tgaacctcac
     1621 agtagagttg gccctgatag agcatgggca gcttagccag tccttaggag aactggcccc
     1681 accactcatc tgctgtgaaa tgaggtggag tgggcgactg gtgaagccct ttcccctccc
     1741 ccaccccact ccccttgcag tagtcgggac agctgctccc cacccccacc tgtcaccggt
     1801 caaccccccc acctgtcatg aaagggaaag agctatccct gtccctcact ggctgaaggc
     1861 aggctctgca cctcgcttgg gcaacacagt ggagctggcc ctgaggatga tggctcaggt
     1921 gaggcagccc cgaaggtgtg acatggccag agcagtccca gccccttgcc gggtgcagca
     1981 cttgagagag caggctgcct tgattgggca gtacagccga gggctctggc agcgtgggtg
     2041 cgggtgagcc tgcgcgaggg agggcataag agcggaagag ctgaccctgc ttcctgccga
     2101 ggtcagcatt gggtgaccta gtcagagcag tgctggagag ctcgccctgg cggtttgaat
     2161 aaggaagagc tggcaggctg acgctcagct tccatccacg cccagatcca gatccaccac
     2221 cacaacctct acagcatctg tgaactgttg ggacacatga aagcagtcct gctgttccta
     2281 agctgtagga tctctgtgac acagggcaac agcaggaaac caggaggggt cctggtgagg
     2341 atccaatatt gacggcgtca cggaagccag agatctcaga acagaccaat gactcagtgc
     2401 aatgaacatt cccaagtgaa ggtgtgtgga cagaggggtt tattgtggga cacactgtga
     2461 cacactacag cttccacaac gagatgttca ccatgctttg tttt
//
