LOCUS       NM_134133               2008 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus small integral membrane protein 3 (Smim3), mRNA.
ACCESSION   NM_134133
VERSION     NM_134133.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Barlow,J.L., Drynan,L.F., Hewett,D.R., Holmes,L.R.,
            Lorenzo-Abalde,S., Lane,A.L., Jolin,H.E., Pannell,R.,
            Middleton,A.J., Wong,S.H., Warren,A.J., Wainscoat,J.S.,
            Boultwood,J. and McKenzie,A.N.
  TITLE     A p53-dependent mechanism underlies macrocytic anemia in a mouse
            model of human 5q- syndrome
  JOURNAL   Nat Med 16 (1), 59-66 (2010)
   PUBMED   19966810
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Vician,L., Silver,A.L., Farias-Eisner,R. and Herschman,H.R.
  TITLE     NID67, a small putative membrane protein, is preferentially induced
            by NGF in PC12 pheochromocytoma cells
  JOURNAL   J Neurosci Res 64 (2), 108-120 (2001)
   PUBMED   11288140
REFERENCE   3  (bases 1 to 2008)
  AUTHORS   Takahashi,Y., Miyata,M., Zheng,P., Imazato,T., Horwitz,A. and
            Smith,J.D.
  TITLE     Identification of cAMP analogue inducible genes in RAW264
            macrophages
  JOURNAL   Biochim Biophys Acta 1492 (2-3), 385-394 (2000)
   PUBMED   11004510
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK143383.1, AK155873.1 and AF313412.1.
            
            On Feb 17, 2007 this sequence version replaced NM_134133.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF313412.1, AK143383.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-354               AK143383.1         5-358
            355-1984            AK155873.1         1-1630
            1985-2008           AF313412.1         1527-1550
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 34.36 cM"
     gene            1..2008
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /note="small integral membrane protein 3"
                     /db_xref="GeneID:106878"
                     /db_xref="MGI:MGI:1917088"
     exon            1..591
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /inference="alignment:Splign:2.1.0"
     exon            592..1986
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /inference="alignment:Splign:2.1.0"
     CDS             599..781
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /note="putative small membrane protein NID67; NGF-induced
                     differentiation clone 67 protein"
                     /codon_start=1
                     /product="small integral membrane protein 3"
                     /protein_id="NP_598894.1"
                     /db_xref="CCDS:CCDS37831.1"
                     /db_xref="GeneID:106878"
                     /db_xref="MGI:MGI:1917088"
                     /translation="MDAITQSPVDAVLPKHILDIWAIVLIILATIVIMTSLFLCPATA
                     VIIYRMRTHPVLNGAA"
     regulatory      1901..1906
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /note="hexamer: AATAAA"
     polyA_site      1922
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /note="major polyA site"
     regulatory      1967..1972
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /note="hexamer: GATAAA"
     polyA_site      1986
                     /gene="Smim3"
                     /gene_synonym="2010002N04Rik; cI-41; Nid67"
                     /note="major polyA site"
ORIGIN      
        1 aggcttttta cttcgacttc acaagagggt tagtgcaact atcccagctt aacagaacgg
       61 agaggcaaac aaagggtctt actaaatatc ttacactcag aactctgtac cgcccgcatc
      121 caaactactg ttggaaaaga ttttgggacc tactgtaggc tagcccctct gtttaccaca
      181 cagagagcgg aagtcccctc gagaaacgaa gtgactaagg ttacaggctg agtgtaatgc
      241 aaggtgaccg cacagttctg agtctctcca agttcctttc tttacagcag ccctggggag
      301 gctgggagga gcagagcagg tttcgcgctg aggctggggg ctcagtcttt ccggggcggt
      361 ccccagcggc ggtgcattcc agagtcgtcc gtgcgtggcg cgcggggtgc tgagctcgca
      421 tcccagccgc tcctgcgcgc tcccgggctt ggagtccgag cacgttctcg gcgctagcgg
      481 ggctgaggtt ccagagctgg ggttgcttga ggatcccttt cgatcctagg ggcccagaaa
      541 agcaccggtt actgcttgta atcctgactg aagatcggga tcggatctag gggccaacat
      601 ggacgctatc acccaatccc ctgtggatgc cgtgcttccc aagcacatcc tggatatctg
      661 ggccatagtc ctcatcatcc tggctaccat tgtcatcatg acctccttgt ttctgtgccc
      721 ggccactgcg gtcatcatct atcgaatgcg gactcaccca gttctcaacg gggctgcctg
      781 agagagaccc ttgaaggcgg gatggcgtgt gataagggca gaggtcttgc ccctatcctg
      841 atttcagaaa gacagcgggg agactcagga cctggatttg tgctttaatt ttgattctgc
      901 tgttgggcta cagtgtagat gtcatcaagg gacctaactc tgagtcccag gctctcctta
      961 gctttcagcc gtgggtcacg acccctgcct tcctacctca cagggttgtg ggaaccacgt
     1021 gacagcggag gtaaaagctg tttgagagca gtgaagccac acagaccttg tgcagtgaga
     1081 agctttgaag aatcaaagac ccctgaagct gctgccggta caggaggcga gggcggctgg
     1141 gaaagaggaa ctttggccag tgcccctcat gccgagccaa gcaaaatggt gcaccccagc
     1201 cccagcaaat cagagttttg tttttgtttt tgttttcaag tgacactctt tccatttttc
     1261 ttagtttggg agaaagagcg agtatggcag gcgagagaga tgagtaaaag tttcagaagc
     1321 gtctcagcca atccctgctc ctgaaggaga gctttgccct tatgcaccag gcaagatggc
     1381 ctgctttcag cactgggccg cacatctctg ttagcgctga ctctcagccg ggttagaaat
     1441 gcaggacggc tgagttttct gccccgcatt tcagctcctt tatgtgccct acagtagagg
     1501 atttcccctg tctgagcttt gtggcattta gcttcaagct tttgttatta ctcttttgcg
     1561 gcaccagaga tggaactttg gcctccttta cgctgggaaa ggatcccacc actgagctac
     1621 aacccagccc ttctagcccc cacagctgtc tgaagtactt attattttaa gagatttccc
     1681 aggacttttg aacccgactt aagacaacga cggttatttt agatgctatg atttatattt
     1741 atatagagat atttctagac tattaaagct cgccctttga tactggaatc aggggcatct
     1801 tgggatttat tgttatgtaa gaagatagca tagattttgg gatagtatta tgtcagacgt
     1861 tgcttactct gatcttcatt gatgtatgca tcccgtttcc aataaatgcc acactgagag
     1921 tgtctgaagc ttttctttga agaacaccta ctgaactttg aacttagata aaaagattca
     1981 actcaaaaaa aaaaaaaaaa aaaaaaaa
//
