LOCUS       NM_027050                606 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus small integral membrane protein 23 (Smim23), mRNA.
ACCESSION   NM_027050 XM_126070 XM_906095
VERSION     NM_027050.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 606)
  AUTHORS   Miyata,H., Castaneda,J.M., Fujihara,Y., Yu,Z., Archambeault,D.R.,
            Isotani,A., Kiyozumi,D., Kriseman,M.L., Mashiko,D., Matsumura,T.,
            Matzuk,R.M., Mori,M., Noda,T., Oji,A., Okabe,M.,
            Prunskaite-Hyyrylainen,R., Ramirez-Solis,R., Satouh,Y., Zhang,Q.,
            Ikawa,M. and Matzuk,M.M.
  TITLE     Genome engineering uncovers 54 evolutionarily conserved and
            testis-enriched genes that are not required for male fertility in
            mice
  JOURNAL   Proc Natl Acad Sci U S A 113 (28), 7704-7710 (2016)
   PUBMED   27357688
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL669951.18 and AK005748.1.
            
            On or before Nov 18, 2009 this sequence version replaced
            XM_906095.2, XM_126070.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK005748.1, BU938038.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                AL669951.18        145291-145311       c
            22-606              AK005748.1         2-586
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 19.11 cM"
     gene            1..606
                     /gene="Smim23"
                     /gene_synonym="1700008A04Rik"
                     /note="small integral membrane protein 23"
                     /db_xref="GeneID:69351"
                     /db_xref="MGI:MGI:1916601"
     exon            1..170
                     /gene="Smim23"
                     /gene_synonym="1700008A04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             78..488
                     /gene="Smim23"
                     /gene_synonym="1700008A04Rik"
                     /note="testis specific expressed protein 4"
                     /codon_start=1
                     /product="small integral membrane protein 23"
                     /protein_id="NP_081326.1"
                     /db_xref="CCDS:CCDS48767.1"
                     /db_xref="GeneID:69351"
                     /db_xref="MGI:MGI:1916601"
                     /translation="MTIQKTGCRGREAAEVVEQRRRSHHCDDRKQTLLALLILVLYLG
                     MGISGSSWEVSGQTKDCNHFQNPVTPQGFEYQTKEPAEEPLRTLRKWLKINLHGFLEK
                     LEKEVRELEQLVRDLEFWLDALLGDLRPEDPCFT"
     exon            171..222
                     /gene="Smim23"
                     /gene_synonym="1700008A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            223..290
                     /gene="Smim23"
                     /gene_synonym="1700008A04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            291..606
                     /gene="Smim23"
                     /gene_synonym="1700008A04Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggagggga gtcatctaca tgcctgtcca ctgaaagtac ttccatctac cccaagactt
       61 tgaccctgag cagagacatg acaatccaga agacgggttg cagaggccgg gaagcagctg
      121 aggtagttga acagagaagg agaagtcacc actgtgatga caggaaacag acgctgttgg
      181 cactgctcat cttggtgctc tacctgggta tggggatatc aggaagcagc tgggaagtgt
      241 caggacagac caaggactgc aaccactttc agaatcctgt gacaccccag ggctttgaat
      301 atcaaaccaa ggaacctgct gaagagccat taaggaccct caggaagtgg ctgaagataa
      361 acttgcatgg ctttttggag aagttagaga aggaggtcag agagctggag cagctggtgc
      421 gggacctgga attctggctc gatgcccttc tgggagatct gcgcccagag gatccctgct
      481 tcacctaaaa ggtcatttgt gaagggcagg tgcctggacc tggggagcag aagaggaggt
      541 gatgatgtca ggctctgaca cttgctgctc caggcaggct ggagaaaata aagtgactga
      601 gaggtg
//
