LOCUS       NM_030252               1037 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus small integral membrane protein 12 (Smim12), mRNA.
ACCESSION   NM_030252
VERSION     NM_030252.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY237825.1, AK141221.1 and BQ173894.1.
            
            On Sep 7, 2006 this sequence version replaced NM_030252.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK131915.1, AK141221.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-67                BY237825.1         2-68
            68-1021             AK141221.1         2-955
            1022-1037           BQ173894.1         1-16                c
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 61.41 cM"
     gene            1..1037
                     /gene="Smim12"
                     /note="small integral membrane protein 12"
                     /db_xref="GeneID:80284"
                     /db_xref="MGI:MGI:1933141"
     exon            1..115
                     /gene="Smim12"
                     /inference="alignment:Splign:2.1.0"
     exon            116..1022
                     /gene="Smim12"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..399
                     /gene="Smim12"
                     /note="UPF0767 protein C1orf212 homolog"
                     /codon_start=1
                     /product="small integral membrane protein 12"
                     /protein_id="NP_084528.1"
                     /db_xref="CCDS:CCDS38883.1"
                     /db_xref="GeneID:80284"
                     /db_xref="MGI:MGI:1933141"
                     /translation="MWPVLWTVVRTYAPYVTFPVAFVVGAVGYHLEWFIRGKTPQPVE
                     EEKSILERREDRKLDEMLGKDHTQVVSLKDKLEFAPKAVLNRNRPEKN"
     regulatory      1000..1005
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Smim12"
                     /note="hexamer: ATTAAA"
     polyA_site      1022
                     /gene="Smim12"
                     /note="major polyA site"
ORIGIN      
        1 agtgggcggg gcctcgggcg cgccccgcgg gccactggga acctcggcgt ccctgttgct
       61 cccggctagc gggcgcagcg cgggacctgt ccggggtgtg cgggctggac cgcagatgtc
      121 atgtggcctg tgctttggac cgtggtgcga acctatgccc cctatgtcac cttccctgtg
      181 gcctttgtgg tcggggctgt gggctaccac ctggaatggt tcatcagggg aaagactcct
      241 cagcctgtgg aggaggagaa gagcatcctg gagcgccgag aggaccgaaa gctggatgag
      301 atgctaggca aggaccacac tcaggtggtg agccttaagg acaagctaga atttgcccct
      361 aaagcagtcc tgaacagaaa ccgtccagag aagaactaat ggagggccca ggtccctgtg
      421 gtgcacaggg atatgccatg tcctgccgcc atgtcgaccc agcttcagaa cacacatctg
      481 atttgctttg ctgctcactc cggccccctg agcacccaca gccactcgtg tactggctgg
      541 tcctgtatgg ctgcagagcg gcagcagtag gggccagcaa tgaggaagac tgcgtctgct
      601 cagtgggctc tctccgtgcc tggacaggct tctgatctta cctgggagcc ctgcagggag
      661 gagccctggg gaatgaacct tggtctcagg ctcccgggga ggggcttggc ctcaactggg
      721 aatggttggg gtttatcgtt gccattagga ggggcacctc catgtctagt tctcgttttt
      781 gcactgaaaa gaattcagga atgtccctgg ctcccttgat gaggctttct tattttcctg
      841 tgtgcattct tccctttact ggctcaggcg tgggattctc aggggaagga aagcatgctt
      901 ctcttgtggg gagctcaggc tgtttacctc ggggccagcg gggcataagc ctggaaataa
      961 tcactgtctt ccacccttcc tcactggagt ggggactcaa ttaaagtggc acctggcaca
     1021 taaaaaaaaa aaaaaaa
//
