LOCUS       NP_080167                483 aa            linear   ROD 19-NOV-2024
DEFINITION  SWI/SNF-related matrix-associated actin-dependent regulator of
            chromatin subfamily D member 3 [Mus musculus].
ACCESSION   NP_080167 XP_489079
VERSION     NP_080167.3
DBSOURCE    REFSEQ: accession NM_025891.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (residues 1 to 483)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (residues 1 to 483)
  AUTHORS   Xu,J., Li,X., Chen,W., Zhang,Z., Zhou,Y., Gou,Y., Lv,C.A., Jin,L.,
            Qiu,X., Ma,S., Wu,Q.Q., Liu,T., Mi,L., Yang,Z., Yu,T., Pan,X.,
            Feng,Y., Shan,P. and Meng,Z.X.
  TITLE     Myofiber Baf60c controls muscle regeneration by modulating
            Dkk3-mediated paracrine signaling
  JOURNAL   J Exp Med 220 (9) (2023)
   PUBMED   37284884
  REMARK    GeneRIF: Myofiber Baf60c controls muscle regeneration by modulating
            Dkk3-mediated paracrine signaling.
REFERENCE   3  (residues 1 to 483)
  AUTHORS   Boogerd,C.J., Perini,I., Kyriakopoulou,E., Han,S.J., La,P., van der
            Swaan,B., Berkhout,J.B., Versteeg,D., Monshouwer-Kloots,J. and van
            Rooij,E.
  TITLE     Cardiomyocyte proliferation is suppressed by ARID1A-mediated YAP
            inhibition during cardiac maturation
  JOURNAL   Nat Commun 14 (1), 4716 (2023)
   PUBMED   37543677
  REMARK    Publication Status: Online-Only
REFERENCE   4  (residues 1 to 483)
  AUTHORS   Ferguson,L.P., Gatchalian,J., McDermott,M.L., Nakamura,M.,
            Chambers,K., Rajbhandari,N., Lytle,N.K., Rosenthal,S.B.,
            Hamilton,M., Albini,S., Wartenberg,M., Zlobec,I., Galvan,J.A.,
            Karamitopoulou,E., Vavinskaya,V., Wascher,A., Lowy,A.M.,
            Schurch,C.M., Puri,P.L., Bruneau,B.G., Hargreaves,D.C. and Reya,T.
  TITLE     Smarcd3 is an epigenetic modulator of the metabolic landscape in
            pancreatic ductal adenocarcinoma
  JOURNAL   Nat Commun 14 (1), 292 (2023)
   PUBMED   36653361
  REMARK    GeneRIF: Smarcd3 is an epigenetic modulator of the metabolic
            landscape in pancreatic ductal adenocarcinoma.
            Publication Status: Online-Only
REFERENCE   5  (residues 1 to 483)
  AUTHORS   Wang,Y., Elsherbiny,A., Kessler,L., Cordero,J., Shi,H., Serke,H.,
            Lityagina,O., Trogisch,F.A., Mohammadi,M.M., El-Battrawy,I.,
            Backs,J., Wieland,T., Heineke,J. and Dobreva,G.
  TITLE     Lamin A/C-dependent chromatin architecture safeguards naive
            pluripotency to prevent aberrant cardiovascular cell fate and
            function
  JOURNAL   Nat Commun 13 (1), 6663 (2022)
   PUBMED   36333314
  REMARK    Publication Status: Online-Only
REFERENCE   6  (residues 1 to 483)
  AUTHORS   de la Serna,I.L., Carlson,K.A. and Imbalzano,A.N.
  TITLE     Mammalian SWI/SNF complexes promote MyoD-mediated muscle
            differentiation
  JOURNAL   Nat Genet 27 (2), 187-190 (2001)
   PUBMED   11175787
REFERENCE   7  (residues 1 to 483)
  AUTHORS   Zhang,H.S., Gavin,M., Dahiya,A., Postigo,A.A., Ma,D., Luo,R.X.,
            Harbour,J.W. and Dean,D.C.
  TITLE     Exit from G1 and S phase of the cell cycle is regulated by
            repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF
  JOURNAL   Cell 101 (1), 79-89 (2000)
   PUBMED   10778858
REFERENCE   8  (residues 1 to 483)
  AUTHORS   Kim,J., Sif,S., Jones,B., Jackson,A., Koipally,J., Heller,E.,
            Winandy,S., Viel,A., Sawyer,A., Ikeda,T., Kingston,R. and
            Georgopoulos,K.
  TITLE     Ikaros DNA-binding proteins direct formation of chromatin
            remodeling complexes in lymphocytes
  JOURNAL   Immunity 10 (3), 345-355 (1999)
   PUBMED   10204490
REFERENCE   9  (residues 1 to 483)
  AUTHORS   Phelan,M.L., Sif,S., Narlikar,G.J. and Kingston,R.E.
  TITLE     Reconstitution of a core chromatin remodeling complex from SWI/SNF
            subunits
  JOURNAL   Mol Cell 3 (2), 247-253 (1999)
   PUBMED   10078207
REFERENCE   10 (residues 1 to 483)
  AUTHORS   Wang,W., Xue,Y., Zhou,S., Kuo,A., Cairns,B.R. and Crabtree,G.R.
  TITLE     Diversity and specialization of mammalian SWI/SNF complexes
  JOURNAL   Genes Dev 10 (17), 2117-2130 (1996)
   PUBMED   8804307
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK019064.1, AK005094.1 and BC060525.1.
            
            On or before Oct 12, 2005 this sequence version replaced
            XP_489079.2, NP_080167.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC013122.1, AK005094.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Mus musculus"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 11.93 cM"
     Protein         1..483
                     /product="SWI/SNF-related matrix-associated
                     actin-dependent regulator of chromatin subfamily D member
                     3"
                     /note="BRG1-associated factor 60C; 60 kDa
                     BRG-1/Brm-associated factor subunit C; mBAF60c; SWI/SNF
                     related, matrix associated, actin dependent regulator of
                     chromatin, subfamily d, member 3"
                     /calculated_mol_wt=54855
     Site            2
                     /site_type="acetylation"
                     /note="N-acetylalanine.
                     /evidence=ECO:0000250|UniProtKB:Q6STE5; propagated from
                     UniProtKB/Swiss-Prot (Q6P9Z1.2)"
     Region          27..102
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot (Q6P9Z1.2)"
     Site            178
                     /site_type="phosphorylation"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q6STE5; propagated from
                     UniProtKB/Swiss-Prot (Q6P9Z1.2)"
     Region          265..338
                     /region_name="SWIB_BAF60C"
                     /note="SWIB domain found in BRG1-associated factor 60C
                     (BAF60C) and similar proteins; cd17676"
                     /db_xref="CDD:349495"
     Site            order(281,284..285,287..288,291..292,297,302..303,305,322,
                     325..326)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349495"
     CDS             1..483
                     /gene="Smarcd3"
                     /gene_synonym="1500001J14Rik; 2210409C08Rik; BAF60C"
                     /coded_by="NM_025891.3:145..1596"
                     /db_xref="CCDS:CCDS19126.1"
                     /db_xref="GeneID:66993"
                     /db_xref="MGI:MGI:1914243"
ORIGIN      
        1 maadevagga rkatksklfe flvhgvrpgm psgarmphqg apmgppgspy mgspavrpgl
       61 apagmepark raapppgqsq aqgqgqpvpt aparsrsakr rkmadkilpq rirelvpesq
      121 aymdllafer kldqtimrkr vdiqealkrp mkqkrklrly isntfnpakp daedsdgsia
      181 swelrvegkl lddpskqkrk fssffkslvi eldkdlygpd nhlvewhrtp ttqetdgfqv
      241 krpgdlsvrc tlllmldyqp pqfkldprla rllglhtqsr saivqalwqy vktnrlqdsh
      301 dkeyingdky fqqifdcprl kfseipqrlt alllppdpiv inhvisvdps dqkktacydi
      361 dveveeplkg qmssfllsta nqqeisalds kihetiesin qlkiqrdfml sfsrdpkgyv
      421 qdllrsqsrd lkvmtdvagn peeerraefy hqpwsqeavs ryfyckiqqr rqeleqslvv
      481 rnt
//
