LOCUS       NM_029181                743 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus Slx-like 1 (Slxl1), mRNA.
ACCESSION   NM_029181 XM_001471966 XM_486684 XM_976915
VERSION     NM_029181.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Moretti C, Blanco M, Ialy-Radio C, Serrentino ME, Gobe C, Friedman
            R, Battail C, Leduc M, Ward MA, Vaiman D, Tores F and Cocquet J.
  TITLE     Battle of the Sex Chromosomes: Competition between X and Y
            Chromosome-Encoded Proteins for Partner Interaction and Chromatin
            Occupancy Drives Multicopy Gene Expression and Evolution in Muroid
            Rodents
  JOURNAL   Mol Biol Evol 37 (12), 3453-3468 (2020)
   PUBMED   32658962
  REMARK    GeneRIF: Battle of the Sex Chromosomes: Competition between X and Y
            Chromosome-Encoded Proteins for Partner Interaction and Chromatin
            Occupancy Drives Multicopy Gene Expression and Evolution in Muroid
            Rodents.
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Kruger AN, Brogley MA, Huizinga JL, Kidd JM, de Rooij DG, Hu YC and
            Mueller JL.
  TITLE     A Neofunctionalized X-Linked Ampliconic Gene Family Is Essential
            for Male Fertility and Equal Sex Ratio in Mice
  JOURNAL   Curr Biol 29 (21), 3699-3706 (2019)
   PUBMED   31630956
REFERENCE   3  (bases 1 to 743)
  AUTHORS   Comptour A, Moretti C, Serrentino ME, Auer J, Ialy-Radio C, Ward
            MA, Toure A, Vaiman D and Cocquet J.
  TITLE     SSTY proteins co-localize with the post-meiotic sex chromatin and
            interact with regulators of its expression
  JOURNAL   FEBS J 281 (6), 1571-1584 (2014)
   PUBMED   24456183
REFERENCE   4  (bases 1 to 743)
  AUTHORS   Cocquet J, Ellis PJ, Mahadevaiah SK, Affara NA, Vaiman D and
            Burgoyne PS.
  TITLE     A genetic basis for a postmeiotic X versus Y chromosome
            intragenomic conflict in the mouse
  JOURNAL   PLoS Genet 8 (9), e1002900 (2012)
   PUBMED   23028340
  REMARK    Erratum:[PLoS Genet. 2019 Jul 22;15(7):e1008290. PMID: 31329581]
REFERENCE   5  (bases 1 to 743)
  AUTHORS   Zhuang XJ, Hou XJ, Liao SY, Wang XX, Cooke HJ, Zhang M and Han C.
  TITLE     SLXL1, a novel acrosomal protein, interacts with DKKL1 and is
            involved in fertilization in mice
  JOURNAL   PLoS One 6 (6), e20866 (2011)
   PUBMED   21698294
REFERENCE   6  (bases 1 to 743)
  AUTHORS   Cocquet J, Ellis PJ, Yamauchi Y, Riel JM, Karacs TP, Rattigan A,
            Ojarikre OA, Affara NA, Ward MA and Burgoyne PS.
  TITLE     Deficiency in the multicopy Sycp3-like X-linked genes Slx and Slxl1
            causes major defects in spermatid differentiation
  JOURNAL   Mol Biol Cell 21 (20), 3497-3505 (2010)
   PUBMED   20739462
  REMARK    GeneRIF: Slx and Slxl1 are important for normal sperm
            differentiation and male fertility.
REFERENCE   7  (bases 1 to 743)
  AUTHORS   Reynard LN, Turner JM, Cocquet J, Mahadevaiah SK, Toure A, Hoog C
            and Burgoyne PS.
  TITLE     Expression analysis of the mouse multi-copy X-linked gene
            Xlr-related, meiosis-regulated (Xmr), reveals that Xmr encodes a
            spermatid-expressed cytoplasmic protein, SLX/XMR
  JOURNAL   Biol Reprod 77 (2), 329-335 (2007)
   PUBMED   17475928
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL929008.19 and AK015913.1.
            
            On or before Aug 19, 2009 this sequence version replaced
            XM_486684.3, XM_001471966.1, XM_976915.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015913.1, BY715473.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-16                AL929008.19        64160-64175
            17-730              AK015913.1         18-731
            731-743             AL929008.19        81008-81020
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 30.06 cM"
     gene            1..743
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /note="Slx-like 1"
                     /db_xref="GeneID:75140"
                     /db_xref="MGI:MGI:1922390"
     exon            1..94
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            95..229
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             121..588
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /codon_start=1
                     /product="Slx-like 1"
                     /protein_id="NP_083457.1"
                     /db_xref="CCDS:CCDS53074.1"
                     /db_xref="GeneID:75140"
                     /db_xref="MGI:MGI:1922390"
                     /translation="MALKKLWAIPKDGYLLLLDYDDEDDDINFLEDAHSEENVSFSEE
                     WQRFASSVETPIENRNLLSGEQQDGNASKLDLMEEQNPVTHDDENEIPEEIVGDTREM
                     INNKSCEQYKTTFQKFDMDVQNFNEQQEKSVGLMNLETNNSDMLFDVDGELRK"
     exon            230..355
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            356..419
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            420..519
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            520..743
                     /gene="Slxl1"
                     /gene_synonym="4930527E24Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtccgggcat cgttgctgac aacggttttt ttaccattga ggagctgagc gtggaagggt
       61 gcagttgtga aggtgttcac ctctgagata acctaagaca tctgagtgct taaaagaaaa
      121 atggctctta agaaactgtg ggcgatacca aaggacggtt acttattact tcttgactat
      181 gatgatgaag acgatgacat aaattttttg gaggacgctc attctgaaga aaacgtaagt
      241 ttctcagagg aatggcagcg ttttgcaagt tctgtagaga caccaataga aaacaggaat
      301 ttgttaagtg gtgaacagca agatgggaat gcttcaaaat tggatcttat ggaagaacag
      361 aatccagtaa ctcatgatga tgagaatgaa attcctgaag aaatcgttgg agatacacgg
      421 gagatgatca acaacaagtc gtgtgagcag tataaaacta catttcagaa gtttgatatg
      481 gatgtccaga atttcaatga acagcaagaa aaatcagtgg gtttgatgaa cttggagacc
      541 aacaactccg atatgctttt tgatgtagat ggtgaattga gaaaatgaat gtctgtgttt
      601 aaaagagaca tcatgaagca tactctgaag tactcatcta cattcccatc ttgagaataa
      661 tgaagcatgc aaatttttca cttgatagta catttctaag caaataaaaa atccgctaac
      721 tttttgtctc ttatgaaaca gag
//
