LOCUS       NM_172658               2394 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus solute carrier organic anion transporter family,
            member 4C1 (Slco4c1), mRNA.
ACCESSION   NM_172658 XM_982717
VERSION     NM_172658.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Jones,M.R., Lingampally,A., Ahmadvand,N., Chong,L., Wu,J.,
            Wilhem,J., Vazquez-Armendariz,A.I., Ansari,M., Herold,S.,
            Ornitz,D.M., Schiller,H.B., Chao,C.M., Zhang,J.S., Carraro,G. and
            Bellusci,S.
  TITLE     FGFR2b signalling restricts lineage-flexible alveolar progenitors
            during mouse lung development and converges in mature alveolar type
            2 cells
  JOURNAL   Cell Mol Life Sci 79 (12), 609 (2022)
   PUBMED   36445537
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Rutledge,E.A., Benazet,J.D. and McMahon,A.P.
  TITLE     Cellular heterogeneity in the ureteric progenitor niche and
            distinct profiles of branching morphogenesis in organ development
  JOURNAL   Development 144 (17), 3177-3188 (2017)
   PUBMED   28705898
REFERENCE   3  (bases 1 to 2394)
  AUTHORS   Zhang,Y., Li,F., Wang,Y., Pitre,A., Fang,Z.Z., Frank,M.W.,
            Calabrese,C., Krausz,K.W., Neale,G., Frase,S., Vogel,P., Rock,C.O.,
            Gonzalez,F.J. and Schuetz,J.D.
  TITLE     Maternal bile acid transporter deficiency promotes neonatal demise
  JOURNAL   Nat Commun 6, 8186 (2015)
   PUBMED   26416771
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2394)
  AUTHORS   Thiagarajan,R.D., Georgas,K.M., Rumballe,B.A., Lesieur,E.,
            Chiu,H.S., Taylor,D., Tang,D.T., Grimmond,S.M. and Little,M.H.
  TITLE     Identification of anchor genes during kidney development defines
            ontological relationships, molecular subcompartments and regulatory
            pathways
  JOURNAL   PLoS One 6 (2), e17286 (2011)
   PUBMED   21386911
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2394)
  AUTHORS   Pfister,S., Jones,V.J., Power,M., Truisi,G.L., Khoo,P.L.,
            Steiner,K.A., Kanai-Azuma,M., Kanai,Y., Tam,P.P. and Loebel,D.A.
  TITLE     Sox17-dependent gene expression and early heart and gut development
            in Sox17-deficient mouse embryos
  JOURNAL   Int J Dev Biol 55 (1), 45-58 (2011)
   PUBMED   21305474
REFERENCE   6  (bases 1 to 2394)
  AUTHORS   Cheng,X. and Klaassen,C.D.
  TITLE     Tissue distribution, ontogeny, and hormonal regulation of
            xenobiotic transporters in mouse kidneys
  JOURNAL   Drug Metab Dispos 37 (11), 2178-2185 (2009)
   PUBMED   19679677
REFERENCE   7  (bases 1 to 2394)
  AUTHORS   Wirth,E.K., Roth,S., Blechschmidt,C., Holter,S.M., Becker,L.,
            Racz,I., Zimmer,A., Klopstock,T., Gailus-Durner,V., Fuchs,H.,
            Wurst,W., Naumann,T., Brauer,A., de Angelis,M.H., Kohrle,J.,
            Gruters,A. and Schweizer,U.
  TITLE     Neuronal 3',3,5-triiodothyronine (T3) uptake and behavioral
            phenotype of mice deficient in Mct8, the neuronal T3 transporter
            mutated in Allan-Herndon-Dudley syndrome
  JOURNAL   J Neurosci 29 (30), 9439-9449 (2009)
   PUBMED   19641107
REFERENCE   8  (bases 1 to 2394)
  AUTHORS   Combes,A.N., Lesieur,E., Harley,V.R., Sinclair,A.H., Little,M.H.,
            Wilhelm,D. and Koopman,P.
  TITLE     Three-dimensional visualization of testis cord morphogenesis, a
            novel tubulogenic mechanism in development
  JOURNAL   Dev Dyn 238 (5), 1033-1041 (2009)
   PUBMED   19334288
REFERENCE   9  (bases 1 to 2394)
  AUTHORS   Brunskill,E.W., Aronow,B.J., Georgas,K., Rumballe,B.,
            Valerius,M.T., Aronow,J., Kaimal,V., Jegga,A.G., Yu,J.,
            Grimmond,S., McMahon,A.P., Patterson,L.T., Little,M.H. and
            Potter,S.S.
  TITLE     Atlas of gene expression in the developing kidney at microanatomic
            resolution
  JOURNAL   Dev Cell 15 (5), 781-791 (2008)
   PUBMED   19000842
  REMARK    Erratum:[Dev Cell. 2009 Mar;16(3):482. Yu, Jing [added]]
REFERENCE   10 (bases 1 to 2394)
  AUTHORS   Willnow,T., Antignac,C., Brandli,A., Christensen,E., Cox,R.,
            Davidson,D., Davies,J., Devuyst,O., Eichele,G., Hastie,N.,
            Verroust,P., Schedl,A. and Meij,I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK049253.1.
            
            On Jun 3, 2007 this sequence version replaced NM_172658.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY654588.1, AK049253.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 47.76 cM"
     gene            1..2394
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /note="solute carrier organic anion transporter family,
                     member 4C1"
                     /db_xref="GeneID:227394"
                     /db_xref="MGI:MGI:2442784"
     exon            1..405
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            406..669
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            670..849
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            850..946
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1068
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1069..1187
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1188..1332
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1333..1528
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1529..1682
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1683..1867
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1868..1932
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            1933..2070
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
     exon            2071..2394
                     /gene="Slco4c1"
                     /gene_synonym="9530051F04; C330017E21Rik; OATP-H; OATP-M1;
                     oatp-R; OATP4C1; OATPX; PRO2176; SLC21A20"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaaaagaaa ccagcctttg ccgatcgtac tcacacagga gtctagagaa cctttcttga
       61 ccatgcaggg ctccaaagga atagagaacc cggctttcgt cccttccagc ccaggcaccc
      121 cacgccgtgc gtctgcttcg ccctcccagg tggaggtctc tgctgtggcc tccaggaatc
      181 agaatggggg ttcgcagcct cgggaatctg aggagcctca gaagtcaact gagccatccc
      241 cgccttcttc gaatccccca gcttctgatg agccgccggg gtcacagcta agcgagcttg
      301 aggagggacc ttgcgggtgg aggggctttc acccccagtg tctccagcgc tgcaacaccc
      361 cccaaggctt tttgcttcac tactgtctct tagccctaac gcaaggtatt gtagtaaacg
      421 gcctggtaaa cattagcatc tccaccattg agaagcgtta tgaaatgaaa agctcactga
      481 caggcctgat atcatcgagc tacgacatct ccttttgtgt gttatctcta tttgtgtctt
      541 tctttgggga gagaggacac aaacctcgct ggctcgcctt tgcatccttt atgataggcc
      601 tgggagcgct ggtgttttcc ttaccacact tcttcagtgg aagatatgaa ctgggatcca
      661 tttttgaaga tacgtgctta acaaggaaca gtaccagatg ttcatcttca acctccctgc
      721 tttctaacta cttctatgtc tttgtcctgg gacaattgtt gctggggacc ggagggactc
      781 cgctctacac cctggggaca gcctttattg atgactctgt gcccacacac aaatcttctc
      841 tctatatagg tattggctat tctatgtcaa tcctaggccc tgccattgga tatgtgttgg
      901 gtggacagct gttgacaatg tacattgata ttgctatggg acaaagttcg gatctgactg
      961 aggatgatcc ccggtggctg ggggcttggt ggattggatt ccttttagct tggctctttg
     1021 cttggtcttt gataatgcct ttctcctgtt ttcccaagca tttaccaggg acagcaaaaa
     1081 ttcaagctgg caaaacttcc cagactcatc aaaataatag tacttccttc caacatacgg
     1141 atgaaaattt tggaaaaagt attaaagatt ttccaactgc tgtaaagaat ttgatgagga
     1201 atacagtctt tatatgttta gttctatcaa ctacttctga agcattaatt actacgggat
     1261 ttgccacatt tttacctaaa tttatagaaa atcaatttgg attgacatcg agctttgcag
     1321 ccactcttgg aggggctgtt ttaattcctg gagctgctct tggtcaaatc ttaggtggtg
     1381 ttcttgtttc aaaattcaaa atgaagtgta aaaatacaat gaagtttgcc ttatgtacat
     1441 ctggagtagc acttgtgctg agttttgtat ttatttatgc aaaatgtgaa aatgagccat
     1501 ttgctggtgt gtctgaatca tataatggaa ctggagaaat ggggaatttg actgcacctt
     1561 gtaatgccaa ctgcaactgt ttgcggtcct actattaccc actctgtgga agtgatggaa
     1621 tccagtattt ttctccctgc tttgcaggtt gtttaaactc agtttcaaac aggaaaccca
     1681 aggtatatta taattgttcc tgtatagaaa ggaaaatcac ttctactgca gaaagtactg
     1741 attttgaagc taaagctgga aaatgtagaa ctcggtgttc aaacttgccc atatttcttg
     1801 gcattttctt cattacagtt atctttacct ttatggcagg cactcctata actgtgtcta
     1861 tattaaggtg tgttaatcac agacatcggt ctctagcatt gggagtgcag ttcatgcttc
     1921 ttcgattgct aggtacaata cctgggccaa ttatatttgg tgtcataata gacagcacat
     1981 gtgttctgtg ggatgtcaat gaatgtggaa taaaaggagc atgttggatt tatgataaca
     2041 tcaagatggc acatatgctg gtagctataa gtgttacttg taaagttatc accatattct
     2101 tcaatggact tgcgattgtt ctctataaac caccgccccc aggaacagag gtatcatttc
     2161 aaagtcagaa tgtcattgtg tctactattt cggtcgaaga ggatctagac aaagcagaaa
     2221 atgaagggtg aaaaggagga ggagattgct ttgggaactg gctcctgcct gtgagaacat
     2281 cctgtgccaa ggcaccattg tctagttgtg tagaccacgg tgtgaaaccc atgctccaga
     2341 acggaggtga tcattgccta ggtacagatt cctcattttc ttaaaacaaa caac
//
