LOCUS       NM_001007567            1525 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 7, member 6 opposite strand
            (Slc7a6os), transcript variant 1, mRNA.
ACCESSION   NM_001007567 XM_134478
VERSION     NM_001007567.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Nagamachi,A., Matsui,H., Asou,H., Ozaki,Y., Aki,D., Kanai,A.,
            Takubo,K., Suda,T., Nakamura,T., Wolff,L., Honda,H. and Inaba,T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
REFERENCE   3  (bases 1 to 1525)
  AUTHORS   Tang,F., Barbacioru,C., Nordman,E., Bao,S., Lee,C., Wang,X.,
            Tuch,B.B., Heard,E., Lao,K. and Surani,M.A.
  TITLE     Deterministic and stochastic allele specific gene expression in
            single mouse blastomeres
  JOURNAL   PLoS One 6 (6), e21208 (2011)
   PUBMED   21731673
REFERENCE   4  (bases 1 to 1525)
  AUTHORS   Keegan,C.E., Hutz,J.E., Else,T., Adamska,M., Shah,S.P., Kent,A.E.,
            Howes,J.M., Beamer,W.G. and Hammer,G.D.
  TITLE     Urogenital and caudal dysgenesis in adrenocortical dysplasia (acd)
            mice is caused by a splicing mutation in a novel telomeric
            regulator
  JOURNAL   Hum Mol Genet 14 (1), 113-123 (2005)
   PUBMED   15537664
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK146733.1 and AC133195.4.
            
            On Dec 12, 2009 this sequence version replaced NM_001007567.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK146733.1, BC054118.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1246              AK146733.1         2-1247
            1247-1525           AC133195.4         26704-26982
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 53.11 cM"
     gene            1..1525
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /note="solute carrier family 7, member 6 opposite strand"
                     /db_xref="GeneID:66432"
                     /db_xref="MGI:MGI:1916951"
     exon            1..215
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             21..941
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /note="protein SLC7A6OS; solute carrier family 7 member 6
                     opposite strand transcript homolog"
                     /codon_start=1
                     /product="probable RNA polymerase II nuclear localization
                     protein SLC7A6OS"
                     /protein_id="NP_001007568.1"
                     /db_xref="CCDS:CCDS22632.1"
                     /db_xref="GeneID:66432"
                     /db_xref="MGI:MGI:1916951"
                     /translation="MEAGRTAVLRVKRKRNAEPAEALVLACKRPRSSEVESAARETPE
                     GQEAAAAERNVFQLVATVRSQEEPIQQLVRAALRPSRSSQLRIRRDLRASVREVRKEG
                     RYRVVSSHRSSGTSNSLEPQCGSEAVGDAGFQLLDLVHEEENPEAAATDCRKTSDPDV
                     ILCNSVELIRERLTVSEDGSQVNHQEDPKHNDDYVYDIYYMEMAPPGWIENIMSVQPY
                     SQEWELVNDDEQSEDIYEDEDDENSENNWRNEYPDEESSDRDEDSRGSDEYNSLSEEE
                     RSCERLMWSKYPLDVQKEFDYDSPHGLDSD"
     exon            216..482
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            483..692
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            693..813
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            814..1525
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1226..1231
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1248
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
     regulatory      1499..1504
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1525
                     /gene="Slc7a6os"
                     /gene_synonym="2010007L18Rik; 2400002F02Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtactccgc gatcgccgct atggaggccg gcaggactgc ggtgttgcgc gtgaagcgga
       61 agcgcaacgc ggagcccgcc gaggcgctcg tgctggcctg taaacgcccc cggagcagcg
      121 aggtcgagtc ggcggctcgg gagacgccag agggccagga ggcggcggcg gcggagagaa
      181 atgtcttcca gttggttgcc accgtgcgat cccaggagga gccaatccag cagcttgtgc
      241 gggctgcctt gcgcccgtcc cggagcagcc agctgcgtat ccgccgcgat cttcgtgcct
      301 cggtgcgcga ggtccgtaaa gagggccgct acagggtggt ctccagccac cgatcctcgg
      361 gaacctcgaa cagtttggag cctcagtgtg ggtcagaagc tgtcggggat gcgggcttcc
      421 agttgttgga cctggtccac gaggaggaaa acccagaggc tgctgccacc gactgccgca
      481 aaacatctga tccagatgtg atcctctgca attctgtaga gttgatccgt gagaggctga
      541 ctgtatccga ggatggatcc caagtaaacc accaggagga cccaaagcac aatgacgact
      601 atgtatatga catttactat atggagatgg cccctccagg gtggattgag aacatcatgt
      661 ccgtgcagcc ctacagccag gaatgggagc tggtaaatga tgatgagcag tcagaagata
      721 tttatgaaga tgaagatgat gaaaacagtg aaaataactg gcggaatgag tacccggatg
      781 aagaaagcag tgatagagat gaagattcca gaggctctga tgaatacaac agcctcagcg
      841 aggaggaaag aagctgcgag cgactgatgt ggagcaaata ccctttggat gtacaaaagg
      901 agtttgacta tgacagcccc catggtctgg attcagattg atggtttgct ggtatttgtg
      961 agattcttcc atgggccttt aaggctctga ctacagagtc atcatcttag gattcctaac
     1021 tgaacatgtg gaaagaaaag cctttacccc agcacagtga ggacttcctt gtaagtgata
     1081 agtgacgcca aacacgctgg gtcatgtctg taattccagc attggagagt ttgggagcca
     1141 agaagagcac tgagaataca aggccagcct ttagactaaa cagcctgggc attctatttt
     1201 taaaaagtga tcttacactc tggaaaataa aatgatgtaa aacctccatc cctggtggtt
     1261 tttctgtcat tttacttata tgctcagggc taaagaagct ggtgggagga gggagagccc
     1321 gctcccagtg atggagatga tctctgcaag gacaacagtg actcccccgc ctcagggcgg
     1381 tcatgtcttt cccccccccc cccccccgcc ccctttagac tctgataatg gttataaaga
     1441 ctgctatcac ctttggcagt ggtaccaagg aacagtatgt atgaatgtga tgatctttaa
     1501 taaaaactta actttttaca cagaa
//
