LOCUS       XM_011250910            3092 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus solute carrier family 6 member 21
            (Slc6a21), transcript variant X4, mRNA.
ACCESSION   XM_011250910
VERSION     XM_011250910.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..3092
                     /gene="Slc6a21"
                     /gene_synonym="1700039E15Rik; Gm19188"
                     /note="solute carrier family 6 member 21; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 7 ESTs, 8 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:76713"
                     /db_xref="MGI:MGI:1923963"
     CDS             443..2629
                     /gene="Slc6a21"
                     /gene_synonym="1700039E15Rik; Gm19188"
                     /codon_start=1
                     /product="solute carrier family 6 (neurotransmitter
                     transporter)-like isoform X3"
                     /protein_id="XP_011249212.1"
                     /db_xref="GeneID:76713"
                     /db_xref="MGI:MGI:1923963"
                     /translation="MDQSFEDFLELKNKPVEEVHTASKKSDNPTSVSRGFRTREVRVT
                     KIPNHFQAKKTENILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYFILLLLLGIPLM
                     YMEMVIGQWLRMDNIQAWKYLVPWLSGVGYSNILACVLVVLYNSALVSWSLFYLGQSF
                     DYPLPWQNCPLVENLSMVASNQMEEGIEVLVLNVTLCLFATWIFLYVTMVTRIKISVL
                     MMIFSILFSNVLLLCFFIRTLFLNGSVRASLWRLVTIELSILSSLDAWRQAGGHVLYS
                     LGLGMGTIITFSTYQPRGENYIKWASFVAMVNLATSLLSSFVIFLVMGFWTTTSGTMC
                     IKRSVSNLINLIANGVLPKAAWPPGDIIHKPPLEYLAWINQLPNNLKSQVIHQTLPCS
                     ILIQKEKIMEGPGLSYVAFSQAISLFPGSSFWAIIFFMSLAIMGLGTMLTLLEGIVLP
                     LQKSISTFAKHPNLVQVLVCLGGFLGSLVFSSRPGSYVVFLFDDLLVPMVLIIIVVIQ
                     NLSLAWLYGIKRFRAEVFGQLGSLVWSPFTFLWSYVTLPTLLVLLTIYFLNLYYSGSP
                     YYVSWNDSMSHEVKQPYKKIPLGWVTFLSVLALLPILVYPLQHWWYLDDPNICETLEK
                     PLSSKKTVTVPNRVTQWPVHPMRKLTLRNQEKSKALFQSKSPPENFLHPQTLITKKDS
                     ENYSTFSLPDATLPSQVGFSTLAIHEVSKYTGHSESFLDSQNTGKK"
ORIGIN      
        1 ggtgacgtca caggccagct cgttgggaca gagagggaag tagccgcttc ccgcgcgggt
       61 tctcggacca cgggggccgc gacgacgtgg gactctccgc ccacgagcgg cgcggggccg
      121 aggttcacgc gctgaggcgg gtacggacca ctgagtcagt cccgaccgct agccctgccc
      181 acttggaagc ccgtccacgg cgaggccgcc gtttccttcc tggccgcgcg ggggcgccgt
      241 cgggacgctg ctggcggggc tgtctcgatt taggaagccg accaaaggcc ttgaacctta
      301 aactaaaact tcaaatgtca accagacaac tggagaggca gagagcttag cagctaagag
      361 gcctaccaca gacataggca ctcccaacag cttatatcat cagctccggg agatcaggag
      421 tcgagccagt gcagagagca ccatggacca atcctttgaa gactttctag aactcaagaa
      481 caagcccgtg gaggaagtgc acacagcaag caagaagagc gacaacccca catctgtgtc
      541 ccggggcttc aggaccagag aggtccgcgt taccaagatc ccaaaccact tccaggctaa
      601 gaagacggag aatatcctaa tcctggtggc cttctccatc ggactcggca gcacgtggcg
      661 cttcccgtac ctctgccacc agaacggagg cggaagcttt ctgctgatgt atttcatcct
      721 tctcctgctc ctgggcatcc ccctcatgta catggagatg gtcattggac agtggctacg
      781 tatggacaac atccaggcct ggaaatatct ggtcccctgg cttagtggtg tgggctactc
      841 caacatactg gcttgtgtct tggtggtcct gtataacagt gccctggtct cctggagcct
      901 tttctacctt ggccagtcct tcgattaccc tctaccctgg caaaactgcc ccttggtaga
      961 aaacttaagc atggttgcct ccaatcaaat ggaagaaggg atagaggtgc tggtcctgaa
     1021 cgtgaccctg tgcctctttg ccacgtggat cttcctctat gtcaccatgg tcaccaggat
     1081 aaagatctca gtgctaatga tgattttctc catattgttc tccaacgtcc tcctcctctg
     1141 cttcttcatc cgcaccctct tcctgaacgg cagcgtgagg gccagcctct ggcgcctggt
     1201 gaccatagag ctttccatcc tgtcatcact ggacgcatgg cgtcaggctg gaggccatgt
     1261 tctctactcc ctcggcctcg gcatgggcac tatcataact ttctccacct accagcctag
     1321 aggtgagaat tacatcaagt gggcctcctt tgtggccatg gtcaacctgg cgacttcgtt
     1381 gctgagctca ttcgtcatct tcctcgtgat gggcttctgg accacaacca gcggcactat
     1441 gtgtattaag aggagtgtct ccaatctgat caacctgata gccaacgggg tcctccccaa
     1501 ggccgcctgg cctcccggag acatcatcca taaaccccca ctggaatacc tagcctggat
     1561 caaccagctt cccaacaact taaagagtca ggtcatccat caaaccctgc cctgcagcat
     1621 cctgatacaa aaggaaaaga ttatggaggg ccctggcctg tcgtatgtgg ccttctctca
     1681 agccatctca ctgtttcccg gctcctcttt ctgggccatc atcttcttca tgtccctggc
     1741 tatcatgggt ctgggcacca tgctaactct cctggagggc atcgtgcttc ctctgcagaa
     1801 aagcatctct acctttgcaa agcatcccaa tctggtacaa gtgcttgtct gcttgggagg
     1861 atttctgggg agcctcgtct tctccagccg ccctggcagc tacgtggtat tcctgttcga
     1921 tgacctcctg gtccccatgg tgctcatcat aattgtggtg atccagaacc tgtctctggc
     1981 ttggctctat ggaatcaaga ggttcagggc tgaggtgttc ggccagctgg gcagcctggt
     2041 gtggtcaccc ttcaccttcc tgtggagcta cgtgacgttg cccacactgt tggtcctgct
     2101 caccatctac ttcctgaatc tctactacag tggatccccc tactatgtct cctggaatga
     2161 tagcatgagc catgaagtga agcagcctta caaaaagata cccctgggct gggtcacctt
     2221 cctcagtgtc ctggcactgc tgccgatcct cgtgtacccg ctgcagcact ggtggtatct
     2281 ggatgaccca aacatctgtg aaaccttaga aaagcctctg tcctccaaaa agacagtcac
     2341 ggtgcccaac agagtcaccc agtggcctgt gcaccccatg aggaaactca ccctccgaaa
     2401 tcaggagaaa agcaaggctt tattccaaag caagagtccc ccggagaact tccttcaccc
     2461 ccagaccctg ataacaaaaa aggacagtga gaactattcc accttcagct tgcccgatgc
     2521 cacgcttcct tctcaggttg gcttctccac cttggccatc catgaggtgt caaagtacac
     2581 cggccactca gaatcctttt tggactccca aaacactgga aagaagtgac aggcttgcga
     2641 cttgtgaagg agaggctcgt gagagccctg cttagcagcg gccagccaca tcgtcgggtc
     2701 tcggtaacca gtgatgggcg ccaagccttt agcacaggca aggccccacg gaaagcaaaa
     2761 gacagggtat gcagacccca gcccagactt ctgcgggagc ccccacggcc cccagacagt
     2821 catggatgac gcattggtcc atcctctagc actggacact gtgcccaggg caggccccag
     2881 gccgccttcc ctctctttga tacggacaca attttggtgt gcccagatgg gcatctggca
     2941 cagtcccagt taccgagaga cacagtgatc cccctaaccc tgcctagcca tcgtacctgt
     3001 cagaagtgag gctgacctcc cagggatggc catcacagat ggcaccaaga tagcaatgtt
     3061 gcctgtcaat aaatgaggcg gtggacgaca ca
//
