LOCUS       NM_145384               1546 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus solute carrier family 66 member 1 (Slc66a1),
            transcript variant 1, mRNA.
ACCESSION   NM_145384
VERSION     NM_145384.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Lewandowski JP, Du F, Zhang S, Powell MB, Falkenstein KN, Ji H and
            Vokes SA.
  TITLE     Spatiotemporal regulation of GLI target genes in the mammalian limb
            bud
  JOURNAL   Dev Biol 406 (1), 92-103 (2015)
   PUBMED   26238476
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL807811.9, BB844529.1, AK081661.1, AV004103.1 and AW047594.1.
            
            [WARNING] On Oct 19, 2023 this sequence was replaced by
            NM_145384.4.
            
            On Oct 4, 2017 this sequence version replaced NM_145384.2.
            
            CCDS Note: The coding region has been updated to extend the
            N-terminus by 65 codons  and to alter the C-terminus to show an
            alternate 3' CDS, which represent a CDS that is more supported by
            available conservation data. The updated 5' and 3' coding regions
            create 4 complete transmembrane domains according to SwissProt
            accession Q8C4N4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK156668.1, SRR17253014.1107962.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-8                 AL807811.9         187117-187124       c
            9-39                BB844529.1         1-31
            40-1414             AK081661.1         19-1393
            1415-1528           AV004103.1         108-221
            1529-1546           AW047594.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 70.63 cM"
     gene            1..1546
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /note="solute carrier family 66 member 1"
                     /db_xref="GeneID:212555"
                     /db_xref="MGI:MGI:2384837"
     exon            1..80
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            81..202
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            203..450
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            451..580
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            581..668
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            669..811
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            812..904
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1090
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1091..1530
                     /gene="Slc66a1"
                     /gene_synonym="Pqlc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggggcggga cttcgcggag gtcagctgat cccggcgggc tcggatcctg aagctgacac
       61 cggctgtgga tcttgaactg gttgtcatgc acgcagagtg accacatagg aactctgtgc
      121 aggtggcaag gactgagagg gtgtctttct tcctgctcct tcaaccagcc atactctggc
      181 ttgggctgtg gcttccttgt aggataaacc tttgccagcc tctgacccct tggctgtgtt
      241 catacacctg taccttcttt cccgctgaga ccctccctct gcagccatgg tctggaggac
      301 actgggcgcc agcaactttt ccacctgtcc caatggctct gtccagtgga tctgggatgt
      361 gtttggtgaa tgtgcccagg atggctggga tgaggccagc gtgggcctgg gcttggtctc
      421 cattctctgc ttcgctgcgt ctaccttccc ccagtacatc aaagcctgca agacaggcaa
      481 catggaccag gccctatcac tgtggttcct gctgggctgg atcggtggag attcctgcaa
      541 cctcattggc tcctttctgg cagaccagct acccctgcag acctacacgg ctgtgtatta
      601 tgtcctggcc gacctgatga tgctgacgct gtacttccat tataagttca agaagcgacc
      661 ttctccgttg tctgccccta tcaattctgt gctcttgttc atcttgggga cggtgtgtat
      721 cacaccactg ttgagcagca ctgatcctgt ggctgtcccc agggaaggct tccgggggcg
      781 gacactcctg tctgtggagc caggcaataa gcccttcaca aagaaggagg tcatcggctt
      841 tgtcatcggc tccgcctcca gcttgctgta cctgctctcg aggctgcctc agattcgcac
      901 caatttcata cggcagtcaa cccaaggcat ctcctactcg ctgttcgcac tggtgatgct
      961 ggggaacacg ctgtacgggc tcagcgtgct gctcaagaac cccgaggtgg gccagagtga
     1021 gggcagctac ctgctgcacc acctgccctg gctcgtgggc agcctggggg tgctgctgct
     1081 cgacaccatc atctccatcc agttcctggt gtacagaagc catgagactg ctgctgcctc
     1141 agagcgagag cccctcctcc ccagctgatc atcgtcctgg atgatgggaa cctcagctgc
     1201 caaaccagga aggatgaggt gtgggcagag atactgccgc cgctggactg ggcctagggg
     1261 gctgcctgga actctgggcc tggctgccta gaactcctcc tgaccttcag acagatctgg
     1321 agttggcttg tgctgcacag gggcatacat ctcaggtgta tgacagctgc ccgaggagcc
     1381 tctagggcac ccatagctga gaccccagaa gacggtatgg tcacctccca tctacctacc
     1441 tcaatctgac tgtactcttg gttacatcat agtcagggga cccagggttg tccctctgac
     1501 tggatacaac ctagtaaatg gtaccttcca aaaaaaaaaa aaaaaa
//
