LOCUS       NM_011403               4584 bp    mRNA    linear   ROD 05-FEB-2024
DEFINITION  Mus musculus solute carrier family 4 (anion exchanger), member 1
            (Slc4a1), mRNA.
ACCESSION   NM_011403 NM_027792
VERSION     NM_011403.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4584)
  AUTHORS   Zhu,M., Ma,X., Huang,J., Lu,F.G., Chen,Y., Hu,J., Cheng,L.,
            Zhang,B., Liu,W. and Li,L.
  TITLE     Extracellular vesicle-derived miR-1249-5p regulates influenza A
            virus-induced acute lung injury in RAW246.7 cells through targeting
            SLC4A1
  JOURNAL   Microbes Infect 24 (8), 104998 (2022)
   PUBMED   35533989
  REMARK    GeneRIF: Extracellular vesicle-derived miR-1249-5p regulates
            influenza A virus-induced acute lung injury in RAW246.7 cells
            through targeting SLC4A1.
REFERENCE   2  (bases 1 to 4584)
  AUTHORS   Mattebo,A., Sen,T., Jassinskaja,M., Pimkova,K., Prieto
            Gonzalez-Albo,I., Alattar,A.G., Ramakrishnan,R., Lang,S., Jaras,M.,
            Hansson,J., Soneji,S., Singbrant,S., van den Akker,E. and
            Flygare,J.
  TITLE     Yippee like 4 (Ypel4) is essential for normal mouse red blood cell
            membrane integrity
  JOURNAL   Sci Rep 11 (1), 15898 (2021)
   PUBMED   34354145
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4584)
  AUTHORS   Karagianni,P., Moulos,P., Schmidt,D., Odom,D.T. and Talianidis,I.
  TITLE     Bookmarking by Non-pioneer Transcription Factors during Liver
            Development Establishes Competence for Future Gene Activation
  JOURNAL   Cell Rep 30 (5), 1319-1328 (2020)
   PUBMED   32023452
REFERENCE   4  (bases 1 to 4584)
  AUTHORS   Sun,S., Zhang,D., Sun,G., Song,Y., Cai,J., Fan,Z. and Wang,H.
  TITLE     Solute carrier family 4 member 1 might participate in the
            pathogenesis of Meniere's disease in a murine endolymphatic hydrop
            model
  JOURNAL   Acta Otolaryngol 139 (11), 966-976 (2019)
   PUBMED   31536436
  REMARK    GeneRIF: protective factor in the pathogenesis of Meniere's disease
REFERENCE   5  (bases 1 to 4584)
  AUTHORS   Hinze,C., Ruffert,J., Walentin,K., Himmerkus,N., Nikpey,E.,
            Tenstad,O., Wiig,H., Mutig,K., Yurtdas,Z.Y., Klein,J.D.,
            Sands,J.M., Branchi,F., Schumann,M., Bachmann,S., Bleich,M. and
            Schmidt-Ott,K.M.
  TITLE     GRHL2 Is Required for Collecting Duct Epithelial Barrier Function
            and Renal Osmoregulation
  JOURNAL   J Am Soc Nephrol 29 (3), 857-868 (2018)
   PUBMED   29237740
REFERENCE   6  (bases 1 to 4584)
  AUTHORS   Lepke,S., Becker,A. and Passow,H.
  TITLE     Mediation of inorganic anion transport by the hydrophobic domain of
            mouse erythroid band 3 protein expressed in oocytes of Xenopus
            laevis
  JOURNAL   Biochim Biophys Acta 1106 (1), 13-16 (1992)
   PUBMED   1581325
REFERENCE   7  (bases 1 to 4584)
  AUTHORS   Alper,S.L.
  TITLE     The band 3-related anion exchanger (AE) gene family
  JOURNAL   Annu Rev Physiol 53, 549-564 (1991)
   PUBMED   2042971
  REMARK    Review article
REFERENCE   8  (bases 1 to 4584)
  AUTHORS   Hearne,C.M., McAleer,M.A., Love,J.M., Aitman,T.J., Cornall,R.J.,
            Ghosh,S., Knight,A.M., Prins,J.B. and Todd,J.A.
  TITLE     Additional microsatellite markers for mouse genome mapping
  JOURNAL   Mamm Genome 1 (4), 273-282 (1991)
   PUBMED   1794058
REFERENCE   9  (bases 1 to 4584)
  AUTHORS   Jones,G.L., Edmundson,H.M., Wesche,D. and Saul,A.
  TITLE     Human erythrocyte Band-3 has an altered N terminus in
            malaria-resistant Melanesian ovalocytosis
  JOURNAL   Biochim Biophys Acta 1096 (1), 33-40 (1990)
   PUBMED   2268683
REFERENCE   10 (bases 1 to 4584)
  AUTHORS   Love,J.M., Knight,A.M., McAleer,M.A. and Todd,J.A.
  TITLE     Towards construction of a high resolution map of the mouse genome
            using PCR-analysed microsatellites
  JOURNAL   Nucleic Acids Res 18 (14), 4123-4130 (1990)
   PUBMED   2377456
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK158143.1, BC052419.1 and W75328.1.
            
            [WARNING] On May 2, 2024 this sequence was replaced by NM_011403.3.
            
            On or before Apr 18, 2009 this sequence version replaced
            NM_027792.1, NM_011403.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK157181.1, AK172395.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135, SAMN01164140
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-160               AK158143.1         2-161
            161-4546            BC052419.1         1-4386
            4547-4584           W75328.1           313-350
FEATURES             Location/Qualifiers
     source          1..4584
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 66.29 cM"
     gene            1..4584
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /note="solute carrier family 4 (anion exchanger), member
                     1"
                     /db_xref="GeneID:20533"
                     /db_xref="MGI:MGI:109393"
     exon            1..225
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            226..308
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     CDS             294..3083
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /note="AE 1; MEB3; anion exchanger 1; anion exchange
                     protein 1; solute carrier family 4 member 1; erythrocyte
                     membrane protein band 3"
                     /codon_start=1
                     /product="band 3 anion transport protein"
                     /protein_id="NP_035533.1"
                     /db_xref="CCDS:CCDS25496.1"
                     /db_xref="GeneID:20533"
                     /db_xref="MGI:MGI:109393"
                     /translation="MGDMRDHEEVLEIPDRDSEEELENIIGQIAYRDLTIPVTEMQDP
                     EALPTEQTATDYVPSSTSTPHPSSGQVYVELQELMMDQRNQELQWVEAAHWIGLEENL
                     REDGVWGRPHLSYLTFWSLLELQKVFSKGTFLLGLAETSLAGVANHLLDCFIYEDQIR
                     PQDREELLRALLLKRSHAEDLGNLEGVKPAVLTRSGGASEPLLPHQPSLETQLYCGQA
                     EGGSEGPSTSGTLKIPPDSETTLVLVGRANFLEKPVLGFVRLKEAVPLEDLVLPEPVG
                     FLLVLLGPEAPHVDYTQLGRAAATLMTERVFRITASMAHNREELLRSLESFLDCSLVL
                     PPTDAPSEKALLNLVPVQKELLRRRYLPSPAKPDPNLYNTLDLNGGKGGPGDEDDPLR
                     RTGRIFGGLIRDIRRRYPYYLSDITDALSPQVLAAVIFIYFAALSPAVTFGGLLGEKT
                     RNLMGVSELLISTAVQGILFALLGAQPLLVLGFSGPLLVFEEAFFSFCESNNLEYIVG
                     RAWIGFWLILLVMLVVAFEGSFLVQYISRYTQEIFSFLISLIFIYETFSKLIKIFQDY
                     PLQQTYAPVVMKPKPQGPVPNTALFSLVLMAGTFLLAMTLRKFKNSTYFPGKLRRVIG
                     DFGVPISILIMVLVDSFIKGTYTQKLSVPDGLKVSNSSARGWVIHPLGLYRLFPTWMM
                     FASVLPALLVFILIFLESQITTLIVSKPERKMIKGSGFHLDLLLVVGMGGVAALFGMP
                     WLSATTVRSVTHANALTVMGKASGPGAAAQIQEVKEQRISGLLVSVLVGLSILMEPIL
                     SRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPFVKRVKTWRMHLFTG
                     IQIICLAVLWVVKSTPASLALPFVLILTVPLRRLILPLIFRELELQCLDGDDAKVTFD
                     EENGLDEYDEVPMPV"
     exon            309..429
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            430..503
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            504..684
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            685..820
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            821..944
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            945..1026
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1208
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            1209..1419
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            1420..1632
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            1633..1781
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            1782..1976
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            1977..2147
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            2148..2237
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            2238..2404
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            2405..2658
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            2659..2828
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            2829..3002
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
     exon            3003..4550
                     /gene="Slc4a1"
                     /gene_synonym="Ae1; CD233; Empb3; l11Jus51"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgtttatgg ggcacccggt cggagcaggg caagggggtg gggtgggaag gggctcccgg
       61 ctgtgggacg ggcagattag gaggcagggc atgagtcagg ggtttgggag cctcccccag
      121 ggcacctgcc tgtgctgtta gagcagttgg gagctcagcc agtcacagag ggcaccagtg
      181 gcggcaggca ggacttcccg aaggaccccc gaggctcctg agcagggacc tgaggtgcag
      241 gttatgctgg cggcccagag agcagagaac gactggacac tgaggacggc atcatggggg
      301 acatgcggga ccacgaggaa gtgctggaga tcccagatcg agacagcgaa gaagaactgg
      361 agaacataat aggacagata gcatatagag acctaaccat ccctgtgacc gagatgcagg
      421 acccagaagc tcttcccaca gagcaaacag ccacagacta cgtccccagc agtacctcca
      481 caccgcaccc aagctccggt caggtctatg tggagcttca ggaactgatg atggaccaga
      541 ggaaccagga actacaatgg gtggaggcag cgcactggat agggctggag gaaaaccttc
      601 gagaggatgg tgtatggggt cgcccacatc tatcttacct gaccttctgg agccttctag
      661 aactgcagaa ggtcttctca aaaggcacct tccttctggg tctggcagag acatccctgg
      721 ctggggtggc caatcacctt ctagactgct tcatctacga ggatcagatt cggcctcagg
      781 accgagaaga actgctccgg gctctgctac tcaaacgcag ccatgctgag gacctaggga
      841 atctggaggg ggtgaagccc gccgtcctga cccgctctgg gggcgcctct gagcctctgc
      901 ttcctcacca gccatcgctg gagacccagc tgtactgcgg acaggcagag gggggctcag
      961 aaggaccctc aacatctggg actctgaaga tccccccaga ttcagaaacc acactggtgc
     1021 tagtgggccg ggctaatttt ctggagaagc ctgtactggg cttcgtgaga ctgaaggagg
     1081 ccgtgcctct ggaggacctg gtgttgccag agcctgtggg cttccttctt gttctgctgg
     1141 gacctgaggc tccgcatgtc gactataccc agctgggcag ggctgcagca actctcatga
     1201 cagaaagagt gttccgcatt accgcctcca tggcgcataa ccgagaggag ctgctgcgct
     1261 ctctggagag ctttctggac tgtagcctgg tgctgccgcc cacagacgcc ccttcagaaa
     1321 aagctctgct taacctggta ccggtgcaga aggagctgct taggaggcgg tacctgccca
     1381 gccccgccaa gccagacccc aacttgtaca acactctaga cttgaacggg ggaaaagggg
     1441 gccctggtga cgaagacgac cctctacggc gcacaggccg gatctttgga ggcctgatcc
     1501 gtgatatccg gcgccgttat ccttactacc tgagtgacat caccgatgcg ctcagtcccc
     1561 aggtgttggc tgctgtcatc ttcatctact ttgctgcctt gtcacctgcc gtcaccttcg
     1621 gcggcctcct gggagaaaag acccggaact tgatgggggt gtcggagctg ctcatctcca
     1681 cagcagtgca aggcattctc tttgctctcc tgggggcaca gcccctgctt gtgctaggct
     1741 tctcaggacc cctgctggtg tttgaagaag ccttcttctc gttctgtgaa agcaataacc
     1801 tggagtatat cgtgggccgc gcgtggatcg gcttctggct catcctgctc gtgatgttgg
     1861 tggtggcctt tgaaggcagc ttcctcgtcc aatacatctc ccgatacacc caggagatct
     1921 tctccttcct catctccctc atcttcatct atgagacttt ctccaagctg atcaagattt
     1981 tccaggacta cccactacaa cagacttatg cccctgttgt gatgaagccc aaacctcagg
     2041 gccctgtgcc caacacagcc ctcttctctc ttgtgctcat ggctggcacc ttcctacttg
     2101 ccatgacgct acgaaagttc aagaacagca cctacttccc tggcaagctg cgtagagtca
     2161 ttggggactt cggggtcccc atctccatcc tgataatggt cctggtggat tccttcatca
     2221 agggcaccta cacacagaaa ctctccgtgc ctgatggcct caaagtgtcc aactcctccg
     2281 cccggggctg ggtcatccac cctctggggc tgtatagact tttccccacg tggatgatgt
     2341 ttgcctccgt tctgcccgcc ctgcttgtct tcattctcat tttccttgag tctcagatca
     2401 ccacgctgat tgtcagtaaa ccagaacgga agatgatcaa gggctctggc ttccacctgg
     2461 acctgttgct ggtcgttggc atgggtgggg tggctgccct ctttgggatg ccttggctca
     2521 gtgccaccac tgtaagatct gttacccacg ccaatgccct cacagtcatg gggaaggcca
     2581 gtggtccagg ggctgcagcc cagatccaag aggtcaagga acagcggatc agtgggctcc
     2641 tggtctctgt gcttgtggga ctgtccatcc tcatggaacc tatcctgtcc cgcatccccc
     2701 tggctgtgct cttcggcatc ttcctgtaca tgggagtcac atccctcagt ggcatccagc
     2761 tctttgaccg catcttgctc ctgttcaagc cacccaagta ccacccggat gtgccctttg
     2821 tcaagagggt gaagacctgg cgcatgcacc tcttcacggg catccagatc atctgcctgg
     2881 ctgtgctgtg ggtggtgaag tccactcctg cctcgctggc cttgcccttc gtcctcatcc
     2941 tcacagtgcc tctccgtcgt ctcatcctcc cgctcatctt cagagagctg gaactccagt
     3001 gtctggacgg tgatgatgcc aaagtgacct ttgacgagga gaatggcctg gatgaatatg
     3061 acgaagtgcc catgcctgtg tgagcggcag gcccaggccc caaccactcc actttcccac
     3121 cctcccagga agaccactca tgggcgtgtt atggctgtgg gtggggaagg aggggtgttc
     3181 taggaaaccc tctatctaag gtacactgga ttttctggct ggagacgacc ggaagctata
     3241 tcagggaatt ggggtcacag tctcttgcaa ctgtatgggc cccaggctgg aaaagttaga
     3301 tctgtgtctc ttctcttcat ggcatagtta taaatagcaa aggggagaga cggaggacac
     3361 ttttcatgtt cctgctggct gtgtggcctt aggtaagtcc cttgacctct ctggcctctg
     3421 cttcctactc tataaaatgt atgcattggt aagagtacct atgttaccat atggcagctg
     3481 aggaccaaga gcaaatgtcc aagaaccatt acagccttca ttgttcacca agcctgccca
     3541 gatcacacag cccctggggc cacacagcgc gtacctgagc ctcctgacct ggaggccaca
     3601 cctctgtcct ccatcttccc acccacatgc ctgccctgta cagaaatacc cctaatgact
     3661 tcctcccatt ttctgtccca gccccacccc aagactccct tctctgcatc cagagaggcg
     3721 tcctggtgag aataagggac tggggctcag actcctaggt acttactctc tcccactaag
     3781 tattcattca tttgttcatt cattcattca ttcacttatt cattcattca ttcatacact
     3841 ccatagccac ctactaaagg ccctagacct agtagacaca gagtgaactg gttcaagttc
     3901 ctctgggtga ggccaatacc taagcctgct ctggatgtgg gtggggatag agggagggtg
     3961 agagggttgt aatttattaa ctgtgtattt tctaagtgct ccttctgagc ctcagttctg
     4021 cccccatgag aaacctgctg tgtccaaccc cagctaagct gaatcttggg gggaacccaa
     4081 gctttgaccc attggagtag gagacagtgg cttgctcaaa atatggataa acatctattt
     4141 tttttttaca aaaagataat atttttaaaa aaagttgaaa gaactagaac ttgtgagaga
     4201 aacagaaaat ccgagtgagc aggcagcagg aggcttgcag tgggagattc tcgggggatt
     4261 tgaaagcaca tgcctgccct cctggcacat caccacagaa cgcttgtttc cacgttctag
     4321 aaatgagggc agggatgtac ctaccttgta gggagctggg aggattgacc cacaaggtct
     4381 aagaaaagcg tttgccatgt tttgggcaca ccccatcctc tcctgccttg cctgctcctt
     4441 gaacattacc aaagagaatg gggatcgtgc cgcccactct gccaacgctc ttcccccacc
     4501 gccgtgcttg ggaataggtt ttgccaataa acgtgtctgt gttaaagggg aaaaaaaaaa
     4561 aaaaaaaaaa aaaaaaaaaa aaaa
//
