LOCUS       NM_001033219            7509 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus solute carrier family 45, member 4 (Slc45a4),
            transcript variant 1, mRNA.
ACCESSION   NM_001033219 XM_128267 XM_888768 XM_898237 XM_898244 XM_898248
            XM_898255 XM_898268 XM_907823 XM_920555 XM_920562 XM_920569
            XM_920578 XM_920594
VERSION     NM_001033219.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 7509)
  AUTHORS   Suenkel,C., Cavalli,D., Massalini,S., Calegari,F. and Rajewsky,N.
  TITLE     A Highly Conserved Circular RNA Is Required to Keep Neural Cells in
            a Progenitor State in the Mammalian Brain
  JOURNAL   Cell Rep 30 (7), 2170-2179 (2020)
   PUBMED   32075758
REFERENCE   2  (bases 1 to 7509)
  AUTHORS   Alvarez-Dominguez,J.R., Zhang,X. and Hu,W.
  TITLE     Widespread and dynamic translational control of red blood cell
            development
  JOURNAL   Blood 129 (5), 619-629 (2017)
   PUBMED   27899360
REFERENCE   3  (bases 1 to 7509)
  AUTHORS   Bartolke,R., Heinisch,J.J., Wieczorek,H. and Vitavska,O.
  TITLE     Proton-associated sucrose transport of mammalian solute carrier
            family 45: an analysis in Saccharomyces cerevisiae
  JOURNAL   Biochem J 464 (2), 193-201 (2014)
   PUBMED   25164149
  REMARK    GeneRIF: mRNA expression of SLC45A2 in eyes and skin and of SLC45A3
            primarily in the prostate, but also in other tissues, whereas
            SLC45A4 showed a predominantly ubiquitous expression
REFERENCE   4  (bases 1 to 7509)
  AUTHORS   Alvarez-Dominguez,J.R., Hu,W., Yuan,B., Shi,J., Park,S.S.,
            Gromatzky,A.A., van Oudenaarden,A. and Lodish,H.F.
  TITLE     Global discovery of erythroid long noncoding RNAs reveals novel
            regulators of red cell maturation
  JOURNAL   Blood 123 (4), 570-581 (2014)
   PUBMED   24200680
REFERENCE   5  (bases 1 to 7509)
  AUTHORS   Shalom-Barak,T., Zhang,X., Chu,T., Timothy Schaiff,W., Reddy,J.K.,
            Xu,J., Sadovsky,Y. and Barak,Y.
  TITLE     Placental PPARgamma regulates spatiotemporally diverse genes and a
            unique metabolic network
  JOURNAL   Dev Biol 372 (1), 143-155 (2012)
   PUBMED   22967998
REFERENCE   6  (bases 1 to 7509)
  AUTHORS   Okazaki,N., F-Kikuno,R., Ohara,R., Inamoto,S., Koseki,H.,
            Hiraoka,S., Saga,Y., Seino,S., Nishimura,M., Kaisho,T., Hoshino,K.,
            Kitamura,H., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
REFERENCE   7  (bases 1 to 7509)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC119914.10.
            
            On Nov 4, 2017 this sequence version replaced NM_001033219.3.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK133269.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-419               AC119914.10        98197-98615
            420-1054            AC119914.10        116865-117499
            1055-1243           AC119914.10        133367-133555
            1244-1423           AC119914.10        135217-135396
            1424-2490           AC119914.10        135856-136922
            2491-2590           AC119914.10        137554-137653
            2591-2802           AC119914.10        138392-138603
            2803-7509           AC119914.10        140811-145517
FEATURES             Location/Qualifiers
     source          1..7509
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 34.02 cM"
     gene            1..7509
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /note="solute carrier family 45, member 4"
                     /db_xref="GeneID:106068"
                     /db_xref="MGI:MGI:2146236"
     exon            1..419
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            420..1054
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             811..3168
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="solute carrier family 45 member 4 isoform 1"
                     /protein_id="NP_001028391.2"
                     /db_xref="CCDS:CCDS27517.1"
                     /db_xref="GeneID:106068"
                     /db_xref="MGI:MGI:2146236"
                     /translation="MKMAPQNADSESMQVQELPVPLPDPQKPRDPEAETQEETTSEGS
                     IDRIPTRLWVMHGAVMFGREFCYAMETALVTPILLQIGLPEKYYSLTWFLSPVLGLIF
                     TPLIGSASDRCTLSWGRRRPFILALCVGVLIGVALFLNGSAIGLALGDVPSRQPIGIV
                     LTVLGVVVLDFSADATEGPIRAYLLDVVDSEEQDMALNIHAFSAGLGGAIGYVLGGLD
                     WTQTFLGDWFQTQNQVLFFFAAVIFSVSVALHLFSIEEEQYSPQQDRGPEDPTLPGTS
                     VQPGAPAPASRLSSLGGGMQDGSPPFPDEVQSEHELSLDYLDVDIVRSKSDSVLHMAD
                     ATLDMEPQLLFLHDIEPSIFQDASYPSTPQSTSQELLRAKLPRLSTFLRESTKEDDTL
                     LDNHLNEAKVPNGRGSPPINSLSRSKVDLKPSVTSGSMRRRRHMFHRQASSTFSYYGK
                     IGSHCYRYRRANAVVLIKPSRSMSDLYDLQQRQRSRHRNQSGATASSGDTESEEGETE
                     TTVRLLWLSMLKMPKELMWLCLCHLLTWFSVIAEAVFYTDFMGQVIFKGNPQAPSNST
                     KWHAYNAGVKMGCWGLVIYAATGAICSALLQKYLDNYDLSIRIIYMLGTLGFSVGTAV
                     MAMFPNVYVAMVTISTMGVVSMSISYCPYALLGHYHDIKEYVHHSPGNSKRGFGIDCA
                     ILSCQVYISQILVASALGGVVDAVNSIVVIPIVASVGSFLGFLTATFLVIYPEVSEEP
                     KEEQKGLSSGPAGEGEGGAGSEKPTVLKLSRKGGLRGLVETESMV"
     exon            1055..1243
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1244..1423
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1424..2490
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2491..2590
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2591..2802
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2803..7509
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4612..4617
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /note="hexamer: AATAAA"
     polyA_site      4647
                     /gene="Slc45a4"
                     /gene_synonym="9330175B01Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtgtgtagt ggacacctta gccaactgtg tattcagcta cagaagatcc actggatctc
       61 tgtcctttac ctctgccctt gctgatgatc tgtcccaact cctggaggcc atgtctggaa
      121 tagaaaccat gggatgggag cccgctccct ggccctggga atgtggaggt gcactgcgaa
      181 cccttgctga agcttgtcat ttggccttta gagggttttt ggtgagaaga ctgaaaattt
      241 aatgctttaa atgtcctggc tgagaagagc agacacttgg ggcagctgca gagattgttc
      301 cttgaccaca gcctgtttag ctgtgttccc tgccttagga gtgagtcccg tgctgtatgt
      361 gctgcagttt ccttgtgtct tctgttggcc tgtgcgcctg agcactgctt atataacaga
      421 tcgtctagcc gctcgatggg gagtcacaga agaccgcctg tgtgtgtcag atccccacct
      481 ctctgtagca agagaagtaa ctacagcgcc ttcacagtca tgatgatgaa actggtatta
      541 actgagtggc ccttatggat ttttaactct aactcacagt gagccagcaa gccatatgtt
      601 tacagttcaa ccaaaaaccc ttcgtgttgc tgcacttctt gtgagaggtt gagacgcctg
      661 ttggtacaga gtggaataca agagttactt gccgtggaac gcacctgcag cagagcgaga
      721 agacgtctta atttatcatt ggagagagat gatagtatta tttatatagg tagaataaat
      781 atatatataa atatatatat tttggtggta atgaaaatgg ctccgcagaa tgccgactcg
      841 gaatctatgc aagtacaaga gctgcctgtg cccctgccag accctcagaa acccagagac
      901 ccagaggcgg agacccaaga ggagaccaca agcgaggggt ccatagacag aatccccaca
      961 cgcctatggg tcatgcatgg ggcagtgatg tttggcaggg aattttgtta cgcgatggag
     1021 acagcactgg ttacacctat actgttacag ataggcctcc ctgagaagta ctacagcctg
     1081 acctggttcc tgagccccgt cctcggcctc atcttcacac cgcttattgg ctctgcaagt
     1141 gaccgctgca ccctgagctg gggccgccgg cggcccttca tccttgcgct gtgtgtgggg
     1201 gtcctcattg gtgttgcact tttcctcaac ggctccgcca taggtctggc gctcggtgat
     1261 gttcccagcc ggcagcccat tggcattgtc ctcacggtgc tgggagtggt ggtcctggat
     1321 ttcagtgccg atgcaactga agggcccatt cgtgcctacc tgctggatgt ggtagacagt
     1381 gaggagcaag acatggccct caacatacac gccttctctg ctggccttgg tggggccatt
     1441 ggctacgtgc tgggtgggct ggactggacg cagaccttcc taggtgactg gttccagacg
     1501 cagaaccagg tgctgttctt cttcgctgcc gtcatcttct ccgtgtcggt ggctctgcat
     1561 ctcttcagca tcgaggagga gcagtacagc ccacagcagg accgcgggcc tgaggatccc
     1621 accctgcccg gcaccagcgt tcagcctggc gccccagccc ctgcctcccg cctcagctcc
     1681 cttggtgggg gcatgcagga cggcagcccc ccattcccag atgaggtaca gtcagagcac
     1741 gagctgtcct tggactacct cgatgtggac atcgtgcgca gcaagagtga ctcggtgctg
     1801 cacatggccg acgccacact ggacatggag ccccagctgc tcttcctgca tgacatcgaa
     1861 ccctccatct tccaagacgc ttcctacccc agcacccccc agagcaccag ccaagagctt
     1921 ctgagggcca agctgccccg cctgtccacg ttcctcaggg agtccaccaa ggaggacgac
     1981 accttgcttg ataatcactt gaatgaagct aaagtcccaa atgggagagg ctccccacca
     2041 atcaactccc tcagccgctc caaggtagac ttgaagccct cagtcacatc tggttccatg
     2101 aggcggcgta ggcacatgtt tcacaggcag gcttctagca ccttctccta ctacggcaag
     2161 attggatccc actgctaccg ataccgccgg gccaacgcag tggtcctcat caagccgtcc
     2221 cgaagcatga gcgacctgta tgacctgcag cagcggcagc gctcccggca ccgcaaccag
     2281 agtggggcca ctgcctccag cggggacacg gagagtgagg agggtgagac agagaccacc
     2341 gtgcgcctgc tgtggctgtc catgctgaag atgcccaagg agctgatgtg gctctgcctc
     2401 tgtcacctac tcacttggtt ctccgtcatc gcagaggctg tcttctatac tgacttcatg
     2461 ggccaggtta tcttcaaagg gaacccgcag gccccctcca actccaccaa gtggcatgcc
     2521 tacaatgctg gcgtgaagat gggctgctgg ggcctggtca tctacgctgc tactggtgct
     2581 atctgctcag ccttgctaca gaagtacctg gacaactatg acctgagcat caggatcatc
     2641 tacatgttgg ggacactggg cttctccgtg ggcaccgctg tgatggccat gtttcccaac
     2701 gtctacgtgg ccatggtcac catcagcacc atgggtgttg tctcgatgag catctcctac
     2761 tgcccctatg ccctcctagg gcactaccat gacatcaagg agtatgtcca ccacagtccg
     2821 gggaattcca agcgtggatt tggcattgac tgcgccatcc tctcctgtca ggtctacatc
     2881 tcccagatcc tggttgcatc tgcccttggg ggcgtggtcg acgctgtgaa tagtatcgtt
     2941 gtcatcccca tagtggcctc tgtaggctct ttcctgggct tcttgacagc cacattcctg
     3001 gtcatctacc ctgaggtgtc agaggaacct aaggaggaac agaaaggcct gtcctcaggg
     3061 cccgctggcg aaggcgaggg tggagcgggc agtgagaagc ccactgtact gaagctgtct
     3121 cggaaagggg gccttcgggg gctggtggag acggagtcca tggtgtgagc ccccgctggt
     3181 acattccaca ctggagggca gggcgcactg ggggctaggc ttgcccatac catgcgagct
     3241 ggagttcctt cccagagcac agtccaagtt cagtaggtgt taggtgtagg gtaggtttga
     3301 gctattagac aaaaatatca cactaattta cctttcccac gattaaaaaa aaatcatttg
     3361 aaatcttttt ttattgaaaa agaacttaat ttcagctgtc ttttattctg caggtatatc
     3421 attctgcatg ttttaaattg tgaaatattc acagcatagt caataagcaa tttagaaaac
     3481 ataagggtct gcatttctaa accagtaatt ggaagtgcag aaactgactc ccttggcaga
     3541 tatcatctga aggcagcaga cagcagcgta gtttccagat tgcccagcag gtgtctgttg
     3601 gagacacctt cagcatcagt ctggtattgc agcgcctcag agtatttttc tgtttatttt
     3661 agaaacagta ttttcttttt cacaactgtg gttttcttag aagaacatca tctctggcga
     3721 gttaggctcg caatcctgtg cacagctgag accacacacc aaagctgggg aaaggtccca
     3781 gaggtgtttg agcagaaggc agccattccc cagggcagcc tccagacatc ccacccaggg
     3841 acagcaccaa ccagtagggc tgaatgtgaa ctctcagtgt gcctcctgcg tgcttgtgtg
     3901 caagtttgtc tgtccagtcc ctaccctcgt gctcttcccc agaagccacc acagggcagt
     3961 tgttggctcc gtgggacact tcagcttgtc tctacacgtt tggctggaaa tcaggcacag
     4021 agctcctcca ggtgagcatc ggctcccgag tcctgctgca cggctacctc gagagtggga
     4081 gacagtggca tcagagcagg gcgcgggaag gggccgagcc tacctcctac cacattgctg
     4141 acattgatcc tcgctggaac ctaactgaag tcttgcaagc tcatcacctg cttctgctga
     4201 tggtcactgg agtgggatga aggcaaagaa cagcaagcat ccgcctgagc aggctgctga
     4261 cccaagatcc tgcctgagca ggcgggctgc tgacccaaga tccgtgcagt gtccgctttc
     4321 tgcacacgag cagaacttgg gcttcaggga agcaggctca gcaagtgcgg ctgtgggtaa
     4381 agactttcca acgacgtctc tgtttaacaa ctccagtctc tcggtctgca ctcaggagag
     4441 ggagaacctc cctggatggt acccagatga agtcagagcc gtgctcttgt tgcctcggtt
     4501 ggtgttttta cataaagtac tttaaagtgc atgagaatca tgctgcaata tgagcattct
     4561 aaagcaaata tatatacata tatatttcaa gatgaaagta agcagttttt aaataaatta
     4621 cttgaatttt ctgtgtcttc aaaggaacgc tgtgtttatg tccttggcct gggctctctt
     4681 gccacattcc ccacacaggt ggcactttgt cgtctttagt gttttatatc tgggaagcag
     4741 aggcaagctc aggatacaag ggtaccttcc ccttgcctgg gtcttccctc gagcctatgc
     4801 ctgcagagaa ctgtctccac cttccagtgt tttctgtgtt ccccgttgag aatggaattg
     4861 caggtctctt tcttgggtag gggaagttgg actcccaaac acagtcccag tgctaagccc
     4921 ccagccagct cagccccatc agcggggtgc tctgtctctt tggggaagca ggcacttctg
     4981 ggctcctccc tccaaccagc atccttagca ggtcactctt gtgcaacata gttttaagat
     5041 ggtattccct cattcctgaa acaaaggact acagcctctt gtttttaggc accctgcttt
     5101 tccacgttgc cataggagga cagagggagg caaggacgca taggacactt aagtggggaa
     5161 aacctggaac catcaaaatg agtgtgaggt cctagtcaca cgctgctcac aacaccccac
     5221 ccaaaggctt ctgcagacct tccccactga agctgaataa ctgacagggg ggttggggtc
     5281 tagcagagac cacacccata ggagcaagag ataataggat cgccccaaac agtggtccag
     5341 accttaaaat gccatggctt ccacttacca taatctgaag taccacaagg acagtgttta
     5401 tggcacaggt cttggcaaag ccaccagtaa aatgctgaca accagtaaga acagtgagcc
     5461 agaggcatgc ctgtttgttg ctgtcagatc aggctgcaca tctggtactt tttaagacct
     5521 gagcctgtta gatgtttgca tccaaaggcc tctgtctgtg ggtctggcca gtgtgagggc
     5581 ccttgggttg agacccaagg gtgataatag agttgatttc tgggcttcct tgcagataaa
     5641 tatagtgaac catgggcctt gaggtggatg ttgtctcatc cagggtacac aagtagccag
     5701 gcccttttgc ctagcccttc cctcactgag atgccaccaa tggacaacta tcagggccac
     5761 tgcttctgtg ttaaagaagc caagggagga gggctggctt tgcagtgggt gatgccaaag
     5821 cttgtattgc tcagaccaga ccaggtactt ctgtttcctg acttggactt gcagacccag
     5881 cactcacggg cactgggatc catcccagag agtgcacctg agtagctctt ccgtggccta
     5941 tgatctcgag aggaaaggtg gttgggttcc gtggacccag gggactggaa gggtcaagca
     6001 gatgcccatt tgtggccagt gctgaggatg caaacggagg agttagcttt gtaatacctt
     6061 gggatttagc cgtgaaaagc acctgtgtgg taggggatta gcaggaattc cactggtccc
     6121 aggccacaga attgcacgca ggttactaac ggaagggagc ccgcttctct ttcccgtgaa
     6181 agtcaaaaca ttttttaaag tttgcctgca agagagtaca agccgttaag tggtccacag
     6241 cctgggggca gaatggcatg gtggcacttc ctggtatctg gaaagctagc tatgagacat
     6301 tatctgttct tagcctgagg tctcagctgg aatattcaca ccgacaggtg cacagccctc
     6361 agactcccat ccttgagatc ctcagggccc tgtgagggac ggtttggaca aagttgggag
     6421 tgacagagca ggatctggat agtagcctcc tggagtggcc cagatgtcat agaaggtgtg
     6481 gtgacccctc ccatcagctg cagcctggct gccttatctc cctggtacca ctggcttctg
     6541 caacccatgg ggttaatggc ttcctttgtc tgtggccggt ggtctgtgcg ggagcagcaa
     6601 ccatggctat gtgtgctaca ggtcagtatc ctaaaacatc tactgaaacc ggacgctcat
     6661 caacctcaca tgcaccaaac gccatggccc cctagctgtg ccacttcccc ctgaacctct
     6721 gccttcagcc accaaccaac acctggattg tgccggtgaa gccaccggtg ggtcctcctc
     6781 caatggctgt caccagaaac aggcttaccc ctctgcatgt gagctttcga gagtgcctgg
     6841 ggactgccca gcaaggcagc catgctgtct gctggactga cttaaaacag ggcaggcagg
     6901 gggcgtgcac atccatatct catcaccact tcatgaaaag ccagcatcat ggtgggaagc
     6961 ctgagatagc ccctctgaca gcaacccttg ggcctccagg agcacagagc agcctgggcg
     7021 tcccagctgc ctccctgctg cctcctgaag gtcttgtgct gggacccagt agcaggaaga
     7081 acagttgtta gaaaggcctc ggcacaatgg cactccccag gcacctcgga acaaaaaaaa
     7141 cgatttagtt cctttgtgaa ctggaaacag gacaactgtt atcaacttat taagttggag
     7201 cactgtaata gctcttgctg atttttagca acagttaagt gtgtgttaaa cacatgttac
     7261 gatttatgaa gaaacagatt ctagagagag tactatcaca cacgacgact ttgtttttta
     7321 ctaggtggat attgatgtct gctgctgtcc agagcccctc tagggctttg tcctttcttt
     7381 gtcacatgct gggctactgg tccctgtaca tcgctcggtg tgtatggcct gactccttcc
     7441 tgccaggcta gtgtctccct gccgctattg ctgttacact gtggttaatt caataaatgt
     7501 taccattgc
//
