LOCUS       NM_001081263            4098 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 44, member 5 (Slc44a5), mRNA.
ACCESSION   NM_001081263 NM_001001736 XM_143556 XM_619974
VERSION     NM_001081263.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4098)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4098)
  AUTHORS   Catela,C., Chen,Y., Weng,Y., Wen,K. and Kratsios,P.
  TITLE     Control of spinal motor neuron terminal differentiation through
            sustained Hoxc8 gene activity
  JOURNAL   Elife 11, e70766 (2022)
   PUBMED   35315772
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4098)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4098)
  AUTHORS   Alvarez-Dominguez,J.R., Zhang,X. and Hu,W.
  TITLE     Widespread and dynamic translational control of red blood cell
            development
  JOURNAL   Blood 129 (5), 619-629 (2017)
   PUBMED   27899360
REFERENCE   5  (bases 1 to 4098)
  AUTHORS   Alvarez-Dominguez,J.R., Hu,W., Yuan,B., Shi,J., Park,S.S.,
            Gromatzky,A.A., van Oudenaarden,A. and Lodish,H.F.
  TITLE     Global discovery of erythroid long noncoding RNAs reveals novel
            regulators of red cell maturation
  JOURNAL   Blood 123 (4), 570-581 (2014)
   PUBMED   24200680
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC087184.7 and
            AC119163.23.
            
            On or before Mar 24, 2007 this sequence version replaced
            XM_619974.3, NM_001001736.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086641.1, SRR10662774.446117.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-362               AC087184.7         159631-159992
            363-412             AC119163.23        162638-162687       c
            413-486             AC119163.23        129124-129197       c
            487-571             AC119163.23        111411-111495       c
            572-656             AC119163.23        100118-100202       c
            657-782             AC119163.23        95055-95180         c
            783-843             AC119163.23        93910-93970         c
            844-967             AC119163.23        91021-91144         c
            968-1051            AC119163.23        90642-90725         c
            1052-1164           AC119163.23        86438-86550         c
            1165-1296           AC119163.23        83176-83307         c
            1297-1396           AC119163.23        80515-80614         c
            1397-1489           AC119163.23        77664-77756         c
            1490-1577           AC119163.23        76420-76507         c
            1578-1840           AC119163.23        75746-76008         c
            1841-1935           AC119163.23        75185-75279         c
            1936-2039           AC119163.23        72867-72970         c
            2040-2113           AC119163.23        71298-71371         c
            2114-2184           AC119163.23        70193-70263         c
            2185-2273           AC119163.23        69984-70072         c
            2274-2358           AC119163.23        68712-68796         c
            2359-4098           AC119163.23        62533-64272         c
FEATURES             Location/Qualifiers
     source          1..4098
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 78.82 cM"
     gene            1..4098
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="solute carrier family 44, member 5"
                     /db_xref="GeneID:242259"
                     /db_xref="MGI:MGI:3035141"
     exon            1..363
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            364..412
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            413..486
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            487..571
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            572..656
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            657..782
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            783..843
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            844..967
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            968..1051
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1164
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..1296
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1297..1396
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1397..1489
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1490..1577
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1578..1840
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1841..1935
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            1936..2039
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            2040..2113
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            2114..2184
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            2185..2273
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            2274..2358
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     exon            2359..4098
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2646..2651
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="hexamer: ATTACA"
     polyA_site      2670
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="major polyA site"
     regulatory      3095..3100
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="hexamer: ATTAAA"
     polyA_site      3115
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="major polyA site"
     regulatory      4069..4074
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="hexamer: AATAAA"
     polyA_site      4098
                     /gene="Slc44a5"
                     /gene_synonym="Gm422"
                     /note="major polyA site"
ORIGIN      
        1 ggcgggcgcg cgatcgaggg aggtgggcgc tgggttggcg ctccggggac ccggcgctgc
       61 gcctccagta gaggcgccgc acagcagagg gggccgccgt ggccgccgca gagcgtgcgg
      121 gggctcggtc tggcggcggg cagctgaggg gcgactgcgc ccgcgcagca gagccgagtg
      181 gagtggagcg cgcaacctga ccgccgccgc ctggcatatg ccatcaccgc cacaaagagc
      241 tcgctgagct caggcgacgg agctcccggg gctgcgcggc acaggaggct ctgcgcggcg
      301 gacccggggg ggaagggacc agactgagga tggcccggaa gagaaagccc cccagcagcc
      361 agggtgaccc aaggaggtat gacccagatt tccagggacc tactgccaaa aggacttgta
      421 cggacgtttt atgctgtctg atcttcctac tgtttatttt gggctacgtt ctgttaggac
      481 tcttggcttg ggcccatggt gaccccagga aaatggccta tcctacggac agccagggac
      541 atttttgtgg ccagaaggga acccccaatg agaacaagac agttttgttt tactttaaca
      601 tctttagatg taccagtcct tctatgatgc tccggctaca gtgctctacc acacagatct
      661 gtgtctccag gtgcccagag agattcctca cctacttgga tatgcaattt ttgaacaaag
      721 aagacaaaaa ctactgggaa tactatcgcc aattctgcaa ggccaaggcc aagcctgtgg
      781 agactctcag agatcttctg atcagtggtg actgtccctt agctgtgtac ccaagcagac
      841 cttttctgca gagatgtata cctgaccttt cagccctcaa tggtacctgg acgccaggaa
      901 gtaggatgaa gtttgaagat ggaagtgggc agaccaggac tatgctagaa ttcagggagg
      961 ctgcgaacgg cattagtgat ctgatcaatg ccaggacgat tggattgaag ctgcttgaag
     1021 actatgctac ctcgtggaag tggattctca tcggcctgac tgttgccatg gcactgagtt
     1081 ggactttttt aatactcctg aggttcacag ctgggttcct cttctggttc ttcatatttg
     1141 gtgtgctcgg aattatagga tacggaatat ggtactgttt tctggagtac agcagcattc
     1201 agcagaggcc acagtcaacg ttctggatgt atggcttcgg gattcagagg agagtaaaca
     1261 tgttctttca cttgaaggag acctggtttt caatgatgat catcttgtct gccattgaaa
     1321 tcatcatcat catcgtcctg atcttcctca ggactcggat ccaagtggcc atcatcctgc
     1381 tgcaggaagg aagcaaagcc attagctacc ttcccagtgc gttaatctac ccagttttaa
     1441 ccttcatctt gctatcaatc tgcatttcct actgggctgt gacagccgtt ttcttggcta
     1501 catcaggggt accaatattc aaagttatgg tcccagcggg gcaatgtata tatgaagatg
     1561 aaacttgtga cccagagatt tttccttata ctaacattcc caaagactgc cccggtgcat
     1621 cgtgcaactt tgctttctat ggcggaagga gcatgtacca caattacatc ctgaccttcc
     1681 aggtctacaa cctctttgcc ttcctttggc ttataaactt tgtcattgcg ttgggtcagt
     1741 gtgccctggc tggtgccttt gcttcctatt actgggccat gaaaaaaccc gacgacatcc
     1801 cgccataccc actcttcact gcgtttgggc gagcagtacg ataccacacg gggtctctgg
     1861 cctttggatc tttgatcctt gcatccgttc agatgtttaa agtgatcgta gaatacctgg
     1921 acaggagact caaaaaggct cagaacagtg ctgctcagtt cctgcactgc tgcctacagt
     1981 gctgtttctg gtgtttggaa aagatggtga agtttttaaa cagaaatgcc tacatcatga
     2041 ttgcattata tggcaaaaac ttctgtgagt caacaagaga tgctttctat ctgctcatga
     2101 gaaacattct gaaagtcaca gttacagatg aagtcacgta ctttgtatta ctcctgggaa
     2161 aagtcctggt ttctgggatt gtaggtgtct tggccttcct actcttcaca gaaagactac
     2221 aaataattgt agatggacca acgactttaa attactactg ggtccccttc ctgactcttg
     2281 tgtttggatc ttacatgatt gctcacggat tcttcagcgt ctattcaatg tgtgttgaaa
     2341 ccattttcat ctgcttcttg gaagacctag aaagaaacga aggctctcct tcaagaccct
     2401 atttcgtgac tccggctcta atgaacattt tgctggagca gggcaagatc aagaagcagt
     2461 aggagagcca gctggatatc ctgctgcctg tgtcgcctcc cacactgtat ccgtccaaca
     2521 caccttcccg tagtgctttg gttggggacg ttcgtatccc cgccttgctg gcttgctttt
     2581 gcatcttata ccaaagcccc acactgtagc ctgtgaagcc atcagaagtc acaaggggat
     2641 tgttaattac atgcaacatt tttatactaa gatctttcgt tttgtaattt attattatta
     2701 ttattattat tattattatt attatcattt ttacagagag tgacttggat gttttgaaaa
     2761 aaatattgaa tacattcata atctttttaa tagtaactcc atgaaggata catgatctaa
     2821 attgatagct cctagtgtat ttttaaagac gacaactaaa agacttctgt agggaaaatt
     2881 ggtaattaaa gcaagataaa tgttttttaa ggcccttccc cgcctcctgt ttgacagtca
     2941 acgggttaag cggaccaccc gctttggtct ttgcatcctg tgagagctgc cagtcagtcc
     3001 ttcagccctt accactcaat tctctcagtg ccttcctggc tggtcagtac ttcccggatc
     3061 ttgtgagcaa gtggacagac ctcgtttgaa agaaattaaa ctttaaaccc tgcaatgctg
     3121 agtgatgaca agtctcatgc ttcttttgtt ttgttatttt tgttttgttt ttgatgtttt
     3181 gtttggcttt gttttgtttt gtcttgctca ctgactggac tccactagcc atgacactac
     3241 ctttgatatc ctcctcatca aaggagtaca ctgtgtgata caaacaattc cccttgtgcc
     3301 tagtggatat tcacaaatgg gtgccacacg caacacgcaa cacgcaaagc agcctgaacg
     3361 aacatgtgtt ggatttgtct ttgtttttac taaaagaagt tttaaagtat aatcttttct
     3421 atagcggttc ctttgaaata tgggtcggca tgcacacgtc tggtgtctca cccatacctg
     3481 aaggggaagc ctgtgggagt ttcacagggc aactttccct ctgaggggaa gctgtgtgct
     3541 gggctggaaa gccccattac ctgtggctct tctatcctgt tatggattgt cagttccact
     3601 aacttttata cgaaacaacc tgtttacctg tcagtttttt attgtgccaa tagaaactgg
     3661 aacggttttt aattcagttt tgaataattt tatgaggatt gctaagtttt aggagaactt
     3721 gactcagttc accaactcag caagtcaccc gagaagggga tcagtgagag tcaatcaaca
     3781 atacctactg ttgtttattg atggtttgtt gaaaactcac tttagatacc tttataccaa
     3841 aaagctccca ctggcgcctt gcagtgtggg ctcaccaccc cctaccccca ccccacgcca
     3901 cgcctggtgg tttgggctct gctgagccca tggtggtgtg ggttgtgtag ttagtgtgtc
     3961 tctgctatgc aggaacactg aaagcatagg gtctaaatac ctttgataga taaaatggtt
     4021 gatatttaat aaaatttgtt ggtacttatt gtatatttgg cttcttctaa taaagatttc
     4081 cataagagac aaataaaa
//
