LOCUS       XM_017318078            6811 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus solute carrier family 3 (activators of
            dibasic and neutral amino acid transport), member 2 (Slc3a2),
            transcript variant X1, mRNA.
ACCESSION   XM_017318078
VERSION     XM_017318078.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000085.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017318078.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6811
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="19"
     gene            1..6811
                     /gene="Slc3a2"
                     /gene_synonym="4F2; 4F2HC; Cd98; Ly-10; Ly-m10; Ly10;
                     Mdu1; Mgp-2hc; NACAE"
                     /note="solute carrier family 3 (activators of dibasic and
                     neutral amino acid transport), member 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 33 mRNAs, 47 ESTs, 2822 long SRA reads, 11 Proteins,
                     and 94% coverage of the annotated genomic feature by
                     RNAseq alignments, including 21 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:17254"
                     /db_xref="MGI:MGI:96955"
     CDS             5075..6655
                     /gene="Slc3a2"
                     /gene_synonym="4F2; 4F2HC; Cd98; Ly-10; Ly-m10; Ly10;
                     Mdu1; Mgp-2hc; NACAE"
                     /codon_start=1
                     /product="amino acid transporter heavy chain SLC3A2
                     isoform X1"
                     /protein_id="XP_017173567.1"
                     /db_xref="GeneID:17254"
                     /db_xref="MGI:MGI:96955"
                     /translation="MSQDTEVDMKDVELNELEPEKQPMNAADGAAAGEKNGLVKIKVA
                     EDETEAGVKFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPR
                     CRELPVQRWWHKGALYRIGDLQAFVGRDAGGIAGLKSHLEYLSTLKVKGLVLGPIHKN
                     QKDEINETDLKQINPTLGSQEDFKDLLQSAKKKSIHIILDLTPNYQGQNAWFLPAQAD
                     IVATKMKEALSSWLQDGVDGFQFRDVGKLMNAPLYLAEWQNITKNLSEDRLLIAGTES
                     SDLQQIVNILESTSDLLLTSSYLSNSTFTGERTESLVTRFLNATGSQWCSWSVSQAGL
                     LADFIPDHLLRLYQLLLFTLPGTPVFSYGDELGLQGALPGQPAKAPLMPWNESSIFHI
                     PRPVSLNMTVKGQNEDPGSLLTQFRRLSDLRGKERSLLHGDFHALSSSPDLFSYIRHW
                     DQNERYLVVLNFRDSGRSARLGASNLPAGISLPASAKLLLSTDSARQSREEDTSLKLE
                     NLSLNPYEGLLLQFPFVA"
ORIGIN      
        1 ccatctctcc agccctctat ttcttttttt aaacagatca ttactgcaat tatttattct
       61 gtgtgtgagc ccacatatgc aggtatgcct cagtgcacat gtagagggca gagggcaatt
      121 ttcaggagtt gtttctctcc tactatgggt cccagagaca gtacacagtt catcacaaca
      181 tcacaaccaa gtgagttcca gggactgacc gacaggcttg aaagcaagca ccttaaattg
      241 ctgagcagtc tcaccagttc cctccctccc tgagcctgac ccaccactct ctccagccac
      301 aaatgcttga gatttgatct tatgcaggtg aaccatctcc ccactgtcta agaggatata
      361 agacacaaat agaatgcaat atgtaattac taatttagta cttcagatgc tcagacgatc
      421 gggagataga tgatgctaga tatataggca catacacgct aggtggtgct ctaccactaa
      481 gcagatataa acactttgtt tttgagagct tgggctggct ttgagcgctt atgtttgagc
      541 tcttgcctca acctgcctct atatttttga tttttttttt tttttcagtc tcagttgatt
      601 ctccatcact ggctagagtg ctgatgaatg tttggtcaaa gaacaagcct gcccccacct
      661 ggtagcaaga ggcactgcct ccttgtagtg gaaaagggaa ctatgcaaat gagtagagct
      721 tcatttggca ctgggagacc caagtggaga agttctgtca gtctctgttt tagggacttg
      781 aacatgttaa acatactccg caccactaag ctatagccct aacactattt attgatgtaa
      841 taatttattt ttctatttac tttcatactc atgtgagtgg gtgctatgta gcaagtgtgg
      901 tgttcaggag atcatttttt ttgtttgttt gttttttttt tcgagacagg gtttctctgt
      961 atagccctgg ctgtcctgga actcactctg tagaccaggc tggcctcaaa ctcagaaatc
     1021 cgcctgcctc tgcctaggag atcatttttg agggttggtt ctctccttcc accatgtgag
     1081 tccctgggat taaactcagg tcattatact tgacagcaga ggctattacc catttagcca
     1141 tctcaccagg tcctaagtta ggttcttctg tcttttatgg tcctgaggat tgacctctgg
     1201 ggccttgtgt gtgcttggca aggaagtgct cctactactg aactatgccc tagtctaact
     1261 aatagattaa ttaattttaa aggtttattt acttgatgtg tgtgggtgtt taatgtctgc
     1321 acatatcatg tgtgtgcaat gttcgtggag accaggcaga gggcatagga gctcctggaa
     1381 ctggaattat atatggttgt tagctgcctt gtgagggctg ggacttgaac cctggttctg
     1441 tggactagca atcagtcctc ttaagcactg agccatctct ccacccccca ctattaattt
     1501 atttttgaga tcatgtttcc ctctgtagcc taggttgact tagaacttgt aattttcctg
     1561 cctcagcctt ccagagtgtt aggattacag gtgcacctta aacccaattc ccttctactt
     1621 agtttttttg aggctattta ggaatatgac tcccctctat taatagctgg tacccacaaa
     1681 ttctaccttt tcatttcctt ctttgtgtgg tctgttcaag acaccctatg ttacataggt
     1741 cctttttcgc atgatgcata aatgatgatg gttctgatgg ggtctaggtt actggcttgt
     1801 gtacttccag taattttggt tttgcttcag catggaagaa ctgtttcaag gttatcaaag
     1861 acaagctgaa tcgatgtgac gttaggactt gataatgtta gactgcattc agcacgtgat
     1921 gggatgttct ggatgtgctg tgactcagtg cttcctggtc actttgtact ttggttacaa
     1981 gtgataaatg tcctgtggtt cagtcctatg gtctttgcat tctcagtggc tcagctgtgc
     2041 ccctcccttt ctcacttcta aaagattcag gtgctcctct caccagtgta ttcctgctga
     2101 cttgggtatt cctgcaccgt tgggcttcag ttctcattat ggcttcacac aatcaaccca
     2161 tcccagcata tctattgtat ttaccccagt tttgtctttg ctgtttgttt ttgagtcagg
     2221 gtcttatgtc gcccaggctg gcctcaaact tgtcgcgtgg ttgagggtta ctttgaactt
     2281 ttcttttttt tttctttttt ttttttttta agatttattt atttatttat ttgttatatg
     2341 taagtacact gtagctgtcc tcagacactc cagaagaggg cgtcagatct cgttacagat
     2401 ggttgtgagc caccatgtgg ttgctgggat ttgaactcct gaccttcgga agagcagtcg
     2461 ggtgctctta cccactgagc catctcacca gcccctactt tgaacttttc atgcctccac
     2521 ttcctggggt tttaggcctg tgcctcctct gtgcctggtt tatgtggtgc taaggataga
     2581 actcagggct ttcaaatgct aagcaagcac tggctgagct ccacccccag tccttcatcc
     2641 ttcactgctt tggtgttgca gattgaaccc tgggccttgc acatggtagg aaagcaccgg
     2701 tcttctgaac tgcatcgtca gtcctttaag tttatatagt caactgtgtt agttattgtg
     2761 ttctatccct ggtaagggaa agcaatctac gtagagcatt gagagatgct gtcacttgag
     2821 tcagagcttg aaggaggaag agtaacttag caggaagatc caaacagcag gacagcatgc
     2881 acaggaggca ttaagaatgg aaacaccctg tgtgtcgtga ctctggcagg tgctagaaag
     2941 ctgctgtggc tgaacagtag tgattaggaa gggtgctgct gaaaagactg atgggagctc
     3001 acgtctcctc tctaagatgc ttaggaatag atttctgcca cttggaggtg ggggcgggga
     3061 gatactgtgt taccttaaat tttacttact ttgtggaggg cagtgcgcat gtgtggaggg
     3121 cagtgcgcat gtgtggaggg cagaagacag ctcctgggaa tcagttctcc tttcactgat
     3181 cttcactgat cactgaggag tgagctcagg tttgctggct aggcaccttc accagaggaa
     3241 catctttttt ctctttttgg tctttttttt tttaaagatt tatttattca ttatatgtaa
     3301 gtacactgta gctgtcttca gacgctctcg ttaatggatg gttgtgagcc accatgtggt
     3361 tgctgggatt tgaactccgg accttcagaa gagcagtagg gtgctcttac ccactgagcc
     3421 atctcaccag ccctttggtt tggttttttg agacagggtt tctctgtgta gccatggctg
     3481 tcctggaact cactctgtag accaggctgg cctcgaactc agagatccac ctgcctctgc
     3541 ctcccgagtg ctgggatcaa aggtgtgcgc caccacgccc ggctccagat gaacatctgg
     3601 ttggtttgat ccatcttgtt ttcagtttgg ttgattgaaa caccatgttt ctaatgagca
     3661 tttcatcaaa ccctttcaag gagtgcttct gcttcacagt ccacaaacct tgagctttca
     3721 cgctgtgtat aaactctgca ttggactttt cttatctgtc atgcccaggg caaggtagga
     3781 ctcttatcaa ctatgaacac tagcatgacc cttagcctct tccctcttcc taggagctgg
     3841 tgtatagact tttctctagt gaggccgggg aggactttgg gaattcaaaa ggacagtggc
     3901 aggtgatgag acttttcata tcccttcctc tctactgttc tggccttggc ttctgctttc
     3961 ttccaaatac atagcaatct tggctgccgg cctacgtggg gagagggaga aaggacctgt
     4021 tgtttccttc cgattctctc tgaaaataac ctaattggaa cacaaagttc ctgaaattgt
     4081 tggcacctcc tagagttgat gttcactttt cacttgtccc tgctgctaac ccagtctgcc
     4141 ccatttaccc ttcctcttgc caaggacctc tgccggggga atttgagaaa ctttcaaagt
     4201 gtgagggaac taagctggtt ccagggccta gcatagtcaa ctgatgtagc ccggcacact
     4261 agagggtttg agagttattg caaggtggtt aagagttaga acaggggctg gagagatggc
     4321 tcagcagtta agagcactca ctgctctttc aaaggtcccg agttcaattc ccaggaacca
     4381 catggtggct cacaaccatc tgtaacgagt tctgacgccc tcttctggta catctgaaga
     4441 cagctacagt gtagtcacat ataataagtg agtaaatagt tcttctggtg catctgaaga
     4501 cagctacagt gtagtcacat ataataagtg agtaaatagt taaaaaatag taaatagtta
     4561 aaaaaaaaag aaaaaaagag ttagaacagc ttgtatatta aaagggtagg tgcctcaata
     4621 ccttcggaat gtttattaca gccccattaa tctcttctgg atgcctgatt cccagtaatc
     4681 caacattctt gctagtaact agggtaagat aataagggta gtgaccactt caattctgca
     4741 gttgaatttt aaaatcaaga agaacggatt agagttgatc ctatgcagtt gatgaagcaa
     4801 aggattggag tgggtgccca gtaaatagtt gctgcctgag gaattaaatt caaggagtct
     4861 tgaaaggtga gtacgtgtaa gccccgagga gaatccagga actcagctaa gtccggagta
     4921 tgagaagatg tacgtaaagc agaagtgaga tgtagtgcca aggtctgtgt gaagttgggg
     4981 agatcagcct gagccgtgct tggggcgaag ggatcacgat gtggatggag actggtgtca
     5041 tcttgtggag agaaaagagg cctcgcaggg caccatgagc caggacaccg aagtggacat
     5101 gaaagatgtg gagctgaacg agctagaacc ggagaagcag cccatgaatg cagcggacgg
     5161 ggcggcggcc ggggagaaga acggtctggt gaagatcaag gtggcggagg acgagacgga
     5221 ggccggggtc aagttcaccg gcttatccaa ggaggagcta ctgaaggtag cgggcagccc
     5281 tggctgggtg cgcacccgct gggcgctgct gctgctcttc tggctcggtt ggctgggcat
     5341 gctggcgggc gccgtggtta tcatcgttcg ggcgccgcgc tgccgtgagc tgcctgtaca
     5401 gaggtggtgg cacaagggcg ccctctaccg catcggcgac cttcaggcct ttgtaggccg
     5461 ggatgcggga ggcatagctg gtctgaagag ccatctggag tacttgagca ccctgaaggt
     5521 gaagggcctg gtgttaggcc caattcacaa gaaccagaag gatgaaatca atgaaaccga
     5581 cctgaaacag attaatccca ctttgggctc ccaggaagat tttaaagacc ttctacaaag
     5641 tgccaagaaa aagagcattc acatcatttt ggacctcact cccaactacc agggccagaa
     5701 tgcgtggttc ctccctgctc aggctgacat tgtagccacc aaaatgaagg aagctctgag
     5761 ttcttggttg caggacggtg tggatggttt ccaattccgg gatgtgggaa agctgatgaa
     5821 tgcacccttg tacttggctg agtggcagaa tatcaccaag aacttaagtg aggacaggct
     5881 tttgattgca gggactgagt cctctgacct gcagcaaatt gtcaacatac ttgaatccac
     5941 cagcgacctg ctgttgacca gctcctacct gtcaaattcc actttcactg gggagcgtac
     6001 tgaatcccta gtcactaggt ttttgaatgc cactggcagc caatggtgca gctggagtgt
     6061 gtcgcaagca ggactcctcg cagactttat accggaccat cttctccgac tctaccagct
     6121 gctgctcttc actctgccag ggactcctgt ttttagctac ggggatgagc ttggccttca
     6181 gggtgccctt cctggacagc ctgcgaaggc cccactcatg ccgtggaatg agtccagcat
     6241 ctttcacatc ccaagacctg taagcctcaa catgacagtg aagggccaga atgaagaccc
     6301 tggctccctc cttacccagt tccggcggct gagtgacctt cggggtaagg agcgctctct
     6361 gttgcacggt gacttccatg cactgtcttc ctcacctgac ctcttctcct acatacgaca
     6421 ctgggaccag aatgagcgtt acctggtggt gctcaacttc cgagattcgg gccggtcagc
     6481 caggctaggg gcctccaacc tccctgctgg cataagcctg ccagccagcg ctaaactttt
     6541 gcttagtacc gacagtgccc ggcaaagccg tgaggaggac acctccctga agctggaaaa
     6601 cctgagcctg aatccttatg agggcttgct gttacagttc ccctttgtgg cctgatcctt
     6661 cctatgcaga acctaccacc ctcctttgtt ctccccaggc cttttggatt ctagtcttcc
     6721 tctccttgtt tttaaacttt tgcagattac atacgaattc ttatactggg tgtttttgtc
     6781 ttcaaataaa aacatcaccc ctgcctcatg a
//
