LOCUS       NM_028123               4065 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 37 (glycerol-3-phosphate
            transporter), member 3 (Slc37a3), transcript variant 2, mRNA.
ACCESSION   NM_028123
VERSION     NM_028123.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Yu,Z., Surface,L.E., Park,C.Y., Horlbeck,M.A., Wyant,G.A.,
            Abu-Remaileh,M., Peterson,T.R., Sabatini,D.M., Weissman,J.S. and
            O'Shea,E.K.
  TITLE     Identification of a transporter complex responsible for the
            cytosolic entry of nitrogen-containing bisphosphonates
  JOURNAL   Elife 7, e36620 (2018)
   PUBMED   29745899
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4065)
  AUTHORS   Kuninger,D., Kuzmickas,R., Peng,B., Pintar,J.E. and Rotwein,P.
  TITLE     Gene discovery by microarray: identification of novel genes induced
            during growth factor-mediated muscle cell survival and
            differentiation
  JOURNAL   Genomics 84 (5), 876-889 (2004)
   PUBMED   15475267
REFERENCE   4  (bases 1 to 4065)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   5  (bases 1 to 4065)
  AUTHORS   Amson,R.B., Nemani,M., Roperch,J.P., Israeli,D., Bougueleret,L., Le
            Gall,I., Medhioub,M., Linares-Cruz,G., Lethrosne,F., Pasturaud,P.,
            Piouffre,L., Prieur,S., Susini,L., Alvaro,V., Millasseau,P.,
            Guidicelli,C., Bui,H., Massart,C., Cazes,L., Dufour,F.,
            Bruzzoni-Giovanelli,H., Owadi,H., Hennion,C., Charpak,G.,
            Telerman,A. et al.
  TITLE     Isolation of 10 differentially expressed cDNAs in p53-induced
            apoptosis: activation of the vertebrate homologue of the drosophila
            seven in absentia gene
  JOURNAL   Proc Natl Acad Sci U S A 93 (9), 3953-3957 (1996)
   PUBMED   8632996
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ161523.1, AK076213.1 and AC153624.20.
            
            On Nov 13, 2009 this sequence version replaced NM_028123.2.
            
            Transcript Variant: This variant (2) differs in the 5' UTR compared
            to variant 1. Variants 1, 2, and 3 all encode the same isoform (a).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145242.1, BC099673.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                CJ161523.1         2-59
            59-2742             AK076213.1         2-2685
            2743-4065           AC153624.20        80006-81328         c
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 18.11 cM"
     gene            1..4065
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /note="solute carrier family 37 (glycerol-3-phosphate
                     transporter), member 3"
                     /db_xref="GeneID:72144"
                     /db_xref="MGI:MGI:1919394"
     exon            1..89
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            90..247
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             159..1643
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /note="isoform a is encoded by transcript variant 2; sugar
                     phosphate exchanger 3; solute carrier family 37 member 3"
                     /codon_start=1
                     /product="sugar phosphate exchanger 3 isoform a"
                     /protein_id="NP_082399.3"
                     /db_xref="CCDS:CCDS20020.1"
                     /db_xref="GeneID:72144"
                     /db_xref="MGI:MGI:1919394"
                     /translation="MAWPRFLQRGALLTSFSHHHLAVFLLTFFSYSLLHASRKTFSNV
                     KVSISKQWTPNAFNTSLDLPAEIWSSNHLFPSTEEATLFLGTLDTVFLFSYAVGLFIS
                     GIIGDRLNLRWVLSFGMCSSAFVVFVFGTLTEWLHFYNKWFYCGLWIVNGLLQSTGWP
                     CVVAVMGNWFGKAGRGVVFGLWSACASVGNILGAFLASSVLQYGYEYAFLVTASVQFA
                     GGIIIFFGLLVSPEEIGLPSIGAEESSEEDSQRPLIDGAENEDDYEPNYSIQEDRAVV
                     QVKAISFHQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIW
                     YDVGGIIGGTLLGFISDVLQKRAPVLALSLFLAVGSLVGYSRSPNNKSINALLMTITG
                     FFIGGPSNMVSSAISADLGRQELIQGNSEALATVTGIVDGTGSIGAAVGQYLVSLIQD
                     NLGWMWVFYFFILMTSCTILFILPLIVREVFSLVQRRQAHSLNE"
     exon            248..356
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            357..449
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            450..533
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            534..679
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            680..776
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            777..861
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            862..1040
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1182
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1183..1284
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1285..1332
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1333..1484
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1485..1550
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1551..4065
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2820..2825
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2850
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /note="major polyA site"
     regulatory      4042..4047
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      4065
                     /gene="Slc37a3"
                     /gene_synonym="2610507O21Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggaagctctg gccacatccc gctgggtgag gtggcggcgg gggcggcggg agcggagtct
       61 agcggagcgg gttcttcggc gggtctcaga aagaagaaac aatgtaactc agtcactggg
      121 aggaccgagg tcaaggtgaa gagggaggtg ggaagagcat ggcctggcca cgatttttgc
      181 agagaggagc tctcctcacc agcttcagcc atcaccacct tgctgtgttc ctgctcacgt
      241 tcttcagcta ttcattgctc catgcgtcaa gaaaaacatt tagcaatgtg aaagtcagta
      301 tctctaagca gtggacccca aatgctttta acacatcact tgacctgcct gcagagatct
      361 ggagcagcaa ccatctattt cccagcacag aggaagccac tctttttctt ggaacactag
      421 atactgtttt tctgttctcc tatgctgtgg gcctcttcat cagcggcatc ataggcgatc
      481 ggctgaattt gcgatgggtt ctgtcttttg gcatgtgctc ttctgcattc gtggtgtttg
      541 tctttggtac tcttacggaa tggctgcact tctacaacaa gtggttctac tgcggtctgt
      601 ggattgtgaa cggcctgctg cagtccactg gttggccctg tgtggttgct gtgatgggca
      661 actggtttgg gaaagctggc cgaggagttg tctttggtct ctggagtgcc tgtgcttcgg
      721 tgggcaatat tttgggagca ttcctggcct catcggttct ccagtatggt tatgagtacg
      781 cctttctggt gaccgcatct gtgcagtttg ctggtgggat catcatcttc tttggacttc
      841 tagtgtcacc agaagaaatt ggtctcccga gtatcggggc agaggagagc tcggaagaag
      901 attcacagag gccactcatc gatggtgctg aaaatgaaga tgactatgag cctaactatt
      961 cgatccagga ggacagggct gtcgtccaag tgaaggccat aagctttcat caggcttgct
     1021 gccttcctgg ggtcatcccg tactcactgg cctacgcctg cctgaagcta gtgaactact
     1081 ccttcttctt ctggctgccc ttttatctga gtaacaactt cgggtggaag gaagccgaag
     1141 ctgacaagct gtccatttgg tacgacgtcg gaggtatcat aggtgggact ctgctaggct
     1201 tcatctctga cgtactgcag aagagagcac ctgtgctggc cctcagcctc ttcctggccg
     1261 tcgggtccct tgttgggtat agccgctctc caaacaataa gtccatcaat gcgcttctga
     1321 tgaccattac agggtttttt atcggcggac catccaatat ggttagctct gctatttctg
     1381 cagacttggg tcgccaagag ctgatccaag ggaacagcga ggctctggcg actgtcacgg
     1441 ggatcgtcga tggaacaggg agtattggtg ctgctgtggg ccagtatctg gtgtctttga
     1501 tccaggacaa cttaggatgg atgtgggttt tctacttttt tattctcatg acaagttgta
     1561 caattctgtt tatcttgccg ttaatagtga gggaagtatt ttctcttgtg caaaggagac
     1621 aagctcactc acttaatgaa tgacggggtc ccacaggaga ggacggactg ggaagcttag
     1681 gagggcccat aggccttcag ttcactcgtg tggagttctc taaacactaa tggagccttg
     1741 gcttgtcagg catcctacaa cactgccagc taccccagac acaggcaagg aaggggcgaa
     1801 ttattttttt acactacagc agttcctgga gaattttata acatttgtga atgtactgaa
     1861 aggaaaatga acctgccagc atctttgttg ggcttgtcag cttatccctc taacgctaga
     1921 taccggtttt ggtcctggac ccttgttctt cagccttaat caagagctaa gtgatcagga
     1981 ggcagaatca tgttgtattg atgagaagac tatggtacgg agctctgata ccacatttgc
     2041 agagagtgga tcaccattaa ggcatcagag cagagctgag tccagatgat gctacaggcc
     2101 tgcggtggac gaaacacacc tttaccaagg tggaaagatc acactgtgcg atggctgggt
     2161 cactctgtgg cttctggaag ttctcgtcct ctctagaatg gctgttggct tgttctcctc
     2221 cgacttcatt cacatttgac tgactcctag gagcagtctt ctgtttgtgg actattatat
     2281 ttcagacatt ccagtatgga gctttcaaac ccacgttcac agtctgggaa cgacaagacc
     2341 ctctgagaag ctgttctatg tagccttatt gttggaagat tggtctctgt cacagccgca
     2401 gccaggttcc tgaagttccc tcagcagaag atggaaagac aaaggctctt tgttctgggg
     2461 gtatgaagtg tatgtattga atcatgttag tggattgtta gggcctgagg cctgcccttt
     2521 agaagattgt agtgtgtatg tcttcaagac tatgaattct ataagaatca atactttaag
     2581 gtcattctgt acatacattt taaattatgt aaactaggag gaaaatgtac aattttgagg
     2641 gatacctaat tcacgttggg ttaggaaata ttcttccacc tcttgcttta tgctccaagg
     2701 tatgtattga tgaacttgca ggaatactac agatttctga ccattttcct gttcagtcac
     2761 tgacataaag ggaaaacaca aaacatagga aggtagggga aacaaacccc cgcttttgta
     2821 ataaacgtcc agcggttgtt tggttactta gtccctgctt aagcttgaca ttgcctctca
     2881 ctttcccttt ctgtgtggtg ctggggtgga ctctgggtcc tgcacatgcc cagtgtgtct
     2941 cccaatgccc tgcactccca gcccagcccc acagttaagt acagcggtgc cttgagttcc
     3001 ccagcacttg tcactggaag cagacagccc acagccttgc caggtggagc tgctcccctg
     3061 ccctaggtcc tggggggcct cattcccatt agagggagca ccccctctct ccctctgagg
     3121 cagactgctc agtggtgcct gcagatgaag cctctgtcgc atgtggctca gaggttcgtc
     3181 ctcctcagtg ggttcatctt catgttctca tatcagcccg tgccgccttt tccaggttag
     3241 tcttgagcac ctaccccctt ctccgtggct ctccaggctc tgcctgaaat ggagctgtaa
     3301 acactcagaa caggatgaaa cgatgttttt ctctctgaat ctgagtacgt tctccatcta
     3361 cttctgccca cctgggaagg aagtggcttt aacaaacgcc taggcatttg cctcattttc
     3421 ttattaaatg tttgcctgga aggaagggtc agagctggcg agctggctgg gtgggtgaag
     3481 tgcttgcttt gaaagcatga atacctgagt ttggactctc agtccccgtg tacacatctg
     3541 ggtgcagcgg cacacagttc cagtgctcag gagacattgg aaacaggtct ggctgagcta
     3601 gagtgctgag gttcaggaag agagcctgtc tcagaagaca gtgacgggct ggagaggtgg
     3661 ctctgtggct ttagagtact agctgctctc ccagaggacc cagattcagt tcccagaacc
     3721 cacatgacag tcacaaccat ctgcatacct ccagagtcaa gagatacagc acccacttct
     3781 gaccttcaca ggtactacat gcacacggta cacttaggca aaacacaaac acacatggat
     3841 actacttaaa agggggaggg ggtgtgatag aggaagatag ccagtgttga cccctggtct
     3901 tcatgtgatc atgtacccac acacctatgc acacgtgcta acatatatca aaaatagcag
     3961 aaaaggccac agtaaaggct ggtttgaaaa tggattaaaa attaatttgg gggaaaatcg
     4021 taggaggctt tcacacactg aaataaagaa tgactggatg ggaaa
//
