LOCUS       NM_001101483            1596 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus solute carrier family 35, member G2 (Slc35g2), mRNA.
ACCESSION   NM_001101483 XM_147067 XM_907810
VERSION     NM_001101483.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY726562.1, CB588129.1, AC129223.5, AV173252.2 and CK794116.1.
            
            On or before Nov 16, 2007 this sequence version replaced
            XM_907810.3, XM_147067.6.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no quality transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY726562.1, SRR1660817.13105.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-148               BY726562.1         1-148
            149-579             CB588129.1         155-585
            580-743             CB588129.1         587-750
            744-952             AC129223.5         114236-114444       c
            953-1557            AV173252.2         4-608
            1558-1596           CK794116.1         485-523
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 52.74 cM"
     gene            1..1596
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /note="solute carrier family 35, member G2"
                     /db_xref="GeneID:245020"
                     /db_xref="MGI:MGI:2685365"
     exon            1..138
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /inference="alignment:Splign:2.1.0"
     exon            139..1585
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /inference="alignment:Splign:2.1.0"
     CDS             157..1395
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /note="transmembrane protein 22"
                     /codon_start=1
                     /product="solute carrier family 35 member G2"
                     /protein_id="NP_001094953.1"
                     /db_xref="CCDS:CCDS52898.1"
                     /db_xref="GeneID:245020"
                     /db_xref="MGI:MGI:2685365"
                     /translation="MDTSPSKKYPIKKRVKIHPNTVMVKYTSHYPQPGDDGYEEINED
                     YGRFMEENPKKSLLSEMRRKGRTLFGTMDTQPSSSEDPRASGMGQFQSFAEKNIFQSR
                     KMWLVLFGSALAHGCVALITRLISDRSKVPSLELIFIRSVLQVLSVIVVCYYQEAPFG
                     PSGYRLRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKM
                     AYVDMATVVCSILGVCLVMIPNIADEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYR
                     SIREKISMWTALFTFGWTGTIWGLSTMFVLQEPIIPLDGATWSYLIAICLCSTAAFLG
                     VYYALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSVYDVFGGVIIMISVFVLAGYK
                     LYWRNVRREDYQEILDSPIK"
     regulatory      1387..1392
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /note="hexamer: ATTAAA"
     polyA_site      1412
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /note="major polyA site"
     regulatory      1562..1567
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /note="hexamer: AATAAA"
     polyA_site      1583
                     /gene="Slc35g2"
                     /gene_synonym="Gm519; Tmem22"
                     /note="major polyA site"
ORIGIN      
        1 ttgctggccg cccctggcag tccaggctgc agtggtcccc gccgagcgcg cggcggcctc
       61 agctggctag ggaggccaga ccaggagcgc gggagtccgc tagtgccccc ggcgcaccgg
      121 cctagccgcg acttccagga tttgttatct gaagaaatgg atacttctcc atccaaaaaa
      181 tatccaatta aaaaacgggt gaaaatccat cccaacacag tcatggtgaa atatacctct
      241 cattatcccc aacctgggga tgatgggtat gaagaaatca acgaagacta tggtaggttt
      301 atggaagaaa acccaaagaa aagtctgctg agtgaaatga gaagaaaagg aagaactctg
      361 tttggaacca tggacactca gccttcgtcg tcagaagacc caagagccag tggcatggga
      421 cagttccaga gctttgcaga aaaaaacatt tttcagtccc gaaaaatgtg gctagtgctg
      481 tttgggtctg ctttggcgca cggctgtgtg gctctcatca cgaggctcat ttccgaccgt
      541 tctaaagttc catccttaga actgattttt atccggtctg tcttacaggt cttgtccgtg
      601 atagttgtgt gttattacca ggaagcgccc tttgggccca gcggatacag attacgactt
      661 ttcttttatg gagtatgcaa tgtgatttcc atcacctgtg cttatacctc cttttcaata
      721 gttcctccga gcaatgggac cacgatgtgg agagccacca ccaccgtttt cagtgccatt
      781 ttagcctttc tacttgtaga tgagaaaatg gcgtatgttg acatggctac agtggtttgc
      841 agcatcttag gtgtttgtct tgtcatgatc cccaacattg ccgatgagga caattctctg
      901 ttaaacgcct ggaaggaagc cttcgggtat acaatgactg tgatggccgg gttgaccacg
      961 gcgctttcta tgatagtata cagatccatc agggagaaga tcagcatgtg gaccgcactg
     1021 tttaccttcg gttggactgg aacaatctgg ggattatcta ctatgtttgt ccttcaagag
     1081 cccatcattc ctttagacgg agcaacatgg agctatctca ttgctatatg cctctgttct
     1141 actgcagcgt tcttaggtgt ttattacgcc ttggacaaat tccacccagc tttggttagc
     1201 acagtacaac atttggagat tgtggtagct atggtcttac agcttctagt gttacacata
     1261 tttcctagtg tttatgatgt ttttggaggg gtgatcatta tgattagtgt atttgttctt
     1321 gctggctata aactttactg gaggaatgta aggagggaag attatcagga aatactggac
     1381 tctcccatta aatgaatacc tggctattat tatcatcttg ttaatgtcta gtcattaaca
     1441 tgcacactgc cattttaata tttacctgta gatgtctttt gtgttatatt attgatagag
     1501 tgctatatag tataaataat tatgcagatg cagaaaaata taccagtcta atatattaaa
     1561 gaataaatat taaatagatg aaataaaaaa aaaaaa
//
