LOCUS       NM_175507               3471 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 35, member G1 (Slc35g1), mRNA.
ACCESSION   NM_175507 XM_915093
VERSION     NM_175507.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Wang,J., Yu,J., Wang,M., Zhang,L., Yang,K., Du,X., Wu,J., Wang,X.,
            Li,F. and Qiu,Z.
  TITLE     Discovery and Validation of Novel Genes in a Large Chinese Autism
            Spectrum Disorder Cohort
  JOURNAL   Biol Psychiatry 94 (10), 792-803 (2023)
   PUBMED   37393044
  REMARK    GeneRIF: Discovery and Validation of Novel Genes in a Large Chinese
            Autism Spectrum Disorder Cohort.
REFERENCE   3  (bases 1 to 3471)
  AUTHORS   Kim,T.D., Jung,H.R., Seo,S.H., Oh,S.C., Ban,Y., Tan,X., Min Kim,J.,
            Hyun Lee,S., Koh,D.S., Jung,H., Park,Y.J., Ran Yoon,S., Doh,J.,
            Ha,S.J., Choi,I. and Greenberg,P.D.
  TITLE     MicroRNA-150 modulates intracellular Ca 2+ levels in naive CD8+ T
            cells by targeting TMEM20
  JOURNAL   Sci Rep 7 (1), 2623 (2017)
   PUBMED   28572627
  REMARK    GeneRIF: Study shows that microRNA-150 modulates intracellular Ca
            (2+) levels in naive CD8(+) T cells by targeting transmembrane
            protein 20.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3471)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 3471)
  AUTHORS   Quina,L.A., Wang,S., Ng,L. and Turner,E.E.
  TITLE     Brn3a and Nurr1 mediate a gene regulatory pathway for habenula
            development
  JOURNAL   J Neurosci 29 (45), 14309-14322 (2009)
   PUBMED   19906978
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC116871.6 and AC124632.11.
            
            On Nov 17, 2006 this sequence version replaced NM_175507.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK041618.1, AK171987.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-322               AC116871.6         156157-156478
            323-503             AC116871.6         160611-160791
            504-3471            AC124632.11        116521-119488       c
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 33.03 cM"
     gene            1..3471
                     /gene="Slc35g1"
                     /gene_synonym="D330039I19Rik; Tmem20"
                     /note="solute carrier family 35, member G1"
                     /db_xref="GeneID:240660"
                     /db_xref="MGI:MGI:2444789"
     exon            1..322
                     /gene="Slc35g1"
                     /gene_synonym="D330039I19Rik; Tmem20"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..1242
                     /gene="Slc35g1"
                     /gene_synonym="D330039I19Rik; Tmem20"
                     /note="transmembrane protein 20"
                     /codon_start=1
                     /product="solute carrier family 35 member G1"
                     /protein_id="NP_780716.1"
                     /db_xref="CCDS:CCDS29787.1"
                     /db_xref="GeneID:240660"
                     /db_xref="MGI:MGI:2444789"
                     /translation="MGPPESAAELAAEAVELREPELQLADPASPGEEHVDVEAEGAPG
                     RGRCWPCGAWACGSRGEPEAKKKAPCPGLGLFYTVLSAFLFSVASLFVKKVQGVHAVE
                     ISAFRCVVQMLVIIPCLIYRKTGFIGPKGQRLFLFLRGVFGSSAMILMYYAFQTTSLA
                     DATVIAFSCPVFTSIFAWIFLKEKYSLWDAFFTLFAIAGVILIVRPPFIFGSDTSGMR
                     ESYSEHIKGTFAAIGHAVLAAITLVILRKMGKSVDYFLSIWYYVILGLPEAIIILFVI
                     GEWSLPYCGLDRLFLILIGLLGLGGQIFITKAVQIEKAGLVAIMKTMDIVFAFIFQIA
                     FFDNVPTWWTVGGALCVVVSTTGATIRRWLQGSK"
     exon            323..503
                     /gene="Slc35g1"
                     /gene_synonym="D330039I19Rik; Tmem20"
                     /inference="alignment:Splign:2.1.0"
     exon            504..3471
                     /gene="Slc35g1"
                     /gene_synonym="D330039I19Rik; Tmem20"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggacaagcgc gcggagccgg gcgcacgcgc acgcgcacac gcaccggctc gccgggggcc
       61 ggaagagccg agcggccggg cggcagctgc gggcgccaga aggcgcgcgg ctgcggggag
      121 agcgcgggct gcgggatggg gcccccggag agcgcggcgg agcttgcagc cgaggcggtg
      181 gagctgcgcg agcccgagct gcagctcgcg gacccggcgt cccccggcga ggagcacgtg
      241 gacgtcgagg cggagggcgc ccctggccgc ggcaggtgct ggccgtgtgg agcctgggcg
      301 tgcggctcgc gtggggagcc cgaagccaag aagaaagcac cctgccccgg acttggcttg
      361 ttttacacgg tgttgtctgc cttccttttc tcagtggcct ctttatttgt taaaaaagtg
      421 caaggcgtcc atgctgtaga gatcagtgcg tttcgatgcg tggtccaaat gctagttatt
      481 atcccttgct taatatacag aaaaacgggg ttcataggtc ccaaaggcca gcgactcttc
      541 ctcttcctca gaggggtctt tggttccagt gccatgatcc tcatgtatta tgcgttccag
      601 acaacgtccc tcgcagacgc cacagttatt gcgtttagct gtcccgtgtt tacgtccata
      661 tttgcttgga tatttctcaa ggaaaagtat agcctctggg atgctttctt caccttgttt
      721 gcaatcgctg gagtgatact tatcgtgaga ccaccattta tatttggttc cgacacttca
      781 gggatgagag aaagctattc agagcacatt aaggggacgt ttgctgcgat cggacacgct
      841 gtgctagctg cgatcactct ggttattctg aggaaaatgg gaaaatctgt ggactacttt
      901 ctgagcatct ggtactatgt catacttggc cttcccgaag ccatcatcat cctctttgtc
      961 ataggagagt ggagtctgcc ctactgtggg ctggacaggc tgtttctcat actcattgga
     1021 ctcctaggtt tggggggtca gatatttatc actaaagcag ttcaaataga aaaagcagga
     1081 ctcgtagcga taatgaagac catggatata gtctttgctt tcatctttca gattgctttc
     1141 tttgataatg taccaacttg gtggacggtg ggtggggccc tctgtgtggt ggtcagcacc
     1201 actggagcaa ccattcgtcg atggctgcag ggttccaaat gaagtgtcac tgctgaaacc
     1261 tggtttttat tttcaagtgt gctgtcacct agctcagaca tcttgcacac ccacacacat
     1321 acctggagaa tcttcatcac tcattggctt tctttaatac ctttcataaa gtgccatttt
     1381 taaacatagt gcgtttttag ttaagagtag ctagctagcc gggcgtgttg gcgcacgcct
     1441 ttaatcccag cactcgggag gcagaggcag gcggatttct gagtttgagg ccagcctggt
     1501 ctacaaagtg agttccagga cagccaaggc tacacagaga agccctgtct cgaaaaacaa
     1561 aaacaaaaaa gagtagctag ctaggctagc ctcacagtct ggatagcttt tatctttgct
     1621 ttggctcctt ggttgggtta ccattgatga gaagggagct catttgagga atttcagaaa
     1681 tttttatgag tacaattttt aaaatttatt tctgacccgg gatgtggatg ggagatcctc
     1741 tattttagca gtgcacataa gaagctcaac gttgacaatg ctgctctagt tagtactgtg
     1801 ctaatctgtt gattgcaata tcatcccact taggatgcca aagctgcaac ttggtctagg
     1861 tgcctaccta cccataggag tataagcgaa ccagccttat tctcaaggat cttagagatg
     1921 attactacac ttttaactca tgtgtgcctt ttcgttttga tgctgggact ttttatatgt
     1981 actctgaaca gagccttcag cttgccacat gtggttagca gttctctctt tcagaatatt
     2041 aacaactctg gctatcattt tgaatttcag ttgtctcctg ttttattgaa attgcacttt
     2101 ttttttaaca ttccgagatt tccaaccttg aaatcatgag agcaaaatct tggcgtgatc
     2161 agtgtgtaca ttcccatcct gaggtgattt cacttcagat gcggtggttt ttctacaaat
     2221 tctctttgaa ttcatagtgt gatgccaaat acaatttttt tctcaggatt gtactaggct
     2281 gggccattat cagattgccc agattctacc gttttcattt tcaaaaccca cagttctaga
     2341 aggttcatcc cgcaggctcc cttcgcatta aaccaaatat ttataccttt acagtacatg
     2401 tctgttaata aacgtacagt ctttttccat cttggaatgg tatgttataa tgcttgtggc
     2461 atacgaaaaa tgtaaagact tgttactcca tagttgattg gttttcccag tcttttgcat
     2521 atacggaaag aacacaggta caagccagtc tttgacacac aatcctagtg tgaacttaga
     2581 cagtagattc tatctgtgga gcaccagcag gccagtactc ctctgtgaaa gaggaaaact
     2641 tggtagattg ggagtaaatg accatgcgtc tttggggcgc tttggatgcc tttatggtga
     2701 ggccattgtg gctgccacct cttactttgt cagacactgt ctactgttat cattagctgc
     2761 agacttgagg ggctattgct ctctcccaca ctcctcacag ctcttctgga ggaagggact
     2821 ggtctcctgg atcttacatt tagctatgaa aggatcttct ccagtagttc ctaagaggaa
     2881 ctttgagttt ggtggtttta aatcacctta gccacctgac atcctacata tgtacttagc
     2941 tgaatcacct cagttgcatt tgaccccgca tagatctgcc aatggtgccg ttctaccaac
     3001 atcctagaaa acacagagtc agcagactct tagtactctg gaggggtctt agagggcatc
     3061 ctgagggatg acgggaggga gggctgcaat agctggtttc catagcagcc tcctcttact
     3121 gagttccact cctggagtac caccaaactt acacaataga agagtgtctg ggatagtgga
     3181 agataacccc tttggaaata cattatattt caactgtgtc ttaagtacat ggatgtcagg
     3241 atatgtggct gacattggag acaatgtttc ttataccaac ctttacaggg tatgattttt
     3301 aaacaatgtt caagtggtat acaaggctat gtattgtaac aattacgggg gtttatgtat
     3361 tttccaaaga ttgtagtttc tatatcttgc aaagggaaat atttttttcc taatgtgttt
     3421 ttattttgta agtaataaaa tcataaaaga aagatgttgg gttttacaac t
//
