LOCUS       NM_001363500            2761 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus solute carrier family 35, member F3 (Slc35f3),
            transcript variant 1, mRNA.
ACCESSION   NM_001363500 XM_011248333
VERSION     NM_001363500.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2761)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125192.3 and AC122236.5.
            
            On May 19, 2018 this sequence version replaced XM_011248333.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660813.220112.1,
                                           SRR1660819.71863.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164132
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                AC125192.3         58111-58161
            52-281              AC125192.3         58500-58729
            282-606             AC122236.5         131156-131480
            607-826             AC122236.5         192272-192491
            827-952             AC122236.5         196986-197111
            953-1145            AC122236.5         199240-199432
            1146-1235           AC122236.5         201201-201290
            1236-2761           AC122236.5         204589-206114
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 73.82 cM"
     gene            1..2761
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /note="solute carrier family 35, member F3"
                     /db_xref="GeneID:210027"
                     /db_xref="MGI:MGI:2444426"
     exon            1..51
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            52..281
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..1471
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /note="isoform 1 is encoded by transcript variant 1;
                     putative thiamine transporter SLC35F3"
                     /codon_start=1
                     /product="solute carrier family 35 member F3 isoform 1"
                     /protein_id="NP_001350429.1"
                     /db_xref="GeneID:210027"
                     /db_xref="MGI:MGI:2444426"
                     /translation="MRRSPDVSPRRLSDISPQLRQLKYLVVDEAIKEDLKWSRSVEDL
                     TSGPVGLTSIEERILRITGYYGYQPWATSYKREERPREPPGPAEAQAPAGTEAGGRTS
                     RHNWTCSQERLKKVFWGVAVVFCVCASWAGSTQLARLTFKTFDAPFTLTWFATNWNFL
                     FFPLYYAGHVCKSTEKQSMKQRYRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLY
                     LHAIKKINATDVSVLFCCNKSFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADG
                     FHSHSVIGIALVVGSASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNILFITCIPV
                     ILYFTRVEYWNSFDDIPWGNLCGFSILLLTFNIVLNFGIAVTYPTLMSLGIVLSVPVN
                     AVVDHYTSQIVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVRKKEETAES
                     SGDLGTGPQSRSRRARPSFAR"
     exon            282..606
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            607..826
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            827..952
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            953..1145
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1146..1235
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1236..2761
                     /gene="Slc35f3"
                     /gene_synonym="B230375D17Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggatccga gagtttcccg gcggcgcttc caggaccaag agcattgctg ttggcatgag
       61 gaggtcaccg gacgtcagcc cgcggagact gtccgacatc agtcctcagc tccggcagct
      121 caagtacttg gtggtggatg aggcgatcaa ggaggatctg aaatggtctc gctctgtgga
      181 ggatctcacc agtggaccgg tgggactcac atccatcgag gagcggatcc tgcgcatcac
      241 aggctactat ggctaccagc cctgggcgac cagctacaaa agggaggagc gcccccggga
      301 gcccccgggc cctgcagagg cccaggcgcc agctgggaca gaggctggtg ggaggacaag
      361 ccggcacaac tggacatgtt ctcaggagcg gctcaagaag gtcttctggg gtgtggctgt
      421 cgtgttctgc gtgtgcgcct cctgggccgg ctccacgcag ctcgccaggc tgactttcaa
      481 gaccttcgac gcaccgttca ccctgacgtg gtttgccacc aactggaact ttctgttctt
      541 cccattgtac tacgcaggac atgtgtgcaa atccacagag aagcagtcta tgaaacagag
      601 atacagggaa tgctgtcggt tctttggaga caatggcttg actctgaaag tgttctttac
      661 caaggcagca ccttttggtg ttctttggac tctcacaaac tacctgtact tacacgcaat
      721 aaagaagata aacgccacag acgtctccgt cctgttctgc tgcaacaaat catttgtttt
      781 cttgctgtcg tggattgttc tcagggacag attcatggga gtgaggatcg tggccgccat
      841 ccttgccatc gctggcattg tcatgatgac ctatgccgat ggcttccaca gtcactcagt
      901 cattggcata gccctggtgg tgggctctgc ttccatgtca gccctttaca aggttctgtt
      961 caagctgctg ctgggcagcg ccaagttcgg agaagcggcc ttattcctgt ccatcttggg
     1021 tgtgttcaac atcctcttca tcacctgcat ccccgtcatc ctctatttca ccagggtgga
     1081 gtactggaac tccttcgacg acattccatg gggaaacctc tgtgggtttt ccattctctt
     1141 attgacattc aatattgtat taaattttgg aattgctgtc acgtatccca cgctgatgtc
     1201 tcttggaatt gtcctcagtg tacctgtaaa tgcagtggtc gatcactaca ccagtcagat
     1261 agtcttcaac ggggtccggg tcatcgccat catcattatc ggcctgggct tcctcctcct
     1321 gctccttcca gaagagtggg atgtctggtt gatcaagttg ctcacccgcc tcaaagtgag
     1381 gaagaaggag gagacagcag agagcagcgg ggacttgggc acgggtcccc agagcaggag
     1441 cagaagagcc cgcccatcct tcgctcgctg agaaaactcc tctagaactc tgggatgcac
     1501 ccatggtaat gtttttgagg tctattcctg atggaggaac ctcagttggg tgaggtgtac
     1561 atacatgtac agttttggta actgcagtaa gttctacggt atttattggc atgtccaatt
     1621 tgcttgcact tttccacgtc agaccttcca ctaagggtac cgattcaaaa cagatgagaa
     1681 aagaacctct cagcgcttct taaatgaatg taaagcgagg taaaatgagc cttgtgtcgg
     1741 tctcttcaga ggacaggcaa gctggacaag ccagggcaaa ggctctgcct cttagcaatt
     1801 gaaagtgaca ttgtgcactg tgattatttt tcagctatag taggtcatat tttgttttat
     1861 accagaactg tatacttaat tttaaggaat ctcaatgaac caaaagataa ttgtcagtta
     1921 atttggatgg gtagatggat agatggataa atggatggat gggtgggtgg atggatggat
     1981 ggatggatgg atggatcgat cgatggatag ataaacatat aggtggatag acggttgatg
     2041 gacagatggg tggatgggaa aggaaaggaa gagaggcaaa gcagaaaagg ataatgacat
     2101 gaagataaac ggaggacagg cctgtgctgg gtcacatgat agaaaacaga actccgacct
     2161 agctggtctg gtctcacaag accatgagga gaactcagtg ccttctacag catctctgtc
     2221 ctatgtgaag cgaggtgaca ttatatgtca ctggcgccgt cttataattt agatgtagaa
     2281 atctttaaaa aaaaaaaaca aacacaaact atatgtgtat atgtgtgttt aaacgtgaca
     2341 aagccagtgg ccagtgtatt tggagggtgg ttggcggtgt gtgacatgca cagcaggtgc
     2401 actgtgtggg agggacggct ggtggctttc acttccagac caagactgaa acattattta
     2461 ctgagtctgt aagcctttta aagaaacttt taagcgccgg gctgtttact tacacaattt
     2521 aggtctgccg gagacttcta tctgtgatag atctgtacag agggactggg cttagagttt
     2581 actatttttg aagtttacat tgttacatat aaatgggaac ctgattttga aatggtatca
     2641 tatcctaaag gtgcattctg gaaccatgga gtctttcgtt tcctgggggg aaggggtact
     2701 catgacctga actttttagc caattattct cagtttccat aacttgtttg gccaaacaga
     2761 t
//
