LOCUS       NM_028060               2568 bp    mRNA    linear   ROD 31-MAY-2024
DEFINITION  Mus musculus solute carrier family 35, member F2 (Slc35f2), mRNA.
ACCESSION   NM_028060 XM_356155
VERSION     NM_028060.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ye,A., He,H. and Kim,J.
  TITLE     PEG3 binds to H19-ICR as a transcriptional repressor
  JOURNAL   Epigenetics 11 (12), 889-900 (2016)
   PUBMED   27824289
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Shalom-Barak,T., Zhang,X., Chu,T., Timothy Schaiff,W., Reddy,J.K.,
            Xu,J., Sadovsky,Y. and Barak,Y.
  TITLE     Placental PPARgamma regulates spatiotemporally diverse genes and a
            unique metabolic network
  JOURNAL   Dev Biol 372 (1), 143-155 (2012)
   PUBMED   22967998
REFERENCE   3  (bases 1 to 2568)
  AUTHORS   Tang,F., Barbacioru,C., Nordman,E., Bao,S., Lee,C., Wang,X.,
            Tuch,B.B., Heard,E., Lao,K. and Surani,M.A.
  TITLE     Deterministic and stochastic allele specific gene expression in
            single mouse blastomeres
  JOURNAL   PLoS One 6 (6), e21208 (2011)
   PUBMED   21731673
REFERENCE   4  (bases 1 to 2568)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CD551889.1, AK005182.1, CD554029.1 and BB729203.1.
            
            On Nov 15, 2007 this sequence version replaced NM_028060.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC055843.1, SRR1660819.123354.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-205               CD551889.1         1-205
            206-536             AK005182.1         2-332
            537-687             CD554029.1         312-462
            688-2527            AK005182.1         484-2323
            2528-2568           BB729203.1         429-469
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 29.12 cM"
     gene            1..2568
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /note="solute carrier family 35, member F2"
                     /db_xref="GeneID:72022"
                     /db_xref="MGI:MGI:1919272"
     exon            1..360
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             251..1378
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /codon_start=1
                     /product="solute carrier family 35 member F2"
                     /protein_id="NP_082336.3"
                     /db_xref="CCDS:CCDS40639.1"
                     /db_xref="GeneID:72022"
                     /db_xref="MGI:MGI:1919272"
                     /translation="MEAESPASAGASEPRALGTVDSIGSQLSRIRRKLFTWDILKTIA
                     LGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLE
                     ILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARY
                     KVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEY
                     IVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLY
                     SFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFILYCS
                     TPTRTVEPPESSVPPVTSIGIDNLGLKLEESGLPETHSAVL"
     exon            361..536
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            537..664
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            665..824
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            825..981
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            982..1034
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1035..1189
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..2568
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2511..2516
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2530
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
     regulatory      2542..2547
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2561
                     /gene="Slc35f2"
                     /gene_synonym="1500009K05Rik"
                     /note="major polyA site"
ORIGIN      
        1 ccagcttccc aaaggtgcca ggtggcgatc tgcaaaagca ttgtctggcc cttagggcct
       61 gacagttaat gatttgtcgc acgagcaggg cggaggagta tcgggacgcg ggcgagcgta
      121 ctagagagcg cagcaggaga gcaaggcagg gcgcgagccg agtccgcgcc gtactcacag
      181 gcaccgcctc ctgtcttccg ggcccgagca cttctcgggg ttccgggcac gcgaggctcg
      241 aagagacccc atggaggctg agtcgccggc gagtgcgggg gccagcgagc cccgggcgct
      301 gggtacggtg gacagtatcg gcagccagct gagcaggatc cgacgcaaac tcttcacctg
      361 ggatattttg aagaccatag ctctgggcca gatgctgtcc ttgtgtattt gcggcacggc
      421 catcaccagc cagtatttgg cagaaaagta cagagtgaac acgcccatgc tgcagagttt
      481 catcaattac tgcttgctct tcctggttta cacgttgatg ctggcgtttc agtcaggcag
      541 tgataacctc ctggagattt tgagaagaaa atggtggaag tatactctct tggggcttgc
      601 cgatgtggaa gccaattatc tgattgtcag agcataccag tacacgactc tgaccagtgt
      661 ccagctcttg gattgctttg ggattcctgt gttgatggct ctctcctggt ttattctccg
      721 ggcaagatac aaagtgatcc acttcattgc tgtgtttgtc tgtctgctgg gtgtagggac
      781 catggttggt gcagacatat tagctgggcg agaagataat tcagggagtg atgttcttat
      841 tggtgacatc ttagtcctgc ttggggcttc cctgtatgct gtgtctaacg tgtgtgaaga
      901 atacatcgtg aagaagctga gcagacagga atttttagga atggtgggac tatttggaac
      961 aatcatcagc ggcatacagc tattgattgt ggaatataaa gacattgccc ggattcagtg
     1021 ggactggaaa attgccctgt tatttgtggc atttgccctc tgtatgtttt gcctgtacag
     1081 cttcatgcca ttggtgatta aagtcacgag tgccacttca gtcaacctgg gcatcctgac
     1141 agctgacctt tacagccttt tctttgggct ttttttattc gagtataagt tctcaggact
     1201 ctacatcctg tcgttcacag tcatcatggt tggcttcatc ttgtactgtt ccaccccaac
     1261 gcgcacggta gagcccccag aaagcagcgt gccccctgtt accagcatcg ggatcgacaa
     1321 tttgggactg aagcttgagg agagtggtct cccggagacc cactctgcag tcttgtagct
     1381 ggacaagcca cagactctgg catgtcacca ggagagagca gaacctgcca ctgccaaggg
     1441 cgcatttgag gcgacaccag cctcagaggc gaaacccact gcattggatt acatccgtgg
     1501 ttagattgta gaaaggagca ctgaccagtg gttccaaact agaaatacta aaatagagca
     1561 gagagcccaa gggtagtgag cgcgtgtgct gagtaccagt acctgtcagc gtcaggtttc
     1621 agagacacat gtaagaagag aagggcttca gggctgttta ggtagttagg agttgggaca
     1681 gtctgggatg ttggtgcaat aagattcctc tgttggaagc ttcacgtttt catcctgctg
     1741 gggcagtcac tgtccatgga ccttgtggaa tttagacacc catgaccgaa ggtccctggt
     1801 ggcaggtggt gggaaaaatg ggcggggcag cacttgagaa ctcccaagat aaactgtgac
     1861 gactttgaaa gcagctaatg agtacaggaa tccaggaacc ctctcccagt catatctctc
     1921 aatgttttat aacatgtctc tcccctttgt ccctcttgct tgtccctagg cacgtttgct
     1981 cctgtgttct gagttctgga gcaaactgct ctcaaagcct gttatattgg gcatccctcc
     2041 cattcagtgc cacactatac gctgagagca aatacgctca agttaccctt gggtaatgtc
     2101 ctggtgcccg ggaagagtca tcccaattgg cctcacctca ccaagccaca gtttagaaaa
     2161 ttaacctgct gcaacttctc atagcaaggc aagagcttga gaacttggct gctatctctg
     2221 gttggaaaaa tgcattattg ttaaaaggaa gacgcactgc taatcattcc ccactgaagc
     2281 gaggaacact gaccaatggt tccatgctag gaatcctaca gtaggttggt gctggggttc
     2341 tggagtcctg actgtaagag gagagtgtct tccttcttcc cacaggttta caatgcttgt
     2401 aggtttgtga caattcctca gtatggtgtc aacatgtagc cttagcataa catcagccac
     2461 cagagtgccg ccttcagaaa actttatgta aattgttttt gtataagaat aataaagaaa
     2521 tttggggtaa gtgttcgtat tattaaaaga ctttaaactc atggaagt
//
