LOCUS       NM_029875               3508 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus solute carrier family 35, member E3 (Slc35e3), mRNA.
ACCESSION   NM_029875
VERSION     NM_029875.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3508)
  AUTHORS   Tang,T., Li,L., Tang,J., Li,Y., Lin,W.Y., Martin,F., Grant,D.,
            Solloway,M., Parker,L., Ye,W., Forrest,W., Ghilardi,N., Oravecz,T.,
            Platt,K.A., Rice,D.S., Hansen,G.M., Abuin,A., Eberhart,D.E.,
            Godowski,P., Holt,K.H., Peterson,A., Zambrowicz,B.P. and de
            Sauvage,F.J.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC057101.1.
            
            On Oct 3, 2003 this sequence version replaced NM_029875.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC057101.1, SRR1660817.277677.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 66.32 cM"
     gene            1..3508
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /note="solute carrier family 35, member E3"
                     /db_xref="GeneID:215436"
                     /db_xref="MGI:MGI:2448489"
     exon            1..574
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             173..1114
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /codon_start=1
                     /product="solute carrier family 35 member E3"
                     /protein_id="NP_084151.2"
                     /db_xref="CCDS:CCDS24195.1"
                     /db_xref="GeneID:215436"
                     /db_xref="MGI:MGI:2448489"
                     /translation="MASLADRVRGNGRIAAGLLFNLLVSICIVFLNKWIYVHHGFPNM
                     SLTLVHFVVTWLGLYICQKLNIFAPKSLPLSKLLLLALSFCGFVVFTNLSLQNNTIGT
                     YQLAKAMTTPVIIAIQTFWYQKRFSVRIQLTLIPITVGVILNSYYDVKFHSLGMVFAA
                     LGVVVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAVPFFEPVFAEGGIFGP
                     WSVSALLMVLLSGIIAFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLCGGYILFKDPL
                     SVNQGLGILCTLFGILTYTHFKLSEQEGSKSKLVQRP"
     exon            575..685
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            686..844
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            845..927
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            928..3483
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2978..2983
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /note="hexamer: ACTAAA"
     polyA_site      2999
                     /gene="Slc35e3"
                     /gene_synonym="9330166G04Rik"
                     /note="major polyA site"
ORIGIN      
        1 agcgaccggg acccggctgg cgcatgcctg tctccggccg gaccgtggag cgggcggctg
       61 cgggcgcgcg gcggcggaga gccgggacag cgggagagcg tccgagcgcc ccgcggggag
      121 gctggacagc ccgggctcgg ccgaggacgc tgctccgcag ccggcgggca tcatggcatc
      181 gctggcggac cgggtccggg gcaacgggcg catcgccgcc gggctcctgt tcaacctgct
      241 ggtgtccatc tgcatcgtgt tcctcaacaa atggatctat gtacaccacg gcttccccaa
      301 catgagcctg accctggtgc acttcgtggt cacctggctg ggcttgtaca tctgccagaa
      361 actgaacatc tttgccccca aaagtctgcc gctctccaag ctcctcctcc tggccctcag
      421 cttctgtggc tttgtggtct tcaccaacct ttctctgcag aacaacacca taggcaccta
      481 tcagctggcc aaggccatga ccacgccggt gatcatagcc atccaaacct tctggtacca
      541 gaagagattc tccgtcagaa tacagctcac gctgattcct attactgtag gtgtaatcct
      601 aaattcttat tacgatgtga agtttcattc gcttggaatg gtgtttgccg cccttggtgt
      661 ggtagtcacg tccctttatc aagtgtgggt cggagccaag cagcacgaac tgcaggtgaa
      721 ctccatgcag ctactttact accaggcccc catgtcttct gccatgctgc tggtggctgt
      781 gcccttcttc gagccagtgt ttgcagaggg aggaatattt ggtccctggt cagtttctgc
      841 tttgcttatg gtactgctgt ctggaataat cgctttcatg gtgaacttat cgatttactg
      901 gatcattggg aacacgtcac cagtcaccta caacatgttc ggacacttca agttctgcat
      961 cactctctgc ggaggataca ttctatttaa ggaccccctg tcggtaaacc agggactcgg
     1021 catcctatgc acgctcttcg gtatcctcac ctacacccac tttaaactca gcgagcagga
     1081 aggcagtaag agtaagctgg tccaacggcc ctgagctttg gcagagaaga gaaaggcgaa
     1141 tcatgaggat gagaagcgac aaacgtgtgc gtcgtctatg gaaaagctcc ccgtggaatt
     1201 tagtcagtga cgtacaagaa gtattttctt tgcagataat gacaattttt agtacctttt
     1261 atcgatttaa tttttaaaaa ccaaaatggt tcattcaggc ttctcaaaga cttaatggac
     1321 ctggagctgg cactcggtag tagagtgttt gcctcacacg cgtgagaccc tggcctcaaa
     1381 ctccagcacc gtcaaagaaa tgctagcaac tgcctagaag atggcttcat cctgccagct
     1441 gaagcacggg agagttcggc tccataggaa tgacagagcg ctccttcgct gcagctgtgc
     1501 cgtggctgtc ggtgtccagt gtccctgttc tcccaggaag ggcaagccaa cctgctggct
     1561 cacccaggcc ttcctgtcgg gaagttgaag ttctttctcg ttcggacagg gtggtggtca
     1621 gagttgtatt gagactggat ctcactgtgt cgctctgact ggtctggaat tctctacata
     1681 gcccaaactg gctttggact ctaccactcc atgtagcctt tagctttctg atttcactgc
     1741 agaactgaaa cgtttataga aaggaagctg tcatcgacat gctcatgaaa ccaattacat
     1801 ctctgaaagt atcacctttt cagtagaaac ttaatctaag acattcttcc ctgttagaca
     1861 gggcaggagt gcttgagccc aaagcccgct cagcagcaca gctctgcccg tgctagaggg
     1921 agcgtctgca gactgacagt ctcattggtc ttctcgcggc tttgggcttt gagtgagttc
     1981 tagatactat atatggagtt acaggaaaac ccatctttaa acggctcaaa gcaaagctgt
     2041 agagggccag caggtagagc cagtaaccgg gtccctgccc agcactcata ggtgggttcg
     2101 cagtcgtcct ggtaactgct tccccagctt gcttaatcct ttcatcccag tgttttctga
     2161 tgtggcctcc ctcctgtact ccctgcctcc cacatcctga gcagtagata aggagcgttg
     2221 tatgtattgg aaaaactgga ctgaaccagg ccttgcagtt tatgtggcaa atcagagcaa
     2281 aggctgccca agttctaggc agaaacttgg tgaaaaacag gaaagatatg aaagacaggt
     2341 agaaaactag ctaatattta gctacttgta tgaggttcca gaggaattga gaaatgtttt
     2401 tagttgagat gtagacagaa tacatggggc tccagcaaat agagccctgg gtatttaact
     2461 gcaaaagtgt gtgtctgcct tcaggtatct tgtcgttttg ccattcacag cagccgctga
     2521 tgaccgcaga agagtcgggt ctcttggaat aataactttt tctaagcata cacttcctgt
     2581 gagaaagcag cttaagacaa agagacgtgt cttgtgataa tacatcttat ctggaatttt
     2641 cttcttcaca ggaagaggta acttttaata tattaggatt ttttgttggt agtggtagtt
     2701 tttaggtttt tttttttttt aaccaaataa aaaagcctgg gttgtatccc cagcactgcc
     2761 aaaacaaagc cttttcaagt catcaggcca caggagtgct gagctcgagg agaagacaca
     2821 cccctaggtc tcaaggttgg gcagtgagtc agggctacga gttccttggc cgtgtagacc
     2881 gcacagactt ccagggcagc ccaaatcaca tactgagttc tgttaagggg aaaggaaggg
     2941 tgcctggtct aggacttttt ttttttttcc tggcctcact aaatgtgtat tttggagaat
     3001 ggcattgtct gctgtgtatc agtccatgtg cttccgtggg tctttgtttt aaatattgtc
     3061 ctcagtttac agagttgtgt tattatgcca agaactgcag aacatgccgt cttcaccatc
     3121 atggaccttt ggaatcatgc tcaagaaaca ttttctgtgt atgtttaatg tttaacagtt
     3181 tcccagaagc taacggaaag tcttccagca cagagagcct caggtttctg tgcattagga
     3241 acaacggagt tgatttgtac tgcgtacaaa tcctagctgt agataagccc tggggaccgg
     3301 agttgatttg tactgcgtac aaatcctagc tgtagataag ccctggggac cggggtggtt
     3361 tgaataggta ggtgggtggg gtatgataag tggctggtgt cagtaggaat gagggacaga
     3421 gtgggagtat ggtgaatcaa ggcgtgttta tatacgtgaa taaactctct actattagaa
     3481 ccaaaaaaaa aaaaaaaaaa aaaaaaaa
//
