LOCUS       NM_001357105            1860 bp    mRNA    linear   ROD 31-JUL-2024
DEFINITION  Mus musculus solute carrier family 35, member B2 (Slc35b2), mRNA.
ACCESSION   NM_001357105 XM_006524996
VERSION     NM_001357105.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Sasaki,N., Hirano,T., Ichimiya,T., Wakao,M., Hirano,K.,
            Kinoshita-Toyoda,A., Toyoda,H., Suda,Y. and Nishihara,S.
  TITLE     The 3'-phosphoadenosine 5'-phosphosulfate transporters, PAPST1 and
            2, contribute to the maintenance and differentiation of mouse
            embryonic stem cells
  JOURNAL   PLoS One 4 (12), e8262 (2009)
   PUBMED   20011239
  REMARK    GeneRIF: PAPST-dependent sulfation of heparan sulfate or
            chondroitin sulfate chains regulates the extrinsic signaling
            required for the maintenance and normal differentiation of mouse
            embryonic stem cells.[PAPST1, PAPST2]
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1860)
  AUTHORS   Taniwaki,T., Haruna,K., Nakamura,H., Sekimoto,T., Oike,Y.,
            Imaizumi,T., Saito,F., Muta,M., Soejima,Y., Utoh,A., Nakagata,N.,
            Araki,M., Yamamura,K. and Araki,K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   4  (bases 1 to 1860)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   5  (bases 1 to 1860)
  AUTHORS   Araki,K., Imaizumi,T., Sekimoto,T., Yoshinobu,K., Yoshimuta,J.,
            Akizuki,M., Miura,K., Araki,M. and Yamamura,K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB855705.1, BB871150.1, AK152362.1, AK144403.1 and AI842275.1.
            
            On Oct 19, 2017 this sequence version replaced XM_006524996.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK144403.1, AK155551.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 BB855705.1         2-4
            4-32                BB871150.1         2-30
            33-1022             AK152362.1         2-991
            1023-1842           AK144403.1         1014-1833
            1843-1860           AI842275.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 22.59 cM"
     gene            1..1860
                     /gene="Slc35b2"
                     /gene_synonym="1110003M08Rik; PAPST1; Slc35b1"
                     /note="solute carrier family 35, member B2"
                     /db_xref="GeneID:73836"
                     /db_xref="MGI:MGI:1921086"
     exon            1..133
                     /gene="Slc35b2"
                     /gene_synonym="1110003M08Rik; PAPST1; Slc35b1"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..1418
                     /gene="Slc35b2"
                     /gene_synonym="1110003M08Rik; PAPST1; Slc35b1"
                     /note="solute carrier family 35, member B1; PAPS
                     transporter 1"
                     /codon_start=1
                     /product="adenosine 3'-phospho 5'-phosphosulfate
                     transporter 1"
                     /protein_id="NP_001344034.1"
                     /db_xref="CCDS:CCDS37630.2"
                     /db_xref="GeneID:73836"
                     /db_xref="MGI:MGI:1921086"
                     /translation="MDARWWAVVVLATLPSLGAGGESPEAPPQSWTQLWLFRFLLNVA
                     GYASFMVPGYLLVQYLRRKNYLETGRGLCFPLVKACVFGNEPKAPDEVLLAPRTETAE
                     STPSWQVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQFLVLMNR
                     VLALVVAGLYCVLRKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKAS
                     KVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLLSSGPEPRSSPATTLSGLVLLA
                     GYIAFDSFTSNWQDALFAYKMSSVQMMFGVNLFSCLFTVGSLLEQGALLEGARFMGRH
                     SEFALHALLLSICSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSCLLYGHTVTV
                     VGGLGVAVVFTALLLRVYARGRKQRGKKAVPTEPPVQKV"
     exon            134..327
                     /gene="Slc35b2"
                     /gene_synonym="1110003M08Rik; PAPST1; Slc35b1"
                     /inference="alignment:Splign:2.1.0"
     exon            328..482
                     /gene="Slc35b2"
                     /gene_synonym="1110003M08Rik; PAPST1; Slc35b1"
                     /inference="alignment:Splign:2.1.0"
     exon            483..1843
                     /gene="Slc35b2"
                     /gene_synonym="1110003M08Rik; PAPST1; Slc35b1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcacttccg ctggctggct gactggctgg ctgctggagc gggcggcaga gggagcggag
       61 ggagcgcgcg gcccggggga ctcacattcc ccggtccccc ctccgcccca cgcggctggg
      121 ccatggacgc cagatggtgg gcagtagtgg tactcgccac actcccttcc ttgggagcag
      181 gtggagagtc acccgaagcc cctccgcagt cctggacaca gctgtggctc ttccgcttct
      241 tgttgaatgt agcgggctat gccagcttta tggtacctgg ctacctcctg gtgcagtact
      301 taagacggaa gaactacctg gagacaggca ggggtctctg cttccccctg gtgaaagcct
      361 gtgtgtttgg caatgagccc aaggctcctg atgaggttct cctggctccg cggacagaga
      421 cagcggaatc caccccgtct tggcaggtcc tgaagctggt cttctgtgcc tcgggtctcc
      481 aggtgtccta tctgacttgg ggcatactgc aggaaagagt gatgactggc agctacgggg
      541 ccacagccac atcaccagga gagcatttca cagactccca gtttctggtg ctgatgaacc
      601 gtgtgctggc gctggttgtg gcaggcctct actgtgtcct gcgcaagcag ccccgtcatg
      661 gtgcacccat gtaccggtac tcctttgcca gtctgtcaaa tgtgcttagc agctggtgcc
      721 agtatgaagc acttaagttc gtcagcttcc ctacccaggt gctggcgaag gcctccaagg
      781 tgatccctgt catgatgatg ggaaagctgg tgtcccggcg cagctatgaa cactgggaat
      841 acctgactgc cggcctcatc tccattggag tgagcatgtt tcttctatcc agtggaccag
      901 agcctagaag ctctccagcc accacactct ctggcttggt cctactggca ggctatattg
      961 ctttcgacag cttcacctca aattggcagg atgccctgtt tgcctataag atgtcatcgg
     1021 tgcagatgat gtttggggtc aatttattct cctgtctttt cacagtaggc tcactactgg
     1081 aacagggggc cctactggag ggggcacgct tcatggggcg gcacagtgag tttgcgctcc
     1141 atgctctcct cctctccatc tgctccgcct ttgggcagct cttcatcttc tacaccattg
     1201 gacaatttgg agctgctgtc ttcactatca tcatgactct acgccaggct attgccatcc
     1261 tcctctcctg cctcctctat ggccatactg tcactgtggt ggggggactg ggagtagctg
     1321 tggtcttcac tgccctccta ctcagagtct atgcccgggg ccggaagcag cggggaaaga
     1381 aggctgtgcc cactgagccc ccagtacaga aggtgtgagc agtgcagtaa agaccctcat
     1441 cttctgaggc actggctcag tatcagcata cagcagagga ttggagccct ggaggcagcc
     1501 tcttttgcct taagagcccc cacttcatgg aaatgacagc tgtgggtgtt tggttagagg
     1561 tgacccagag ctcctccccc aatctctgaa atcttgctgg tggccaagca aaccagcacc
     1621 agggctttgc tcatagcacg cacccttgag gctaccaggc accagctggg aagagaattg
     1681 tttacaggtc atgcagttcc cctaggggcc agtgagaatg gtgctgtgcc agaagggaca
     1741 aaggccccca gcccagttgg ggccccagtg ttcctaccca agttttggta cttggaaatg
     1801 tcaccttttg ctcttatttg attaaactgc agcagtgact ttgaaaaaaa aaaaaaaaaa
//
