LOCUS       NM_028756               4200 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus solute carrier family 35, member A5 (Slc35a5),
            transcript variant 1, mRNA.
ACCESSION   NM_028756
VERSION     NM_028756.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4200)
  AUTHORS   Buttitta,L., Tanaka,T.S., Chen,A.E., Ko,M.S. and Fan,C.M.
  TITLE     Microarray analysis of somitogenesis reveals novel targets of
            different WNT signaling pathways in the somitic mesoderm
  JOURNAL   Dev Biol 258 (1), 91-104 (2003)
   PUBMED   12781685
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ075331.1, AK003124.1 and AK033921.1.
            
            On Apr 15, 2009 this sequence version replaced NM_028756.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK033921.1, SRR1660821.16708.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-73                CJ075331.1         35-107
            74-2961             AK003124.1         2-2889
            2962-4034           AK033921.1         2931-4003
            4035-4200           AK033921.1         4005-4170
FEATURES             Location/Qualifiers
     source          1..4200
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 29.44 cM"
     gene            1..4200
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="solute carrier family 35, member A5"
                     /db_xref="GeneID:74102"
                     /db_xref="MGI:MGI:1921352"
     exon            1..292
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            293..478
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            479..577
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            578..711
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            712..779
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            780..1560
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1561..4200
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1698..1703
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="hexamer: GATAAA"
     polyA_site      1719
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="major polyA site"
     regulatory      2939..2944
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2962
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="major polyA site"
     regulatory      4133..4138
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      4152
                     /gene="Slc35a5"
                     /gene_synonym="1010001J06Rik; D16Ertd450e; D730043G07Rik"
                     /note="major polyA site"
ORIGIN      
        1 gaagcgctgg aatgagcgcg cctgcgcaat ggccgctcag gctgctcttc cctagcgggc
       61 ggctcttagc tttgtattcc agccctggaa ggcagcgtga gaagggttga tttttattgt
      121 tttttgtttg tttttgtttt tgttttttgt tttttgtcgc ctttgctccc ggctcatagt
      181 ttccccacca atgggccttc aaaacctact gctgctacta cgaacttagg cagtcactat
      241 gtcggctcta tgatgtccgt tcttgcacta gaaccttccc tgagcgactg aggtctgccg
      301 acggggctgc tcatgaaagt gatcttctta aggcaattaa aaacccgtgg aatggaaaga
      361 aaatgctcca ggcgccctgg gttaggccca ccaacgctgt acacattcct gctaggcatt
      421 atattcatta ctctaagttc aagtcgaatc ttactggtaa aatactctgc caatgaagag
      481 aacaagtatg actatctccc taccactgtg aacgtgtgct cagagctgat gaagctgatt
      541 ctctgtatac ttgtgtcact ctgtgttata aagaaagaag atcatcaaag tagacatttg
      601 agatgtactt cctggaagga attctcaagt ttcatgaagt ggtccattcc tgcctttctg
      661 tacttcctgg acaacttgat tgtcttctat gtgctgtcct atcttcagcc tgccatggct
      721 gttatcttct cgaattttag cattataaca acagctcttc tattcaggat agtgctgaag
      781 cggcatctga actggatcca gtgggcatcc ctcctgattc tgttcttgtc tatcgtggcc
      841 ctaacagcca gtaccaaaac gtcccagcat gaattggcag gacatggatt tcatcatgat
      901 gccttcttca ccccatctaa ttcctgcctt catttcagga gagactgttc cctaagagac
      961 aattgtacat cgaaggagtg gactttcagt gaagtccagt ggaacaccac agccagagtt
     1021 tttagtcaca tccgtttggg cttgggccac gttctgatta tagttcaatg ttttatttct
     1081 tcaatggcca atatctataa tgagaagatc ctgaaggagg ggacacagct cactgagagc
     1141 atcttcatac agaatagcaa gctttatttc tttggcattg tttttaatgg gctgaccctg
     1201 gtccttcaga gcagtaaccg tgaccagatt cagaactgtg ggttttttta tggccacaat
     1261 gcattttcag tagtccttat tttcgtgact gccttccagg gcctttcagt ggcttttatc
     1321 ttgaaattct tagataacat gtttcatgtc ttgatggccc aggtgacaac tgtcatcatc
     1381 acaacagtgt ccgtcctggt ctttgacttc aggccctccc tggatttttt cctagaagcc
     1441 ccatcagttc tcctctccat atttatttat aatgctagca agcctcaaaa tctagagtgt
     1501 gcacctaagc aagaaagaat ccgccatctg agtggcagtc tttgggagcg ttccagtggg
     1561 gatggagaag agctggaaag acttaccaaa ctcaagagtg atgactcaga tgacgacact
     1621 ttataatggt acctggttgg tggacaactc acacaaactg tgtttgcaca ttttcaattg
     1681 tggcaattgt cttttctgat aaagtgatga tgtttgaaag catagtattc tttacatgta
     1741 tctaaccact gaataaacaa ctccatctaa gacctatagc agccacaggg tggcagagtt
     1801 ctgagaccta aacatagaac tctctgcata actgactacc tgatgagtca acaggacact
     1861 atgcagattg tttcttcagc ctccagggtc cagaaatcat gttaatttga ccctacagtt
     1921 acacaaatgg agatagcgtg ccagatacta atcatcgtgt catatcatct gcctgccaag
     1981 gtcatctctc tcgctctgtc attgttatat catcctgcct gtccctcaga tttcgaggcc
     2041 ttagcaatag tcgttttgct tttattaaag caataacact ctaaaagttt tggctgaaag
     2101 acctaagtat ctggctgtgc catagatttt aaataacatc ctttgtgata aatattttta
     2161 agctattaag aaataaaatt tcaaattttt atttgttttt ttaaatcatc ttttttttaa
     2221 agctttattt acatgaaagt tggttgccat gttatcatac ttagcacttg tattttaatt
     2281 cacctaagcc attgtagaat tgtttgtttg tttgtttgtt tgctctatcc ttggtttgta
     2341 catttacaaa atcttgacat cattaccttt tgatgttgag ttactgtgct gagaattcag
     2401 ttgatttatt tttgagttat taattgagct gtagaattgt tacctatctt tgtgtaatat
     2461 cctattctga aagtcaagtc tctggcttta ggatgccttt ataagaatta ttttgtaaaa
     2521 aaaaaaaata ataataatga cttttaatga aatagagtag tgttactcca agagggccag
     2581 taaccagaaa gtcacctctc aacaacactt cctacttaga agtgcatggt atttctcaag
     2641 acaagtttgc atgcagccag gtgattcttc attggtacag cagtcatgtg gcagataatt
     2701 ataatgtaag aaaatagagt gatttgttcc aggtcttata gctgaagggt agtagaaaca
     2761 agcttcaagc ctgtgtgttt acaaattcct acactgtaaa tatgaattat aagctaacat
     2821 gaagtttgca cattccttct tcaagtttcc atgtatttat atataagata ttactattat
     2881 tataatccat ctgtctaccc agaataatat aactgttaat aattgctaaa aatttttaat
     2941 taaaataatt actaaactct tattttgaat ctgtactatg tcatatgaga tgtggtgtgg
     3001 aacaacttaa aacttggtct ttgactcaat tttgatgtct aaagaatggt taaattctct
     3061 accttattgt aggaattctc accagagtcg catgaaatgg gattaaccaa tgtgattcat
     3121 tttaaagata aagaaaataa gatagagagc actcactttt agaaatgaga gcatgaaaat
     3181 tatcttactg agcttcagaa gaaattgcaa gtatcaccta caggatactt agtatagcaa
     3241 tcatttgtat cagtggtgtg gagtcatttg atttttcttg tctacagtta ttttttgcat
     3301 tcttacttct ttggaaaaca tttattgctc accatcgtgt taactagcca ctccctaaaa
     3361 gggctgagct gaaaataaaa tgtcagagag atgcacttgg ttattttaga agcattatta
     3421 ttttatgaag gacaatgtga aggtaagagg tccagaacca tttcccaggt actaatggag
     3481 tgggaattgt atgacctaaa aagttgtccc acagaaaaag gaatagacac agtaatcgtg
     3541 acatggttcc tactccagga actaaatggc agtgaggtag cagggcgact cttattcata
     3601 cacataggct agagatccca acaggttgta tttctcagca ttgggcaagg aaacaagaat
     3661 gtggatactg gttgtgacag ggaaagtggc ttagacctag atcccaatcc tttccctagc
     3721 tgctgcttgc cccgttttca agcacggtgt actgaatggc ccagtcagag catatttgct
     3781 cggcttacag ctaacattat tttcttgttt cactctgaat ttccatgtgg aagccctgtt
     3841 gcttgggagg tagctattgt ggctttgtta ctgctaatgt tgctgtaatc ctttctctct
     3901 acataagcca gctggctgga tgtgcccaga tcctccttgg taccctgtcc cttttcctac
     3961 aatgattttt ctatgagctc ttaacattcc aagcagagaa ggctgagcat agtggtaaga
     4021 gggtgatttt ctctctcaaa gcctagatca gagttcttga aattgagtga tatatttcca
     4081 cttttaatga agaaaacatt tgatacaagt ttcaacgtga atttttactc ttattaaagt
     4141 acatccaaac aatgtgattt gtgaacttat tttttcaata cagattttca ttgtgttctg
//
