LOCUS       NM_026404               2861 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus solute carrier family 35, member A4 (Slc35a4),
            transcript variant 1, mRNA.
ACCESSION   NM_026404
VERSION     NM_026404.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2861)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY088803.1, BY732053.1, AK145812.1 and BP765876.1.
            
            [WARNING] On Aug 3, 2024 this sequence was replaced by NM_026404.3.
            
            On Mar 23, 2007 this sequence version replaced NM_026404.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC006050.1, AK145812.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-22                BY088803.1         1-22
            23-377              BY732053.1         2-356
            378-2839            AK145812.1         2-2463
            2840-2861           BP765876.1         1-22                c
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 19.46 cM"
     gene            1..2861
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /note="solute carrier family 35, member A4"
                     /db_xref="GeneID:67843"
                     /db_xref="MGI:MGI:1915093"
     exon            1..409
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            410..508
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            509..2843
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             1100..2074
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /codon_start=1
                     /product="probable UDP-sugar transporter protein SLC35A4"
                     /protein_id="NP_080680.2"
                     /db_xref="CCDS:CCDS29158.1"
                     /db_xref="GeneID:67843"
                     /db_xref="MGI:MGI:1915093"
                     /translation="MSVEDGGVPGLARPRQARWTLLLFLSTAMYGAHAPFLALCHVDG
                     RVPFRPSSAVLLTELTKLLLCAFSLLVGWQTWPQGTPPWRQAVPFALSALLYGANNNL
                     VIYLQRYMDPSTYQVLSNLKIGSTALLYCLCLGHRLSARQGLALLLLMAAGACYASGG
                     FQEPVNTLPGPASAAGAHPMPLHITPLGLLLLILYCLISGLSSVYTELIMKRQRLPLA
                     LQNLFLYTFGVILNFGLYAGSGPGPGFLEGFSGWAVLVVLNQAVNGLLMSAVMKHGSS
                     ITRLFIVSCSLVVNAVLSAVLLQLQLTAIFFLAALLIGLAVCLYYGSP"
     regulatory      2801..2806
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2841
                     /gene="Slc35a4"
                     /gene_synonym="2610030J16Rik"
                     /note="major polyA site"
ORIGIN      
        1 tgctttcccg agtcctcgcg tgtttcggta cgtgctgtcc tacgaagcgt actgacacta
       61 cgaactccgc acaggttagt aactatgagt tcctcggacg gcggaagccg ggcgaggaga
      121 tcctgcacac ggtgcaccag ggggcgaatg agatcatcgc gtggagcatg agatcatcac
      181 gttccgacct ttacccgtgc gcgcacacgg caaaagatca gatggggagc aaggttgctg
      241 ccttaaatgc cacagccgtc accaaaaacg ccccgccttc ctccccaccc cacccccacc
      301 cctcgaaatg ccccggaagt gcctctaaaa ttggaagtag cctttgccct gaggaggcgg
      361 ggctgcgcgt gcgcaacaag ttcggcgggg aaagatggcg gatgacaagg attctctgcc
      421 caagcttaag gacctgacat ttctcaagaa ccagctggag cgcctacagc agcgtgtgga
      481 aggtgaagtc aacagtggcg taggccagga tggctccctc ttgtcctccc cattcttcaa
      541 gggcttcctg gcaggatacg tggtggccaa actgagggca tcagcagtat tgggctttgc
      601 ggtgggcact tgcactggca tctatgcagc tcaggcatat gccgtaccca acgtggagaa
      661 ggcactgaag aactacttta ggtcactacg gaaggggcct gactagaccc tttggggaaa
      721 gcaggacgag catgttgggc ctgcaggtag agccctttct atcacagaca ctctatctgg
      781 cttcccctgc tattattgtt catgtgctaa ctccgtctat tctgcctctt tcatccctgc
      841 ctttcttcct gcagagagtg gacagtgctt tgtcagcctg caccccagac tccttccctc
      901 cctagttcca tgggactgac cccaaaacta tgggccatta atcccctctt gaagacctaa
      961 ctggaatgtg cggctgtctc tgatcctcag tattctctct ggtgatgtac cacagttcta
     1021 tactcaatct cctacaaatg tgtcccagcc cctctgtccc ttgctagcta cccaggccac
     1081 ctagggtctg gtgtgggcca tgagtgtaga agatgggggc gtgccaggcc tagcccgccc
     1141 aagacaggct cgctggaccc tgttgctctt cctgtccact gccatgtatg gtgcccatgc
     1201 accgttctta gcactgtgcc atgtggatgg ccgagtgccc ttccggccct cctcagctgt
     1261 gttactcact gagctgacca agctcctgtt gtgcgccttc tccctcctgg taggctggca
     1321 aacatggccc cagggcacgc caccctggcg ccaggctgtg ccttttgcac tgtcagccct
     1381 gctctatggc gccaacaaca acctggtgat ttatctgcag cgctacatgg accccagcac
     1441 ctatcaggtg ctgagcaatc tcaagattgg aagcacagct ctattgtact gcctctgcct
     1501 tgggcatcgt ctctctgcgc gtcagggctt ggcgctgctg ctgctgatgg ctgcaggagc
     1561 ctgctatgca tcaggtggct ttcaggaacc tgtgaacacc cttcctgggc ccgcgtcagc
     1621 agctggagcc catcccatgc ccttgcatat cactccactg ggacttctgc tcctcatcct
     1681 atactgcctc atctccggct tgtcctccgt gtacacagag ctgatcatga agcgacagcg
     1741 gttgcccttg gctcttcaga acctcttcct ctacactttt ggggtgatcc tgaactttgg
     1801 actgtatgct ggcagtggcc caggcccggg cttcctggag ggcttctctg gatgggcagt
     1861 gcttgtggtg ctgaaccaag cagtcaatgg gctgctcatg tcggctgtca tgaagcatgg
     1921 cagcagcatc acacgcctct tcatcgtgtc ctgctcgctc gtggtcaacg ctgtgctgtc
     1981 ggcggtgctg ctccagctgc agctcacggc catcttcttc ctggccgcac tgctcatcgg
     2041 tctggctgtg tgcttgtact atggtagccc ctaagtcctt gaccacctcc actcacttgt
     2101 gactgtgtag attaaatgca accaccagag ttacctccca tccccctgta atccccagca
     2161 gccccgtaac aagtgccttg taagagaagc taaggtgtcc aggttagcct ttgcgtgttc
     2221 aggtgggaga gttaccccta ggaggcataa agagtgggct tggttaagga aacgcctaac
     2281 tgcactcctg aattctttca tactcaagag gtgggatccc caaacccagg cctgtccttg
     2341 aagatccctg ccttgtcctg catgtacatg gctgcttcaa gtgaagcttc agtcttctta
     2401 cctgctgtgg tcactcctga agactctgtc ccgaagtttg gtgctggctg ctccagccca
     2461 gcatgacttc catataaaga tgcttagttt gccccctcca cagagctgtt cccctcaccc
     2521 acctgttatt ctggaggggt cagaggaggc cagggcttga ctcatctcag ggaacattgg
     2581 ccctgggccc tggcttaagc ctacactcct gacccctgtg ctaactcgag agccctgttg
     2641 aagcctttcc ctctgaagca cttaggagct actgctcttt ccactctccg tggtgtcctc
     2701 gcttccaaca gctcgggagg gctctgcaga gtaaccaggg accaggtcca gaaaatgttt
     2761 atagccaatc agtgtctaac tacttcagca ataaggtctt aataaagtgt tctagggtgt
     2821 ggggtgcttc ctacaaccat gtaaaaaaaa aaaaaaaaaa a
//
