LOCUS       NM_011988               2301 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus solute carrier family 27 (fatty acid transporter),
            member 3 (Slc27a3), transcript variant 1, mRNA.
ACCESSION   NM_011988 XM_130954 XM_901506 XM_914241 XM_923127
VERSION     NM_011988.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Song,Z., Xiaoli,A.M., Li,Y., Siqin,G., Wu,T., Strich,R.,
            Pessin,J.E. and Yang,F.
  TITLE     The conserved Mediator subunit cyclin C (CCNC) is required for
            brown adipocyte development and lipid accumulation
  JOURNAL   Mol Metab 64, 101548 (2022)
   PUBMED   35863637
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Kappen,C., Kruger,C., Jones,S. and Salbaum,J.M.
  TITLE     Nutrient Transporter Gene Expression in the Early
            Conceptus-Implications From Two Mouse Models of Diabetic Pregnancy
  JOURNAL   Front Cell Dev Biol 10, 777844 (2022)
   PUBMED   35478964
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2301)
  AUTHORS   Mishima,T., Miner,J.H., Morizane,M., Stahl,A. and Sadovsky,Y.
  TITLE     The expression and function of fatty acid transport protein-2 and
            -4 in the murine placenta
  JOURNAL   PLoS One 6 (10), e25865 (2011)
   PUBMED   22028793
REFERENCE   4  (bases 1 to 2301)
  AUTHORS   Han,L.Q., Li,H.J., Wang,Y.Y., Zhu,H.S., Wang,L.F., Guo,Y.J.,
            Lu,W.F., Wang,Y.L. and Yang,G.Y.
  TITLE     mRNA abundance and expression of SLC27A, ACC, SCD, FADS, LPIN,
            INSIG, and PPARGC1 gene isoforms in mouse mammary glands during the
            lactation cycle
  JOURNAL   Genet Mol Res 9 (2), 1250-1257 (2010)
   PUBMED   20603810
  REMARK    GeneRIF: analysis of mRNA abundance and expression of SLC27A, ACC,
            SCD, FADS, LPIN, INSIG, and PPARGC1 gene isoforms in mouse mammary
            glands during the lactation cycle
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2301)
  AUTHORS   Schaiff,W.T., Knapp,F.F. Jr., Barak,Y., Biron-Shental,T.,
            Nelson,D.M. and Sadovsky,Y.
  TITLE     Ligand-activated peroxisome proliferator activated receptor gamma
            alters placental morphology and placental fatty acid uptake in mice
  JOURNAL   Endocrinology 148 (8), 3625-3634 (2007)
   PUBMED   17463056
REFERENCE   6  (bases 1 to 2301)
  AUTHORS   Schmuth,M., Ortegon,A.M., Mao-Qiang,M., Elias,P.M., Feingold,K.R.
            and Stahl,A.
  TITLE     Differential expression of fatty acid transport proteins in
            epidermis and skin appendages
  JOURNAL   J Invest Dermatol 125 (6), 1174-1181 (2005)
   PUBMED   16354187
REFERENCE   7  (bases 1 to 2301)
  AUTHORS   Pei,Z., Fraisl,P., Berger,J., Jia,Z., Forss-Petter,S. and
            Watkins,P.A.
  TITLE     Mouse very long-chain Acyl-CoA synthetase 3/fatty acid transport
            protein 3 catalyzes fatty acid activation but not fatty acid
            transport in MA-10 cells
  JOURNAL   J Biol Chem 279 (52), 54454-54462 (2004)
   PUBMED   15469937
  REMARK    GeneRIF: studies cast doubt on the designation of very long-chain
            acyl-CoA synthetase 3 (ACSVL3) as a fatty acid transport protein
REFERENCE   8  (bases 1 to 2301)
  AUTHORS   Jia,Z., Pei,Z., Li,Y., Wei,L., Smith,K.D. and Watkins,P.A.
  TITLE     X-linked adrenoleukodystrophy: role of very long-chain acyl-CoA
            synthetases
  JOURNAL   Mol Genet Metab 83 (1-2), 117-127 (2004)
   PUBMED   15464426
REFERENCE   9  (bases 1 to 2301)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Kitamura,H., Nakagawa,T., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of FLJ
            genes: the complete nucleotide sequences of 110 mouse
            FLJ-homologous cDnas identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (2), 127-135 (2004)
   PUBMED   15449545
REFERENCE   10 (bases 1 to 2301)
  AUTHORS   Hirsch,D., Stahl,A. and Lodish,H.F.
  TITLE     A family of fatty acid transporters conserved from mycobacterium to
            man
  JOURNAL   Proc Natl Acad Sci U S A 95 (15), 8625-8629 (1998)
   PUBMED   9671728
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC145082.10.
            
            On Jan 23, 2023 this sequence version replaced NM_011988.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ577573.1, BC141134.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-798               AC145082.10        84041-84838         c
            799-1008            AC145082.10        83559-83768         c
            1009-1167           AC145082.10        83197-83355         c
            1168-1292           AC145082.10        82505-82629         c
            1293-1487           AC145082.10        82124-82318         c
            1488-1578           AC145082.10        81933-82023         c
            1579-1777           AC145082.10        81617-81815         c
            1778-1875           AC145082.10        81349-81446         c
            1876-2006           AC145082.10        81119-81249         c
            2007-2301           AC145082.10        80108-80402         c
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 39.22 cM"
     gene            1..2301
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /note="solute carrier family 27 (fatty acid transporter),
                     member 3"
                     /db_xref="GeneID:26568"
                     /db_xref="MGI:MGI:1347358"
     exon            1..798
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            799..1008
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1009..1167
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1292
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1293..1487
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1488..1578
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1579..1777
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1778..1875
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1876..2006
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     exon            2007..2301
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2283..2288
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /note="hexamer: AATAAA"
     polyA_site      2301
                     /gene="Slc27a3"
                     /gene_synonym="Acsvl3; FATP-3; FATP3; Vlcs-3"
                     /note="major polyA site"
ORIGIN      
        1 actcctggct cccgcgccac accgcagaag ctgggtggga agggcgggtg ccagcgcacg
       61 cgcgccacgt tcccgggaag aaaggttgtc cgagccggac caaagctggc ttagtgtttc
      121 aggaaggacc acctggagtg tgtgtgagct gctgggacgg actagaggaa aagggcacca
      181 tggcggccct cctgctgctg ctgcccttac tcttgctcct gcctctgctg ctgaagctag
      241 acgtctggcc tcagctgcgc tggctgccgg ccgacctggc cttcacagtt cgcgccctcc
      301 gctgcaaaag ggcccttcga gcacgcgcgc tggccgcagc ggccgccgac cccgaaagct
      361 ctgagagcgg gtgcagtctg gcctggcgtc tcgcgtacct ggcccgggag cagccgacac
      421 acaccttcct catccacggc gcgcagcgct ttagctacgc ggaggctgag cgcgagagca
      481 accggattgc tcgcgccttt ctgcgcgcac ggggctggac cgggggccgc cgaggctcgg
      541 gcaggggcag cactgaggaa ggcgcacgcg tggcgcctcc ggctggagat gcggctgcta
      601 gagggacgac cgcgccccct ctggcacccg gggcgaccgt ggcgctgctc ctcccagcgg
      661 gcccggattt cctttggatt tggttcggac tggccaaagc tggcctgcgc acggcctttg
      721 tgcccaccgc tttacgccga ggacccctgc tgcactgcct ccgcagctgc ggtgcgagtg
      781 cgctcgtgct ggccacagag ttcctggagt ccctggagcc ggacctgccg gccttgagag
      841 ccatggggct ccacctatgg gcgacgggcc ctgaaactaa tgtagctgga atcagcaatt
      901 tgctatcgga agcagcagac caagtggatg agccagtgcc ggggtacctc tctgcccccc
      961 agaacataat ggacacctgc ctgtacatct tcacctctgg cactactggc ctgcccaagg
     1021 ctgctcgaat cagtcatctg aaggttctac agtgccaggg attctaccat ctgtgtggag
     1081 tccaccagga ggacgtgatc tacctcgcac tcccactgta ccacatgtct ggctcccttc
     1141 tgggcattgt gggctgcttg ggcattgggg ccaccgtggt gctgaaaccc aagttctcag
     1201 ctagccagtt ctgggacgat tgccagaaac acagggtgac agtgttccag tacattgggg
     1261 agttgtgccg atacctcgtc aaccagcccc cgagcaaggc agagtgtgac cataaggtgc
     1321 gcttggcagt gggcagtggg ttgcgcccag acacctggga gcgtttcctg cggcgatttg
     1381 gacctctgca gatactggag acgtatggca tgacagaggg caacgtagct acgttcaatt
     1441 acacaggacg gcagggtgca gtggggcgag cttcctggct ttacaagcac atcttcccct
     1501 tctccttgat tcgatacgat gtcatgacag gggagcctat tcggaatgcc caggggcact
     1561 gcatgaccac atctccaggt gagccaggcc tactggtggc cccagtgagc cagcagtccc
     1621 ccttcctggg ctatgctggg gctccggagc tggccaagga caagctgctg aaggatgtct
     1681 tctggtctgg ggacgttttc ttcaatactg gggacctctt ggtctgtgat gagcaaggct
     1741 ttcttcactt ccacgatcgt actggagaca ccttcaggtg gaagggagag aatgtggcca
     1801 caactgaagt ggctgaggtc ttggagaccc tggacttcct tcaggaggtg aacatctatg
     1861 gagtcacggt gccagggcac gaaggcaggg caggcatggc ggccttggct ctgcggcccc
     1921 cgcaggctct gaacctggtg cagctctaca gccatgtttc tgagaacttg ccaccgtatg
     1981 cccgacctcg gtttctcagg ctccaggaat ctttggccac tactgagacc ttcaaacagc
     2041 agaaggttag gatggccaat gagggctttg accccagtgt actgtctgac ccactctatg
     2101 ttctggacca agatataggg gcctacctgc ccctcacacc tgcccggtac agtgccctcc
     2161 tgtctggaga ccttcgaatc tgaaaccttc cacttgaggg aggggctcgg agggtacagg
     2221 ccaccatggc tgcaccaggg agggttttcg ggtatctttt gtatatggag tcattatttt
     2281 gtaataaaca gctggagctt a
//
