LOCUS       NM_181328               1964 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 25 (mitochondrial carrier,
            palmitoylcarnitine transporter), member 29 (Slc25a29), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_181328 NM_145408 XM_981272
VERSION     NM_181328.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1964)
  AUTHORS   Camacho,J.A. and Rioseco-Camacho,N.
  TITLE     The human and mouse SLC25A29 mitochondrial transporters rescue the
            deficient ornithine metabolism in fibroblasts of patients with the
            hyperornithinemia-hyperammonemia-homocitrullinuria (HHH) syndrome
  JOURNAL   Pediatr Res 66 (1), 35-41 (2009)
   PUBMED   19287344
  REMARK    GeneRIF: The human and mouse SLC25A29 mitochondrial ornithine
            transporters (designated as ORNT3) rescue the deficient ornithine
            metabolism in fibroblasts of patients with the
            hyperornithinemia-hyperammonemia-homocitrullinuria (HHH) syndrome.
REFERENCE   4  (bases 1 to 1964)
  AUTHORS   Bennett,B., Downing,C., Carosone-Link,P., Ponicsan,H., Ruf,C. and
            Johnson,T.E.
  TITLE     Quantitative trait locus mapping for acute functional tolerance to
            ethanol in the L x S recombinant inbred panel
  JOURNAL   Alcohol Clin Exp Res 31 (2), 200-208 (2007)
   PUBMED   17250610
REFERENCE   5  (bases 1 to 1964)
  AUTHORS   Sekoguchi,E., Sato,N., Yasui,A., Fukada,S., Nimura,Y.,
            Aburatani,H., Ikeda,K. and Matsuura,A.
  TITLE     A novel mitochondrial carnitine-acylcarnitine translocase induced
            by partial hepatectomy and fasting
  JOURNAL   J Biol Chem 278 (40), 38796-38802 (2003)
   PUBMED   12882971
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK047628.1.
            
            On Apr 6, 2007 this sequence version replaced NM_181328.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK047628.1, AK087057.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: reported by MitoCarta
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1964              AK047628.1         2-1965
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 59.62 cM"
     gene            1..1964
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /note="solute carrier family 25 (mitochondrial carrier,
                     palmitoylcarnitine transporter), member 29"
                     /db_xref="GeneID:214663"
                     /db_xref="MGI:MGI:2444911"
     exon            1..225
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /inference="alignment:Splign:2.1.0"
     CDS             192..1112
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /note="mitochondrial carnitine/acylcarnitine carrier
                     protein CACL; solute carrier family 25 member 29;
                     mitochondrial ornithine transporter 3;
                     carnitine/acylcarnitine translocase-like"
                     /codon_start=1
                     /product="mitochondrial basic amino acids transporter"
                     /protein_id="NP_851845.1"
                     /db_xref="CCDS:CCDS26164.1"
                     /db_xref="GeneID:214663"
                     /db_xref="MGI:MGI:2444911"
                     /translation="MALDFLAGCAGGVAGVIVGHPFDIVKVRLQVQSTEKPQYRGTLH
                     CFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGQDSPLNQFLAGAAA
                     GAIQCVICCPMELAKTRLQLQAVGPARTYKGSLDCLVQIYRHEGLRGINRGMVSTLLR
                     ETPSFGVYFLTYDVMTRAMGCEPGDRLLVPKLLLAGGTSGITSWLSTYPMDVVKSRLQ
                     ADGLQGTPRYRGIVDCMRQSYQAEGWQVFTRGLASTLLRAFPVNAATFATVTVVLTYT
                     RGEEAQVDSEAALGTSPTPAGSALAQPSSL"
     exon            226..269
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /inference="alignment:Splign:2.1.0"
     exon            270..353
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /inference="alignment:Splign:2.1.0"
     exon            354..1964
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1964
                     /gene="Slc25a29"
                     /gene_synonym="C030003J19Rik; CACL; mCACL"
                     /note="putative"
ORIGIN      
        1 ggggcggtgc gagcggtgcg aggtgaggcc cggcaagctg gacgccaggg gagtgctttt
       61 ctaggagtcg ccatccagtc gcctccccga cccggctgcg cgcccggagg ccagatagca
      121 ggagtcgcga cggccaaccg cgggccgggc ccgaggagta gtaagacaca gccggctcgc
      181 cgggccgggc catggcgctc gacttcctgg ctggatgcgc cggaggtgtg gcaggtgtga
      241 tcgtgggaca cccttttgac atagtcaagg tgcggctgca agttcagagc acagagaagc
      301 ctcagtacag agggacgctg cactgcttcc agtccatcat caagcaggag agtgtgctgg
      361 gcctgtataa aggcctgggc tcgccactaa tgggactcac cttcatcaat gcactggtgt
      421 ttggggtgca aggtaacacc ctccgggccc tgggccaaga ctcaccactc aatcagttcc
      481 tggccggtgc agcagcaggc gccattcagt gtgtcatctg ctgccccatg gaactggcca
      541 agacgaggct gcagctccag gccgtgggtc ctgcccgtac ctacaagggc tccctggact
      601 gcctggtgca gatttaccgg catgagggcc tgcgcggcat caatcgaggc atggtgtcca
      661 cacttctgcg ggagacgcca agctttggcg tctacttcct cacctatgat gtaatgaccc
      721 gcgccatggg ctgcgagcca ggtgaccgcc tgctggtgcc taagctgctg ctggcgggtg
      781 gcacgtcggg gatcacatcc tggctctcca cttatcccat ggacgtggtt aagtcacgac
      841 tgcaagccga cgggctacaa ggaacccctc gctaccgcgg catcgtcgac tgcatgcggc
      901 agagctacca ggccgagggc tggcaagtct tcacgcgagg gctggcctcc acgctgctcc
      961 gtgccttccc ggtcaatgct gccacctttg ccacagtcac tgtggtgctt acatataccc
     1021 ggggcgagga ggctcaggta gacagtgagg cagctctggg cacctctccc actcctgctg
     1081 ggtctgccct ggcccagcct tccagtctgt gatgcttgcc cagtgccact ttggtggaac
     1141 ttgacaacag agggtatggc tcctcagcca gtcttcctca ttggcctgtg atgacagctg
     1201 tctgtaccct actggccccc tatttcttag ccgtaaaatg gggactcctc ctcagacatg
     1261 gtacattcag gaaggtcaag cctcgctaag tctgccctat gcagacagaa ctgccagtca
     1321 gaatcttcca agcccagcac tccccggggt atcccctgag ccaactctta caggctggcc
     1381 aaggaaggac ccagccgttc ttcaaatcct ccatcaactg agtcccggga aaatctcggt
     1441 cattgttaca gtgagggaca gtgggtggca tgcaacgctc cctctccgtg ttgcagagtc
     1501 accctgcctc cgtgcctacc tagcttctcc tctgctgccc ttggagtgtg gagcagggct
     1561 gggaccctgg cactaagtcc gttgaggatc acgccagtgt agggtctggg tgggagcaga
     1621 caggccaccg gcctcaatgt ctccacaggg aaattgtgta gcagctgtcg caagacagag
     1681 tcttctcagc tctgagcctc gggctacctg tctgtaagac gggcacctgg ctcagctgat
     1741 gtctgactcg cttactgcca gccaggattc acactggtag gtaggcagag ggcccagaga
     1801 acgcaggaaa tgtggtcttt ctgggcactg tcagtgcctg tgcccgtgaa agcagaggtc
     1861 ttggcaccag cacagagttg ttgccagttt ggacctgcct gggcggggga aactgagctc
     1921 tggctggctc tactgtcctc taaaggaata aagtcttgtt ttct
//
