LOCUS       NM_194333               2077 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 23 (nucleobase transporters),
            member 3 (Slc23a3), mRNA.
ACCESSION   NM_194333
VERSION     NM_194333.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Guimaraes,M.J., Bazan,J.F., Zlotnik,A., Wiles,M.V., Grimaldi,J.C.,
            Lee,F. and McClanahan,T.
  TITLE     A new approach to the study of haematopoietic development in the
            yolk sac and embryoid bodies
  JOURNAL   Development 121 (10), 3335-3346 (1995)
   PUBMED   7588067
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ065822.1, BC094893.1 and BC117790.1.
            
            On Jan 26, 2007 this sequence version replaced NM_194333.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC094893.1, U25739.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 CJ065822.1         12-15
            5-814               BC094893.1         9-818
            815-1962            BC117790.1         802-1949
            1963-2077           BC094893.1         1966-2080
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 38.6 cM"
     gene            1..2077
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /note="solute carrier family 23 (nucleobase transporters),
                     member 3"
                     /db_xref="GeneID:22626"
                     /db_xref="MGI:MGI:104516"
     exon            1..206
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1871
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /note="YSPL-1; sodium-dependent vitamin C transporter 3;
                     Na(+)/L-ascorbic acid transporter 3; yolk sac
                     permease-like molecule 1"
                     /codon_start=1
                     /product="solute carrier family 23 member 3"
                     /protein_id="NP_919314.2"
                     /db_xref="CCDS:CCDS15062.1"
                     /db_xref="GeneID:22626"
                     /db_xref="MGI:MGI:104516"
                     /translation="MSRSPLHPIPLLSEGYQDTPAPLPPLLPPLQNPSSRSWASRVCG
                     PSTWGLSCLLALQHFLVLASLLWASHLLLLHGLPPGGLSYPPAQLLASSFFSCGLSTV
                     LQTWMGSRLPLIQAPSLEFLIPALVLTNQKLPLTTKTPGNASLSLPLCSLTRSCHGLE
                     LWNTSLREVSGAVVVSGLLQGTIGLLGVPGRVFPYCGPLVLAPSLVVAGLSAHKEVAQ
                     FCSAHWGLALLLILLMVVCSQHLGSCQIPLCSWRPSSTSTHICIPVFRLLSVLAPVAC
                     VWFISAFVGTSVIPLQLSEPSDAPWFWLPHPGEWEWPLLTPRALAAGISMALAASTSS
                     LGCYALCGQLLRLSPPPPHACSRGLSLEGLGSVLAGLLGSPLGTASSFPNVGTVSLFQ
                     TGSRRVAHLVGLFCMGLGLSPRLAQLFTSIPLPVLGGVLGVTQAVVLSAGFSSFHLAD
                     IDSGRNVFIVGFSIFMALLLPRWLREAPVLLNTGWSPLDMFLRSLLAEPIFLAGLLGF
                     LLENTISGTRAERGLGQRLPTSFTAQEIQMLQQSRRKAAQEYGLPLPIRNLCSCIPQP
                     LHCLCPMPEDSGDEGGSSKTGERADLLPNSGESYSTASREGVRSQ"
     exon            207..364
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            365..462
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            463..539
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            540..721
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            722..842
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            843..957
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1211
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1212..1317
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1485
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..1581
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1582..2059
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2035..2040
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /note="hexamer: AATAAA"
     polyA_site      2059
                     /gene="Slc23a3"
                     /gene_synonym="SVCT3; Yspl1"
                     /note="major polyA site"
ORIGIN      
        1 ctggggcagc caagacgcaa tcaagtcagg gcagcatgag ccgatcacct ctccatccca
       61 ttccacttct atctgagggc taccaggata cccctgctcc cctgccacca ctgctacccc
      121 ctctccagaa tccctcctcc cgttcttggg cctctcgggt gtgtgggcct tccacctggg
      181 ggctcagctg tcttctggct ctacagcatt tcctggtctt ggcatctttg ctctgggcct
      241 cccacctgct gctgcttcat ggtcttcccc caggagggct ctcataccca cccgctcagc
      301 tcctggcttc cagtttcttt tcatgtggcc tgtctacggt cctgcagact tggatgggca
      361 gcaggctacc tctaatccag gctccgtccc tagagtttct tatccccgca ctggtgctga
      421 caaaccagaa gctacctctg acgaccaaga cacctggaaa tgcctccctc tcactgcccc
      481 tgtgtagttt gacaagaagc tgccatggcc tggagctctg gaacacttct ctccgagagg
      541 tgtcgggggc agtggtggtg tccgggctgc tgcagggcac tataggactt ctaggggtgc
      601 ctggccgtgt gttcccctac tgtgggccac tggtgctggc tcccagcctg gttgtggcag
      661 ggctttctgc ccacaaggag gtggcccagt tctgttctgc tcactggggc ctggccttgc
      721 tgctcatcct gctcatggtg gtatgctctc agcacctggg ttcatgccag ataccccttt
      781 gctcctggag gccatcttca acttcaactc acatttgtat tcccgtcttc cgactccttt
      841 cggtgcttgc ccctgtggcc tgtgtgtggt tcatctctgc ctttgtgggt acgagtgtta
      901 tccctctgca gctgtctgag ccctcggatg caccttggtt ttggctgcca cacccaggtg
      961 agtgggaatg gcccttgctg acacccaggg ccctggctgc aggcatctcc atggctttgg
     1021 cagcctccac cagctccttg ggttgctatg ctctgtgtgg ccagctgctg cgtttgtctc
     1081 ctccgccacc tcatgcctgc agtcgagggc tgagcctgga ggggctgggc agtgtgctgg
     1141 cagggctgct ggggagcccc ctgggcactg catccagctt ccccaacgta ggcacagtga
     1201 gtctttttca gactggctct cggagagtgg cccacctagt ggggttgttc tgcatggggc
     1261 ttgggctctc cccaaggctg gctcagctat ttaccagcat cccactgcct gtgcttggtg
     1321 gggtactggg agtgacccag gctgtagttc tgtctgctgg attctccagc tttcacctgg
     1381 ctgacattga ctctgggcga aatgtcttca tcgtgggctt ctccatcttc atggccttgc
     1441 ttttgccaag gtggctcagg gaagccccag tcctgctcaa cacaggctgg agccccctgg
     1501 atatgtttct tcgttctttg ctggcagaac ccattttctt agctggtcta ctgggctttc
     1561 tcctagaaaa cactatatct ggtacacggg ctgagagagg cttaggtcag aggctgccaa
     1621 cttctttcac tgcccaagaa attcaaatgc ttcagcaatc caggaggaaa gctgctcaag
     1681 agtatgggct tcctttaccc atcagaaacc tgtgttcctg catcccacag cctctccact
     1741 gcctctgtcc aatgcctgaa gactctgggg atgaaggagg atcctctaaa acaggagaga
     1801 gagccgactt gttgcctaac tctggggaat cgtactccac agctagcaga gaaggggtta
     1861 ggtcccagta atcatcaaga ccaccatttt tgtcttagtt tagcagtaac tgccaccttg
     1921 ctggagtctg tatactttgt cccagtggag gtggatgtgg cccacttgca aaatgggctg
     1981 cctttcctcc tcttaagact tgagcagagg ccatggttta gcgggttgga actgaataaa
     2041 tgagatttct gcctgtaaaa aaaaaaaaaa aaaaaaa
//
