LOCUS       NM_133980               2021 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus solute carrier family 22 (organic cation transporter),
            member 13 (Slc22a13), mRNA.
ACCESSION   NM_133980 XM_913599
VERSION     NM_133980.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Shinoda,Y., Yamashiro,T., Hosooka,A., Yasujima,T. and Yuasa,H.
  TITLE     Functional characterization of human organic anion transporter 10
            (OAT10/SLC22A13) as an orotate transporter
  JOURNAL   Drug Metab Pharmacokinet 43, 100443 (2022)
   PUBMED   35144162
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Man,J.C.K., Mohan,R.A., Boogaard,M.V.D., Hilvering,C.R.E.,
            Jenkins,C., Wakker,V., Bianchi,V., Laat,W., Barnett,P.,
            Boukens,B.J. and Christoffels,V.M.
  TITLE     An enhancer cluster controls gene activity and topology of the
            SCN5A-SCN10A locus in vivo
  JOURNAL   Nat Commun 10 (1), 4943 (2019)
   PUBMED   31666509
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2021)
  AUTHORS   AbuAli,G., Chaisaklert,W., Stelloo,E., Pazarentzos,E., Hwang,M.S.,
            Qize,D., Harding,S.V., Al-Rubaish,A., Alzahrani,A.J., Al-Ali,A.,
            Sanders,T.A., Aboagye,E.O. and Grimm,S.
  TITLE     The anticancer gene ORCTL3 targets stearoyl-CoA desaturase-1 for
            tumour-specific apoptosis
  JOURNAL   Oncogene 34 (13), 1718-1728 (2015)
   PUBMED   24769897
REFERENCE   4  (bases 1 to 2021)
  AUTHORS   Willnow,T., Antignac,C., Brandli,A., Christensen,E., Cox,R.,
            Davidson,D., Davies,J., Devuyst,O., Eichele,G., Hastie,N.,
            Verroust,P., Schedl,A. and Meij,I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC055818.9, AF529220.1 and AI649135.1.
            
            On Mar 26, 2009 this sequence version replaced NM_133980.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            transcript and genomic sequence to make the sequence consistent
            with the reference genome assembly. The genomic coordinates used
            for the transcript record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF529220.1, BC021449.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-7                 AC055818.9         20894-20900
            8-1248              AF529220.1         1-1241
            1249-1249           AC055818.9         35255-35255
            1250-1375           AF529220.1         1243-1368
            1376-1376           AI649135.1         608-608             c
            1377-2021           AF529220.1         1370-2014
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 71.33 cM"
     gene            1..2021
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /note="solute carrier family 22 (organic cation
                     transporter), member 13"
                     /db_xref="GeneID:102570"
                     /db_xref="MGI:MGI:2143107"
     exon            1..423
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..1701
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /note="organic cation transporter-like 3; ORCTL-3; organic
                     anion transporter 10"
                     /codon_start=1
                     /product="solute carrier family 22 member 13"
                     /protein_id="NP_598741.2"
                     /db_xref="CCDS:CCDS40802.1"
                     /db_xref="GeneID:102570"
                     /db_xref="MGI:MGI:2143107"
                     /translation="MAQFAQVMAEVGDFGRFQVRLTILMGIPNFLAAFFIFGQVFMVL
                     DEAHHCSVSWVKNHTFNLSAAEQLAISIPNDTAGRPESCLMFRPPPDSASLEDILSHR
                     FNETQACDSGWDYPENRPQSLKKEFDLVCDRKNLKKTSQSVFMAGLLVGALVFGPVCD
                     WIGRRPSLLMQVLLSGITSMATAFVSSFELYLALRFVLATANAGFLLSTNVLISEWVG
                     PSWRTQAVVLAQSNVALGQMVLAGLAYGVRNWRLLQITGTAPVLLLFFYFWVLPESPR
                     WLLSQGRTEEAKQLVQKAALVNGRPLSPELLNQLVPEKTGPSGNALDLFRHPHLRKVT
                     LILIAVWFVDSLVYYSLSFQVGDFGLDIYVTQLIFGAVEMPGRFLSVLMMEKLGRKWS
                     QLCTLTLAGIMYIIIIFIPGDLPTVVTVLAVVGKFASAAAFTISYVYTAELFPTIIRQ
                     TGMGLVSIFSRVGGIITPLVMLLEQYHQAIPMVIFGSLPIGAGLLCALLPETRGQTLK
                     DTLQDLEQGLPAGSHKTAPQRQDMEALGRTSSVRVAVVKSSYF"
     exon            424..527
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            528..682
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            683..851
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            852..972
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1067
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1282
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            1283..1391
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1607
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
     exon            1608..2008
                     /gene="Slc22a13"
                     /gene_synonym="OAT10; OCTL1; OCTL3; ORCTL3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttatacctg tgtggtgttc ctagactcag gagtgagaag cagacatggc tcaatttgca
       61 caggtcatgg ctgaagtggg cgactttggt cgctttcagg tgcggttgac catcctgatg
      121 ggcattccca atttcctggc tgcattcttc atatttggcc aagtcttcat ggtccttgat
      181 gaggctcacc actgttcagt gtcctgggtt aagaaccaca ctttcaacct aagtgccgct
      241 gagcagctgg ctataagcat ccccaacgac acagcgggca gacccgagtc ctgcctcatg
      301 ttccggccac ctcctgacag tgccagcctg gaagacatcc tgagccaccg cttcaatgag
      361 acacaggcct gtgactcagg ctgggactat cctgagaacc ggcctcagtc cctaaagaaa
      421 gagtttgacc tggtgtgtga tcgaaagaac ctgaagaaga cctcccagtc ggtgttcatg
      481 gctggtctcc ttgttggggc cctggtcttt gggcctgtct gtgactggat tggccgcaga
      541 ccctccctcc tgatgcaggt gcttctgtca ggcatcacaa gcatggccac agccttcgtg
      601 tccagctttg agctctactt ggccctacgc tttgtcttgg ctactgccaa tgctggattt
      661 ttactaagta ccaatgtcct gatttcagag tgggtggggc catcttggag aacacaagcc
      721 gtggtcttgg cccagagcaa cgttgccctt gggcagatgg tgttagcagg actggcctat
      781 ggtgtccgaa actggagact ccttcagata acaggcaccg cacccgtctt actgctcttc
      841 ttctatttct gggttctgcc agaatctcca cggtggcttc tgtcccaagg aaggacagaa
      901 gaggccaaac aactggtcca gaaggcagcc ttggtgaacg gccggccact ttccccggag
      961 ctcctgaacc agctggtccc tgagaagaca ggcccctcgg ggaacgcctt ggaccttttc
     1021 agacaccctc acctcaggaa ggtgactctg attctcatag ctgtctggtt tgtggacagt
     1081 ctggtgtact acagcctcag cttccaagtg ggggactttg gcctggatat ctatgtgaca
     1141 cagctgatat ttggagcagt ggaaatgcct ggccgcttcc tcagtgtcct catgatggag
     1201 aagctgggtc gcaagtggag ccagctgtgt actctgactc tggctggcat catgtacatc
     1261 attatcatct tcatcccagg agatcttccc acggtggtca ctgtgctggc tgtggtgggg
     1321 aagtttgcct cggctgcggc cttcaccatc tcctatgtgt acactgctga gctcttcccc
     1381 accatcatca ggcaaacagg catggggttg gtgagcatct tctccagggt cggtggcatc
     1441 atcacacccc ttgtgatgct gctggaacag taccaccagg cgattcccat ggtcatcttt
     1501 ggcagcctcc ccattggagc aggcctactg tgcgctctgc ttcctgagac ccggggccag
     1561 accctgaagg acaccctcca ggacctggag caggggctcc ctgcagggtc ccacaaaaca
     1621 gcaccccaaa gacaagacat ggaggctttg ggaagaactt ccagtgtgag ggtggctgtt
     1681 gtgaagagct cgtacttctg actgtggctg ctgagggcca gcctatcaag agcagaggac
     1741 agcgcacatg gcatctgtag cacacaggat cagatcagcc gtgttcatgc tccctactcc
     1801 cttttgcaga gcccagaggg agtatcaggg acagtaccct tccctcttcc acacttctca
     1861 tacacaaact gcaccccagt accacggctg agtcagggtc gctctcagtc ttctccgaca
     1921 gtctctctgg ggttgtggcc tcaccagtct ccctgtctgg gataccccat cctcataaag
     1981 ataaaaaaaa ataaaacaaa acaaaaaaaa aaaaaaaaaa a
//
