LOCUS       NM_029736               3644 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus solute carrier family 10 (sodium/bile acid
            cotransporter family), member 7 (Slc10a7), transcript variant a,
            mRNA.
ACCESSION   NM_029736
VERSION     NM_029736.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3644)
  AUTHORS   Laugel-Haushalter,V., Bar,S., Schaefer,E., Stoetzel,C.,
            Geoffroy,V., Alembik,Y., Kharouf,N., Huckert,M., Hamm,P.,
            Hemmerle,J., Maniere,M.C., Friant,S., Dollfus,H. and Bloch-Zupan,A.
  TITLE     A New SLC10A7 Homozygous Missense Mutation Responsible for a Milder
            Phenotype of Skeletal Dysplasia With Amelogenesis Imperfecta
  JOURNAL   Front Genet 10, 504 (2019)
   PUBMED   31191616
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3644)
  AUTHORS   Dubail,J., Huber,C., Chantepie,S., Sonntag,S., Tuysuz,B., Mihci,E.,
            Gordon,C.T., Steichen-Gersdorf,E., Amiel,J., Nur,B.,
            Stolte-Dijkstra,I., van Eerde,A.M., van Gassen,K.L., Breugem,C.C.,
            Stegmann,A., Lekszas,C., Maroofian,R., Karimiani,E.G., Bruneel,A.,
            Seta,N., Munnich,A., Papy-Garcia,D., De La Dure-Molla,M. and
            Cormier-Daire,V.
  TITLE     SLC10A7 mutations cause a skeletal dysplasia with amelogenesis
            imperfecta mediated by GAG biosynthesis defects
  JOURNAL   Nat Commun 9 (1), 3087 (2018)
   PUBMED   30082715
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3644)
  AUTHORS   Brommage,R., Liu,J., Hansen,G.M., Kirkpatrick,L.L., Potter,D.G.,
            Sands,A.T., Zambrowicz,B., Powell,D.R. and Vogel,P.
  TITLE     High-throughput screening of mouse gene knockouts identifies
            established and novel skeletal phenotypes
  JOURNAL   Bone Res 2, 14034 (2014)
   PUBMED   26273529
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3644)
  AUTHORS   Godoy,J.R., Fernandes,C., Doring,B., Beuerlein,K., Petzinger,E. and
            Geyer,J.
  TITLE     Molecular and phylogenetic characterization of a novel putative
            membrane transporter (SLC10A7), conserved in vertebrates and
            bacteria
  JOURNAL   Eur J Cell Biol 86 (8), 445-460 (2007)
   PUBMED   17628207
  REMARK    GeneRIF: Molecular characterization and expression analysis of a
            novel member of the SLC10 family, SLC10A7, previously known as
            C4orf13, is reported
REFERENCE   5  (bases 1 to 3644)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC101757.12, AK152752.1 and AC139107.3.
            
            On Aug 18, 2013 this sequence version replaced NM_029736.1.
            
            Transcript Variant: This variant (a) represents the longest
            transcript and encodes the longest isoform (a).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK152752.1, AK152849.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-40                AC101757.12        88626-88665
            41-1883             AK152752.1         2-1844
            1884-3644           AC139107.3         4192-5952           c
FEATURES             Location/Qualifiers
     source          1..3644
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 37.04 cM"
     gene            1..3644
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /note="solute carrier family 10 (sodium/bile acid
                     cotransporter family), member 7"
                     /db_xref="GeneID:76775"
                     /db_xref="MGI:MGI:1924025"
     exon            1..347
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            348..430
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            431..567
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            568..643
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            644..682
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            683..718
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            719..802
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            803..968
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            969..1020
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1094
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1240
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     exon            1241..3644
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3614..3619
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /note="hexamer: ATTAAA"
     polyA_site      3637
                     /gene="Slc10a7"
                     /gene_synonym="2410193C02Rik; P7"
                     /note="major polyA site"
ORIGIN      
        1 gaggtgcgtg gtagtgatgg cggcgctcag cgaggctttc ctgtcactgg gtactactac
       61 tcccagcccg cctcggagcc gcccgagcca cccctcggtc tttagtttac gagtggcaat
      121 ttgacttgct ctgctgcatg tctggaggga tcgaggaaag tgtggagacg ccccggggat
      181 ttagggatcg cagtttggaa agcaagccag ccaaacaaat aaacaaaacc cacccgccct
      241 aacaaatatg aggctgctgg agagggcgag gaaagaatgg ttcatggtcg ggatagtggt
      301 ggcgatcggc gccgctaagc tcgagccgtc ggtcggagtg aacgggggac cactgaagcc
      361 agagataact gtgtcctaca ttgccgtcgc aacgatattc ttcaacagtg gactgtcatt
      421 aaaaacggag gagctgacca gcgcactggt gcacctgaga ctgcatcttt tcatccaaat
      481 cttcacactt gccttcttcc cagcagcaat atggctcttt cttcagctct tatcagtcac
      541 atccatcaac gagtggcttt taaaaggtct gcagacagta ggttgcatgc caccccctgt
      601 gtcttctgcc gtgattttaa ccaaggcagt tggtggaaat gaggcagctg cgatatttaa
      661 ttcagcattt ggaagttttt tgggcattgt tgtgactccg gtgctcctgc tgcttttcct
      721 cggttcatcc tcttcggtgc cttttacatc cattttctct cagctgttta tgacggtggt
      781 ggttcctctt gtcattggac agatcgtccg acgctacatc aaggactggc tggagaggaa
      841 gaagccacca tttggtgtgg tcagcagtag cgtgctactc atgatcatct acaccacctt
      901 ctgtgacacc ttctccaacc caaacatcga cctggacaag ttcagcctca tcctcatact
      961 gttcataata gtctccgttc agctgagctt catgcttctg actttcatct tctccacacg
     1021 gaataactcg gggttcacac cagcagacac agtggctatc atcttctgct ccacacacaa
     1081 gtccctcacc ttgggaatcc caatgctgaa gatagtgttt gcaggccatg agcatctctc
     1141 gctgatatcc gtgcccttgc tcatctacca cccagctcag attctcctgg gaagtgtgtt
     1201 agtgccaaca ataaagtctt ggatggtgtc caggcagaag ggagtgaagc tgacaaggcc
     1261 gacagtgtga ctcgggtggc gccagccttc ctggagtgtg tacatatatg tacaggctgt
     1321 acatacaggg gttctgagga cctgtccttg gggatgctgc tttgatgcct attttatttt
     1381 tttacagaaa aaaatatgat atacctgttt aagtgcctta cgatgttttt gacaagagcg
     1441 ttatttccaa aacacactct gttggctact gccaagggta gtacagtatt ttggactcat
     1501 ttttttccct aaggcagaaa aaaaagttct agtaagggac aaaagctaac acgttttctt
     1561 cgtactgcct ttgtgcaggc aagactctaa tagcactata acgttcaaaa tgaggtcatg
     1621 ccatccagaa acctccctcc tggtgacagt gaacgattcc aaagtctcat tcaccgcaca
     1681 ctttgattca ccgagtggtt ctttgtttct aagactgtga cgggctcttc cttatcaact
     1741 cagcggggga tgcagatcgc agagatgccg agaagcgtca ggtacctcat tccttgacac
     1801 cgtcttcttc catccatccc cgcacactcc agaaacactt cagtcccagc acagagtgtg
     1861 tgtgggggct gggggggggg gggggagtgc agcttagatg tattatcggc tgcttcagag
     1921 aaagtcctgg tgagtgttgc cgtgaactcg gacagtgctt tgggacgtct gcaatcgtac
     1981 ctcagtatgc ttctcccttc catcattcct tagtttccca ttttacttac acacaacatc
     2041 cccgtgcaac acccaaatgt cacagtcagc tggagagtca cagaaatcaa cagtggatta
     2101 tgtgttcaca ttccacagct ggttccaagc acattcctgt tacactgttc caaatcgttc
     2161 ctgttggcaa gacacaacct gttacattaa gcgcacttga gacatctgag aagatttatg
     2221 aatcatttga cagatgttca caacatctct taagaaatca aatcctatcg ccttaggagc
     2281 cagagaaaat aaacatgagg ccgtgggcat gagctaatgt tacatgtcca cactgctagt
     2341 caggtggaag aagggctggt ccagaagagc aggcaggacc ttccactcac cgagctgtca
     2401 acaggatgag tccgggaact gggcaccagc tttggaaagg actccagaaa agcctacgct
     2461 gaacccaaac aagaagctaa agcagcatac tgaacagtgg tgggagcgtc tttcctgagc
     2521 ttcctgctta gtgttggaac aggcatcacg ggtctcccca gcagctgcct ttgctgttgg
     2581 tagtgggggc tgtggaccca caatcaatca ttccttcaga attccctggg cttttcagtg
     2641 gtgttgggtt atgttatggt tagcattggt gttgtagatg atggtagttt atgtcatagt
     2701 taccgtggtt ggcgctggtg ttatggtgtt agcaccaggt cctctgtgtc actgtctcgg
     2761 gacttcataa ttctgagcat agctataaca ctggtgtcag gcctggcaga gatccacgct
     2821 gcacggcctg tggggaccat gctggggacg aggaggcagt gagtctgttt ggtgagtgtg
     2881 ctgcctccat ggagcacaaa ggttttcaag tctcaccccc acagccttgg ggctttagag
     2941 gaagtagaca ctgtctgcct gccagagttg tagacgcaac ccttccgtca tttgaacact
     3001 ggtttccccg ccgaccacat ctacctctct gtgcgtgact gcgacaaagt tcaactgaag
     3061 atgctatggt aactttttct cttttgcttt aaaactgtct tttgttttca aacaaaactg
     3121 atttatatca tgagttttgg gagctttagt aacatgtctg tggctacttc tccttttaca
     3181 caaatatgat agcatatttt tcatggtaag gaaaaaaata aaatcaaaat ttgctttaat
     3241 ttatgctcat taggattgaa ctgtcagctt aaaatacttt ctatgtttct gcactgccaa
     3301 tgtctgtttt atgtatttgt ttgtccaaat gtacctataa aaagaataca ttagacagtt
     3361 atgtttactc attccaacct ggaattggtt ttaaacggct ggaactttaa ggaacggcac
     3421 tgcagtcttt acgcatgtta caaacgttaa ggttctgtgg attttttaaa ttcttcccta
     3481 ttctgtttta aactggcaca cctctggttg acgctcagtg tttatgctaa aaaccaaatt
     3541 ttttcaaaga gatggctaag taattaagtg ggttatttat aatgaatgga aaatttaaaa
     3601 aaaaaattct atgattaaac agagagtact tgacgaatct ctgg
//
