LOCUS       NM_145406               2028 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus solute carrier family 10 (sodium/bile acid
            cotransporter family), member 3 (Slc10a3), transcript variant 1,
            mRNA.
ACCESSION   NM_145406
VERSION     NM_145406.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Tamplin,O.J., Kinzel,D., Cox,B.J., Bell,C.E., Rossant,J. and
            Lickert,H.
  TITLE     Microarray analysis of Foxa2 mutant mouse embryos reveals novel
            gene expression and inductive roles for the gastrula organizer and
            its derivatives
  JOURNAL   BMC Genomics 9, 511 (2008)
   PUBMED   18973680
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2028)
  AUTHORS   Kunarso,G., Wong,K.Y., Stanton,L.W. and Lipovich,L.
  TITLE     Detailed characterization of the mouse embryonic stem cell
            transcriptome reveals novel genes and intergenic splicing
            associated with pluripotency
  JOURNAL   BMC Genomics 9, 155 (2008)
   PUBMED   18400104
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2028)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   5  (bases 1 to 2028)
  AUTHORS   Greenfield,A., Carrel,L., Pennisi,D., Philippe,C., Quaderi,N.,
            Siggers,P., Steiner,K., Tam,P.P., Monaco,A.P., Willard,H.F. and
            Koopman,P.
  TITLE     The UTX gene escapes X inactivation in mice and humans
  JOURNAL   Hum Mol Genet 7 (4), 737-742 (1998)
   PUBMED   9499428
REFERENCE   6  (bases 1 to 2028)
  AUTHORS   Faust,C.J., Levinson,B., Gitschier,J. and Herman,G.E.
  TITLE     Extension of the physical map in the region of the mouse X
            chromosome homologous to human Xq28 and identification of an
            exception to conserved linkage
  JOURNAL   Genomics 13 (4), 1289-1295 (1992)
   PUBMED   1354645
REFERENCE   7  (bases 1 to 2028)
  AUTHORS   Maconochie,M.K., Brown,S.D. and Greenfield,A.J.
  TITLE     Sequence analysis of two exons from the murine dystrophin locus
  JOURNAL   Mamm Genome 2 (1), 64-68 (1992)
   PUBMED   1543903
REFERENCE   8  (bases 1 to 2028)
  AUTHORS   Derry,J.M. and Barnard,P.J.
  TITLE     Mapping of the glycine receptor alpha 2-subunit gene and the GABAA
            alpha 3-subunit gene on the mouse X chromosome
  JOURNAL   Genomics 10 (3), 593-597 (1991)
   PUBMED   1679744
REFERENCE   9  (bases 1 to 2028)
  AUTHORS   Filippi,M., Tribioli,C. and Toniolo,D.
  TITLE     Linkage and sequence conservation of the X-linked genes DXS253E
            (P3) and DXS254E (GdX) in mouse and man
  JOURNAL   Genomics 7 (3), 453-457 (1990)
   PUBMED   1973144
REFERENCE   10 (bases 1 to 2028)
  AUTHORS   Nasir,J., Fisher,E.M., Brockdorff,N., Disteche,C.M., Lyon,M.F. and
            Brown,S.D.
  TITLE     Unusual molecular characteristics of a repeat sequence island
            within a Giemsa-positive band on the mouse X chromosome
  JOURNAL   Proc Natl Acad Sci U S A 87 (1), 399-403 (1990)
   PUBMED   2296595
  REMARK    Erratum:[Proc Natl Acad Sci U S A 1990 Dec;87(23):9508]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BM939642.1, AK041958.1, AL807376.4 and AW493539.1.
            
            On Jan 5, 2012 this sequence version replaced NM_145406.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Variants 1 and 2 both encode the same protein.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC027440.1, AK041958.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-51                BM939642.1         1-51
            52-2008             AK041958.1         3-1959
            2009-2009           AL807376.4         151617-151617       c
            2010-2028           AW493539.1         1-19                c
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 38.0 cM"
     gene            1..2028
                     /gene="Slc10a3"
                     /gene_synonym="DXHXS253E; DXS253Eh; DXSmhG28; P3"
                     /note="solute carrier family 10 (sodium/bile acid
                     cotransporter family), member 3"
                     /db_xref="GeneID:214601"
                     /db_xref="MGI:MGI:95048"
     exon            1..159
                     /gene="Slc10a3"
                     /gene_synonym="DXHXS253E; DXS253Eh; DXSmhG28; P3"
                     /inference="alignment:Splign:2.1.0"
     exon            160..228
                     /gene="Slc10a3"
                     /gene_synonym="DXHXS253E; DXS253Eh; DXSmhG28; P3"
                     /inference="alignment:Splign:2.1.0"
     exon            229..2023
                     /gene="Slc10a3"
                     /gene_synonym="DXHXS253E; DXS253Eh; DXSmhG28; P3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggagtccta gcacgcggat ggaaccttgg tggggcggag cctgtggggg cgggacgagg
       61 cccgggcagg acgggcctca cttgccggcg tttgccggcc cgggccacta cttgtgagga
      121 gctctgtggc cgcggaagca agtgagagat ttcgaccagt taccttactc tggttttcct
      181 gcctccctct tcatcagcga gattcaaggc tggaccaggg cccccaggga aaaaatcctg
      241 ctatcaagga agaaaatata ggaccaggac cttcccatgg acccttctca ggacattcca
      301 acagcacaag caagggtgtc tccctaagac acaagaggcc tgaaaaaact atcctttgtg
      361 aagtgccatg gtggtcaaga aaagcagagg tagctcccag cagttgcctg gcctgggagg
      421 acagggtggt tgtacaggtt ttgtaggcat gcttggaact gccctgctgt tcatcagcct
      481 accatgggga gctcaagtga tggccagtgc caacatcagc actgctctgg gccacacaag
      541 tggtcactat ttgagtattg gggatggctc agtgacagaa tttgatttcc ctgagaagag
      601 tgagggtatc attgtgatct ctagccaata cactggacag accaatggga caggccccag
      661 ccccatactt aaggttatat ccctggacac agaggtgctg accattaaga atgtgagtgc
      721 cataacctgg agcagtggag gtggctttgt ggtaggcatc cactcaggtc tagctgggct
      781 ggccccactc cacctccagc tcatggattt ctatgaggcc ccacccctgc tgatcgaaga
      841 acggagagat ttctgcatca gggtgtcacc tgctgaagac ctcccttctg ctctcaacac
      901 caacttgggc cacttctcag agaacccaat actctacttg cttctgcctc ttatctttgt
      961 caacaagtgt tcatttggtt gcaaagtgga acttgaagtt ttgaaggagc tcctacagag
     1021 cccccaaccc atgctgttgg gcctcttggg ccagtttctg gtcatgcctt tctatgcttt
     1081 cctgatggcc aaagtcttca tgctacccaa ggccttagct ctgggcctca tcattacctg
     1141 ctcatcacct ggtggtggag ggagctacct cttcagtctc ctccttggag gagatgtcac
     1201 cctggccatc tccatgactt tcatctcaac agtagctgcc actggtttcc taccactctc
     1261 atcagccatc tacagctacc ttctcagcat ccatgaaaca ctccacgtgc ccatctccaa
     1321 gatattgggg accctgctgt ttatcgccat ccccatagca gcgggtgtgg tgatcaaatc
     1381 taagctcccc aagttctctg aactactgtt acaggtcatc aagcccttca gctttatact
     1441 tctcctgggt ggcctgttcc tggcctacca catgggggtc ttcatcctag tgggagtcag
     1501 gttacccatt gtactggtgg gtttcacagt gcctcttgtt ggcctcttgg tgggctacag
     1561 cctggccatc tgcctgaagc tgccagtggc tcagcgacga acagtcagca ttgaggtagg
     1621 ggtgcaaaac agcctgctag ccttagccat gctacagctg tctctgcgcc gccttcaagc
     1681 agactatgcc tctcaggccc ctttcattgt ggcactgagt ggtacctccg agatgttggc
     1741 tttggttatt ggccagttca tctatagcat cttgtttcct gttccctgag ccctctggat
     1801 caagttttat aacttccagc ccccatactc ctctcttccc acagttcttg tgtaccgtac
     1861 caaaggcctt tagttctcat gcactatgca ctcaagacaa atccaggctt atttttttac
     1921 tccttttcgc cccagctttc agtgccaaag aggccatgct gagttagata gttgggtatt
     1981 gcccagaaat atatttcaat aaaaaaaaac caaaaaaaca aaaaaaaa
//
