LOCUS       XM_030250634            2262 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus SIL1 nucleotide exchange factor (Sil1),
            transcript variant X3, mRNA.
ACCESSION   XM_030250634
VERSION     XM_030250634.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000084.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="18"
     gene            1..2262
                     /gene="Sil1"
                     /gene_synonym="1810057E01Rik; wz"
                     /note="SIL1 nucleotide exchange factor; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 mRNAs, 11 ESTs, 308 long SRA reads, 6 Proteins, and
                     94% coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:81500"
                     /db_xref="MGI:MGI:1932040"
     CDS             708..2105
                     /gene="Sil1"
                     /gene_synonym="1810057E01Rik; wz"
                     /codon_start=1
                     /product="nucleotide exchange factor SIL1 isoform X1"
                     /protein_id="XP_030106494.1"
                     /db_xref="GeneID:81500"
                     /db_xref="MGI:MGI:1932040"
                     /translation="MAPQHLPSTRMASPGMLLGLLLTSCLTLCLSCQNSNNFALTNPE
                     KSIHQESDTKETREEEELDTEILEVFHPTQEWQTLQPGQAVPAGSHVRMNLQTGVNEV
                     KLQQEDKFQNNLKGFKRGRRLDINANTYTSQDLKSALAKFKEGTEMENSKDELARQAT
                     VKQLFRPIEELKKEFDELNVVLETDMQIMVRLINKFNSSSSSLEEKVAALFDLEYYVH
                     QMDNAQDLLSFGGLQVVINGLNSTEPLVKEYAAFVLGAAFSSNPKVQVEAIEGGALQK
                     LLVILATNQPLPAKKKVLFALCSLLRHFPYAQQQFLKLGGLQVLRSLVQEKSAKVLAV
                     RVVTLLYDLVTEKMFAEEEAELTQDSSPEKLQQYRQVQLLPGLQEQGWCEITAQLLAL
                     PEHDAREKVLQTLGALLTTCRDRYRQDLQLSRTLGRLQAEYQALASLELQEGEDDGYF
                     RELLASINSLMKELR"
ORIGIN      
        1 ctatttatcg ttcaaataat ttatcattta aaaaacatac tcaaaacaca attatataaa
       61 gctagtgact acttacaggt actctatttt gcatacattt ttcaaaggac tatttattgc
      121 ttgaggttca atgtgtgtca caaactgagt cataacatcg tgatttatat ttacctccca
      181 cccactcagg tttctttctg aagatcttta cactagaaag aaattacggt cttgggaaat
      241 taaacaagaa actgaagttc taggtgggaa acaagagcag gcccacgggt agctattttt
      301 agatacagct cccagcggag ggacatgaac aaatttcagc attttttgcg gaggaagacg
      361 ctaggggcgg ggcttagcag ctgaggaagg cggggctaac aatgccgcgt ggggtgagag
      421 ttgctggagg ctgttctggc aagttatcat tgggcaaggt tgagagtgac gtaatagcca
      481 cgcgccttca gccttcggca gccgctggac ggcgtttgcg cacgaggagc tggttgccgc
      541 tgcagccgcc tggaattgtg gggattgtgt ctgcccctcg gctgccgtgg aaagccgaag
      601 aagaaagtaa tttattgagt gtaccacaag aatgaagcag gcccggcagg aacagaagaa
      661 gcacctgcct gagacagtag gctggggagc gcccagaggt cctggttatg gctcctcagc
      721 acctgccttc aactaggatg gcctctccag gaatgctgct ggggctgctg ttgacttcct
      781 gtttaactct ctgcctcagc tgtcagaact caaataattt tgcactcacc aacccagaga
      841 agagcatcca ccaggaatca gatacaaagg agaccaggga agaggaggag ctagacaccg
      901 agatcctgga ggtgttccac ccaactcaag agtggcagac ccttcaacca ggtcaggctg
      961 ttcctgcagg atcccatgtg cgaatgaacc tacagactgg agtaaacgag gtgaagctcc
     1021 aacaagaaga caaatttcaa aataatctga aaggatttaa aagaggcaga aggctggaca
     1081 tcaacgccaa cacatacaca tctcaggacc tcaagagtgc gctggccaaa ttcaaggagg
     1141 ggaccgagat ggagaattca aaggatgaac tggcgagaca ggccacagtc aagcagctct
     1201 tccgccccat tgaggagctg aagaaggaat ttgatgagct gaacgttgtt cttgagactg
     1261 acatgcagat tatggttcgg ctgataaaca agttcaacag ctccagctcc agcctagaag
     1321 agaaggttgc tgcgctcttt gatcttgagt actatgtcca tcagatggat aacgcacagg
     1381 acctgctgtc ctttggtggc cttcaagtgg tgattaatgg gctcaacagc acagaacccc
     1441 tggtgaagga gtatgctgct tttgtgctgg gggccgcctt ttccagcaat ccgaaggtcc
     1501 aggtggaagc catcgaaggg ggagccctgc agaagctgct ggtcatcctg gccacaaacc
     1561 agcctctccc cgccaagaag aaggtcctgt ttgcactgtg ctccctgctg cgccacttcc
     1621 cctatgccca gcagcagttc ctgaagctcg ggggcctgca ggtcctcagg agcctggtac
     1681 aggagaagag tgcgaaggta ctggccgtgc gtgtggtcac cctgctctat gacctggtca
     1741 ctgagaagat gtttgctgag gaggaggcag agttgaccca ggattcatcc ccagagaagc
     1801 tgcagcagta tcgccaggtg cagctcctgc caggcctgca ggaacagggt tggtgtgaga
     1861 tcaccgccca gctcctggcc cttccagagc atgatgctcg ggagaaggtg ctgcagacac
     1921 tgggtgccct cctgaccacc tgccgggatc gctaccgtca ggacctccag ttgagcagga
     1981 cactagggcg tctccaagca gagtaccaag ccctggcctc cctggagctc caagaaggcg
     2041 aagatgatgg ctacttccgg gaactgctgg cctccatcaa cagcttgatg aaggaactaa
     2101 gatgaggctg ccatgccgag accaggactg gacggatgct gctagtgaga gctttggtgg
     2161 gctcttcagg ggacatcaac tacgaggagg acttaacctg ctggggcatg agtgtcacct
     2221 gggcagagct tgctaggtca ttaaacagag acatgatgac aa
//
