LOCUS       XM_006541319            1528 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus sialic acid binding Ig-like lectin E
            (Siglece), transcript variant X2, mRNA.
ACCESSION   XM_006541319
VERSION     XM_006541319.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006541319.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..1528
                     /gene="Siglece"
                     /gene_synonym="Cd170; mSiglec-E; Siglec12; Siglec5;
                     Siglec9; Siglecl1"
                     /note="sialic acid binding Ig-like lectin E; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 10 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     16 samples with support for all annotated introns"
                     /db_xref="GeneID:83382"
                     /db_xref="MGI:MGI:1932475"
     CDS             30..1436
                     /gene="Siglece"
                     /gene_synonym="Cd170; mSiglec-E; Siglec12; Siglec5;
                     Siglec9; Siglecl1"
                     /codon_start=1
                     /product="sialic acid-binding Ig-like lectin 12 isoform
                     X2"
                     /protein_id="XP_006541382.1"
                     /db_xref="GeneID:83382"
                     /db_xref="MGI:MGI:1932475"
                     /translation="MLLLLLLLLLWGIKGVEGQNPQEVFTLNVERKVVVQEGLCVLVP
                     CNFSYLKKRLTDWTDSDPVHGFWYREGTDRRKDSIVATNNPIRKAVKETRNRFFLLGD
                     PWRNDCSLNIREIRKKDAGLYFFRLERGKTKYNYMWDKMTLVVTALTNTPQILLPETL
                     EAGHPSNLTCSVPWDCGWTAPPIFSWTGTSVSFLSTNTTGSSVLTITPQPQDHGTNLT
                     CQVTLPGTNVSTRMTIRLNVSYAPKNLTVTIYQGADSVSTILKNGSSLPISEGQSLRL
                     ICSTDSYPPANLSWSWDNLTLCPSKLSKPGLLELFPVHLKHGGVYTCQAQHALGSQHI
                     SLSLSPQSSATLSEMMMGTFVGSGVTALLFLSVCILLLAWWELLSNTGASVTGALATL
                     TTCHRLNCKQRVGESANRTPSCYTERLLGVLTPRVRSYRRKPARPAVVAPHPDALKVS
                     VSQATASVLGAFKGGQES"
ORIGIN      
        1 agagcctgga gagacagttt tagctggaca tgctgctgtt gctgctgctg ctgctgctct
       61 gggggataaa gggtgtggag ggtcagaacc cccaagaggt tttcaccctg aatgtggaaa
      121 ggaaggtggt ggtgcaggag ggcctgtgtg tccttgtgcc ctgtaacttc tcctatctca
      181 agaagaggtt gactgactgg actgactcag acccagttca tggattctgg tacagggaag
      241 gaaccgacag acgcaaagat tccatcgtgg ccacaaataa cccaattcgt aaagcagtga
      301 aggaaacccg gaatcgattc ttcctgctcg gagacccttg gaggaatgac tgctccctga
      361 acatcagaga gatcagaaag aaggatgcgg ggttatactt ctttcgcctg gagcgtggaa
      421 aaacaaagta taattacatg tgggacaaga tgactctggt tgtaacagcc ctcactaaca
      481 ccccccaaat tcttctcccg gagacgcttg aagctggcca tcccagcaac ctgacctgct
      541 ctgtgccttg ggactgtggg tggacggcac ctcccatctt ctcctggact ggtacctctg
      601 tgtcattttt gagcaccaac actacgggtt cctcagtgct aaccatcacc cctcagcctc
      661 aggaccatgg caccaacctc acttgtcagg tgaccctgcc tggaactaat gtgtccacaa
      721 gaatgaccat ccgtctcaac gtgtcatatg ctccaaagaa tctgactgtg accatctatc
      781 aaggagctga ctcagtttcc acaatcctga agaatggctc atctcttcct atctctgagg
      841 gccagtcact gcgtctcatc tgcagcaccg acagctatcc ccctgcgaac ctaagctggt
      901 cctgggataa cctgaccctg tgcccatcaa agttgtccaa gcccgggctc ctggagctgt
      961 ttccagtgca tcttaagcac ggaggagtgt atacctgcca agctcaacat gccctgggct
     1021 cccaacacat ttccttgagc ctgtctccac agagcagtgc aactttatct gaaatgatga
     1081 tggggacctt tgtgggttca ggagtcacag ccctcctttt cctgtctgtc tgcatcctcc
     1141 tcctggcatg gtgggagctg ctttccaaca caggagcctc tgtgacggga gcactggcca
     1201 ccttgaccac ctgtcacaga cttaactgca agcagagggt gggggagtct gccaaccgca
     1261 ctccttcctg ctatactgag aggctccttg gtgtccttac acccagagta agatcctaca
     1321 ggaggaaacc agccaggcca gctgtggtag ctccgcaccc agatgccctc aaggtctcag
     1381 tttctcaggc taccgctagt gtcctgggtg catttaaagg tggacaagaa agctgaagag
     1441 aatcccctgg ttgaatccca ggcagatgac agctctgagc ccctgccttc catacttgag
     1501 gcggccccct cctccacaga ggaagaga
//
