LOCUS       XM_036162622             883 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus shieldin complex subunit 1 (Shld1),
            transcript variant X7, mRNA.
ACCESSION   XM_036162622
VERSION     XM_036162622.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..883
                     /gene="Shld1"
                     /gene_synonym="1110034G24Rik"
                     /note="shieldin complex subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 17
                     ESTs, 85 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 6 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:73747"
                     /db_xref="MGI:MGI:1920997"
     CDS             16..483
                     /gene="Shld1"
                     /gene_synonym="1110034G24Rik"
                     /codon_start=1
                     /product="shieldin complex subunit 1 isoform X4"
                     /protein_id="XP_036018515.1"
                     /db_xref="GeneID:73747"
                     /db_xref="MGI:MGI:1920997"
                     /translation="MTTQRLRADSNSLNTEQKGSWDSENFWLDPSSKGQLETNEEEDG
                     LRKSLDRFYEAFAHPLPGSGDPLSASVCQCLSQTISELEGQESQRYALRSFQMAQVIF
                     SRDGCSILQRHSRDTRFYPLEQEGSSVDDEEPTPGLSREVIRFLLEQTVMKDS"
ORIGIN      
        1 tccgctgcgt agaggatgac gacccagagg ctgcgcgcag atagcaattc tctaaatact
       61 gagcaaaaag gctcctggga ctctgagaac ttctggcttg atccttcttc gaaaggccag
      121 ttggagacca atgaagaaga ggatggactt cggaaatccc tggatagatt ctatgaagca
      181 tttgcccatc cactgccagg ctctggggat ccgctctctg catctgtgtg tcagtgcttg
      241 tctcagacaa tctctgagct cgagggccag gagagccaaa ggtatgctct ccgcagtttc
      301 caaatggccc aggtcatctt cagccgggat ggctgctcta tcttacagcg acattccagg
      361 gacacacgct tttacccact agagcaagaa ggcagctctg tagatgatga agagcccacc
      421 ccaggactgt caagagaggt cattcgtttc ctcttggagc agactgtaat gaaagactcg
      481 tagctgctgc tgatgtgaat gtgggcagtg ctagagagga agtgctgttg cctggtcccc
      541 agagtccatg ggtacatgtg ggcttctctg gcatctttct atttccagct gttagccata
      601 agctttgcag ttagaggcta gcttcagcaa cctggtgatg gagtcagtaa gcatcttggt
      661 gtgctacctc ttgcttacct tggccaaggc tgctactgac tcaattaggg ttgagtccta
      721 gcccagcttc ttgccttagt ctgtgctcct gagtgctgtc ctggggacct ggccagagct
      781 gggactttgg caggaaatca cttccctgct tggcttcatc ccttccccca ctcacctact
      841 ggtgtctcta gggccttttc ttaataaact tcttatatct gca
//
