LOCUS       NM_029984               1310 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus shisa like 2B (Shisal2b), mRNA.
ACCESSION   NM_029984 XM_127537
VERSION     NM_029984.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK042897.1.
            
            On Jan 24, 2005 this sequence version replaced XM_127537.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK042897.1, BY755888.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849377
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 56.87 cM"
     gene            1..1310
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /note="shisa like 2B"
                     /db_xref="GeneID:77803"
                     /db_xref="MGI:MGI:1925053"
     exon            1..371
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..657
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /note="membrane protein FAM159B; family with sequence
                     similarity 159, member B"
                     /codon_start=1
                     /product="protein shisa-like-2B"
                     /protein_id="NP_084260.1"
                     /db_xref="CCDS:CCDS26754.1"
                     /db_xref="GeneID:77803"
                     /db_xref="MGI:MGI:1925053"
                     /translation="MSQSSRLCSGYYSLNRSFVEPFQCPQRGDGAALLYCCGFADLKY
                     CCSEPGSYFPYKHSYMWSLSIGALVGLGIAALVLLAFVISVCVLCYLFLYTKPQRLDN
                     GLKLQHLETSSTLEGNINRKAKGLNAVSNSTNETFYEADDGTQEKTMDITQINIAC"
     exon            372..529
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /inference="alignment:Splign:2.1.0"
     exon            530..1310
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      736..741
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /note="hexamer: AATAAA"
     regulatory      742..747
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /note="hexamer: AATAAA"
     polyA_site      754
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /note="major polyA site"
     polyA_site      767
                     /gene="Shisal2b"
                     /gene_synonym="A930021C24Rik; Fam159b"
                     /note="major polyA site"
ORIGIN      
        1 gagcagagag ctccggcacc tcgtggacag cgggaggtag agcggagagg gctcagaggc
       61 tgagtgccag gcacttggac cccaaatcgc aggaggcgcc cagggttgcc tgggcttggg
      121 acgagcgcag tccgagcaca catcgcacgc acctcgggat cctgagcacg gccgccggcg
      181 atgagccaga gcagccgcct gtgctcgggc tactacagcc tcaaccgcag cttcgtggag
      241 cctttccagt gcccgcagcg cggcgatggg gccgcgctgc tctattgctg cggcttcgca
      301 gacctcaagt actgctgcag cgagccgggc agctacttcc cctacaagca cagctacatg
      361 tggagcctca gtattggtgc tctggttgga ttgggaatcg ctgcccttgt cttacttgcc
      421 tttgtcatca gtgtctgtgt cctctgctac ttatttctgt acacaaaacc tcaaagatta
      481 gacaatggcc ttaaacttca gcacctagag acatcttcta ccctagaagg caacataaac
      541 agaaaagcca aaggcctcaa tgcagtatca aattcaacaa atgagacctt ctatgaagct
      601 gacgatggga ctcaagagaa aacaatggat ataacacaaa tcaatattgc ctgttagtta
      661 aaatccctgt tttgaaagtt tatctgagag agggagcatt aagaataaag aatgaaaaaa
      721 aatacaaaaa agttaaataa aaataaagaa tgcattttat ttgtggattt gttttgtttg
      781 ttatgttttt tgttgttgtt gtcattttaa atatagactt tatatacatg gccttgctca
      841 tcctggaact cactatgcag actgggcctc ctgagtgctg aggtttaagg tctgggccac
      901 cacatttgtc aagaacacat tttagatcag ctgctaacat cactttccca aaatctgtca
      961 ctcacaaagc aaggccagct gcagttttag tgaattcatt tattagacac tcactaaggt
     1021 gctgttgttt atgggtagaa gtttactgtg tcaagtttct gtacaacatg aagctacgct
     1081 tttctatcaa aatgagttca gcaacgatgg agagacaaac caatcacagt gaagcgcaat
     1141 acgtgggttt gtttcattac caacctttca caatcattta atacaggatg ctactgttaa
     1201 ttccgggaaa gcaaacctgg tggcgggtct tgtctcaagt ctcttagaaa tcaatgtttc
     1261 tgagaatttg tgtatgtgtg cagcaaaaat aaattacctt cataaaagtt
//
