LOCUS       XM_030249612            2011 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus src homology 2 domain-containing
            transforming protein D (Shd), transcript variant X2, mRNA.
ACCESSION   XM_030249612
VERSION     XM_030249612.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..2011
                     /gene="Shd"
                     /note="src homology 2 domain-containing transforming
                     protein D; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 mRNAs, 13 ESTs, 508 long SRA
                     reads, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:20420"
                     /db_xref="MGI:MGI:1099461"
     CDS             764..1795
                     /gene="Shd"
                     /codon_start=1
                     /product="SH2 domain-containing adapter protein D isoform
                     X2"
                     /protein_id="XP_030105472.1"
                     /db_xref="GeneID:20420"
                     /db_xref="MGI:MGI:1099461"
                     /translation="MAKWLRDYLNLGSRRPPPQPPTPDYTESDILRAYREQKDLDFED
                     PYEDSNGRAEPEVTGSGDPKYNSPRHRLIKVEAADMARAKALLGSPGEEPEAETEYSD
                     PFDAQPQPPAPNSGYMEPYDARSVSSEQPSRAVQLYDTPYEEQATKPEDGGSSGQSRR
                     PLEDERPADEYDQPWEWKKDHISRAFAVQFDGPDWERTPCSTKEPWRPQPAERVDTAL
                     ALEKQPWFHGPLSRAEAENLLSLCKEGSYLVRLSETRAQDCILSLRSNQGSMHLKFAR
                     TRENQVVLGQHSGPFPSIPELVLHYSARPLPVQGAEHLALLYPVTSSQSSQGPCTLAA
                     KPERGQGDP"
ORIGIN      
        1 ggatctggtg acccctgggg acgctgcctg acagagatag gagtgggtgg ttagggggac
       61 ttagcctact ccagatgccg tgctggctct aggcctcagt ttctctgcct ggaaaacaga
      121 gctcacagtg gacaagagga tgaccgctct ctctgtgagc caccagtgcc atcctagaga
      181 tgtccaggca caaatggtca gatgggtggc ttgagtttcg ctccacacac aaagcctttc
      241 tatgcctcag tttcgccaac ctcaacgtct cagtcggtag ggcgcttgct agtatgcaca
      301 aagcctggag tgtcatccct aaatgctggg agactgaggc aggaggatca ggagttcgag
      361 gtcatccttt gctgcaactc catctgcagc ccttgaggtc tgagcccacc tccctccctc
      421 cgctcgcgga cccgcagctg ccgacgcctc ccacccctcc ccctcgcccg gcacaaagcg
      481 acggacggac gcagcggtga cggacgacgc ctcccgccct gcgccacctc cagccgcgac
      541 cctgcgcgat gctcgggcct ctcgcccaat ccctgcccgg ccctggtccc aagggcaact
      601 cggtccccac gccggtggtc tcgtcctccg ggatcctcca gggtccgagt cctgctgtct
      661 ccaccccgga gccacagaag gtctgaggtc tgcagcccca ggacgagctg cagagctagg
      721 catgaaggtc cttgtttgac accagcatat tttgggggca ccaatggcca agtggctccg
      781 agactatctg aacttgggca gccggaggcc gcctccgcag ccgcccaccc ccgactacac
      841 cgagagcgac atcctgcggg cctaccgcga acagaaggac ctggacttcg aggaccccta
      901 tgaggattcc aatggccgcg ctgagccaga ggtcaccggg tccggtgacc ccaagtacaa
      961 ctctcctagg caccggctga tcaaggtgga ggctgcagac atggccagag ccaaggctct
     1021 gctggggagc ccgggggaag agccggaagc agaaactgag tactcagacc cttttgatgc
     1081 ccagcctcag ccaccagccc ccaacagtgg gtacatggag ccctatgatg cccggagcgt
     1141 ctccagtgaa cagccaagca gagctgtcca gctttacgat actccatatg aggagcaggc
     1201 tacgaaacca gaagatggag ggtcttcggg ccagagccgg aggcccctgg aggatgagag
     1261 gccagcagat gaatacgacc agccttggga gtggaagaag gatcacatct ccagggcttt
     1321 cgcagtgcaa tttgatggtc ctgactggga acggactcca tgctccacca aggagccctg
     1381 gagaccacag cctgcggagc gtgtggatac agcccttgcc ctggagaagc agccgtggtt
     1441 tcacggcccc ctgagccgag cagaggccga gaaccttctg tccctctgca aggaaggcag
     1501 ctacctcgtt cggctcagcg agaccagggc tcaggactgc attctgtctc tcagaagcaa
     1561 ccagggttcc atgcacctga aattcgcaag gacccgggag aaccaggtgg tactgggaca
     1621 gcacagtggg cccttcccca gcatacctga gctggtcctg cattacagtg cccgcccact
     1681 gcccgtgcaa ggggcagagc acctggccct gctctatcct gtcaccagca gccagagctc
     1741 tcaaggaccc tgcacattgg ctgctaagcc agagagggga caaggggacc catgacgcac
     1801 agacttcctt taatgccctc tagtggggtg ctccagatca tggcctgcgg gcatgcttga
     1861 caggtgaaga aaggcggctg ccgccaggcc tgctgggctc aaccctggga atccacacgg
     1921 tggcagccga gagctgcaag tcgttctctg atttacaaac aagtcacaca ccataaatta
     1981 ataaataaat gtaataaaaa ttaatcttaa a
//
