LOCUS       NM_001033162            2045 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus Shc SH2-domain binding protein 1-like (Shcbp1l), mRNA.
ACCESSION   NM_001033162
VERSION     NM_001033162.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Liu,M., Shi,X., Bi,Y., Qi,L., Guo,X., Wang,L., Zhou,Z. and Sha,J.
  TITLE     SHCBP1L, a conserved protein in mammals, is predominantly expressed
            in male germ cells and maintains spindle stability during meiosis
            in testis
  JOURNAL   Mol Hum Reprod 20 (6), 463-475 (2014)
   PUBMED   24557841
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Lo,J.C., Jamsai,D., O'Connor,A.E., Borg,C., Clark,B.J.,
            Whisstock,J.C., Field,M.C., Adams,V., Ishikawa,T., Aitken,R.J.,
            Whittle,B., Goodnow,C.C., Ormandy,C.J. and O'Bryan,M.K.
  TITLE     RAB-like 2 has an essential role in male fertility, sperm
            intra-flagellar transport, and tail assembly
  JOURNAL   PLoS Genet 8 (10), e1002969 (2012)
   PUBMED   23055941
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK161274.1.
            
            On Apr 6, 2007 this sequence version replaced NM_001033162.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK161274.1, BC113157.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2045              AK161274.1         2-2046
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 65.36 cM"
     gene            1..2045
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /note="Shc SH2-domain binding protein 1-like"
                     /db_xref="GeneID:71836"
                     /db_xref="MGI:MGI:1919086"
     exon            1..378
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1935
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /note="SHC SH2 domain-binding protein 1-like protein"
                     /codon_start=1
                     /product="testicular spindle-associated protein SHCBP1L"
                     /protein_id="NP_001028334.1"
                     /db_xref="CCDS:CCDS15372.1"
                     /db_xref="GeneID:71836"
                     /db_xref="MGI:MGI:1919086"
                     /translation="MESDATTSEPKASVGSDSSPAEQTVLATLRDSVAAPTRGFMSPV
                     RSVVASPRPVKGKAARRRLQLPPVTQAETCDEEPVPAVPEDQEEAQPLPPIYASPMRG
                     MWRSEKVALYCDQVLQGSKAEDAEEAMSRYLLEKLKAKDRWLGVWKSNPELFFEKYEE
                     ASIPFVGILVEVTCKPRQNLSSCFKVTVSVAEPFSSNIANIPRDLVDEVLGELEYSAP
                     LLEVYPVDGQDADVRDIALALEVVRFFYDFLWRDWDDEENCENYTALIEERINLWCDI
                     QDGTIPGPIAQRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVECWKKYYEIVMLCG
                     LLKMWEDLRLRVHGPFFPRILRRRKGKRDFGKTITHIVAKVMTTDMVKNLSSDTLLQQ
                     HNDLNLALDSCYSGDIVVIFPGEYQASNLALLTDDITIKGVGKREEIMITSEPSHDSF
                     VVSKADNVKLMQLSLIQQGTVDGIVVVESGHLTLENCLLKCEGTGVCVLTGASLTITN
                     SEITGAQGAGVELYPGSIAILEGNEIHHCNNLRTSDSSKSTLGGVNMKVLPAPKLKMT
                     NNHIYNNNGYGVSILQPSEQFFIVAEAALNKGAASGDKKDDKMLSKVMQTLNVEMNNN
                     RIEANLKGDIRIVTG"
     exon            379..528
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            529..743
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            744..830
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            831..1049
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1050..1155
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1156..1309
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1310..1560
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1561..1683
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1684..2045
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2027..2032
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2045
                     /gene="Shcbp1l"
                     /gene_synonym="1700012A16Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggctgcggcg cgaacatgga gtcggatgcc acgacctcag agcccaaggc ctcggtcggg
       61 agtgacagct cgccagcgga gcagactgtc ttagccaccc tccgggactc ggtggccgcg
      121 cccaccaggg gcttcatgtc ccccgtgcgc tcggtagtgg cctccccgcg ccccgtgaag
      181 ggcaaggcgg cacggcgacg gctccagctc ccaccggtca cccaagccga aacatgtgac
      241 gaggagcccg tgcccgcggt gcctgaggac caggaggaag cgcagcccct gccaccgatc
      301 tacgcatccc ccatgagggg catgtggcgc agcgagaagg tggctctgta ctgcgaccag
      361 gtgctacagg gctcgaaggc agaagatgca gaggaagcta tgagtagata cctgttggag
      421 aagctgaaag cgaaggacag atggctcgga gtctggaaga gtaacccgga gctcttcttt
      481 gagaaatatg aagaggcgtc catccctttt gttgggatcc tggtcgaggt aacgtgtaaa
      541 ccccgccaga acttgtcgtc ttgtttcaaa gtgacagttt ctgtggctga gcccttttct
      601 tctaacattg caaatatccc tcgggacttg gtggacgagg ttctgggcga gctggaatac
      661 agcgcgcctc tcctggaggt gtatcccgtg gacgggcagg acgccgatgt ccgagacatt
      721 gctctggccc tggaagttgt aaggtttttt tatgattttc tttggagaga ctgggatgat
      781 gaagaaaatt gtgagaatta tactgccctt attgaagaaa gaattaatct gtggtgcgac
      841 atccaggacg ggacaatccc cggccccatc gcgcagcgct tcaagaaaac gctcgagaag
      901 tacaaaaaca agcgagttga gctcatcgag taccagagca acatcaagga agacccgtct
      961 gcggccgagg ccgtcgagtg ctggaagaag tactatgaga tagtgatgct ctgcgggctg
     1021 ctgaagatgt gggaagactt gcggctaaga gttcatggac ctttctttcc gaggattctg
     1081 agacgtagaa aagggaagag agactttggg aagactataa cccacatcgt agccaaagtg
     1141 atgaccaccg acatggtaaa gaacttgtct tctgacacac ttctgcagca gcataatgac
     1201 ctgaacctgg ctttggacag ctgctatagt ggagatatag tagtcatttt cccgggagaa
     1261 tatcaagctt caaacctcgc tttgttgact gatgacatca ctataaaggg agttggaaag
     1321 agagaagaaa ttatgattac ttctgaacct tcgcatgaca gttttgtggt atccaaagct
     1381 gataatgtga aattaatgca gctttctttg atacaacaag ggacagttga tggcattgtg
     1441 gtggtagagt ctggtcacct gactcttgaa aactgcttgc taaagtgtga agggacagga
     1501 gtgtgcgttc tcacaggggc ttcactgacg atcacaaaca gtgagataac tggtgcccag
     1561 ggtgctggtg ttgaactgta tcctgggagc atagccattt tggaagggaa tgagattcat
     1621 cactgtaata acctcagaac cagtgacagc tcaaagagca ccttaggtgg tgttaacatg
     1681 aaggttcttc cagcacccaa actgaagatg acgaacaatc atatctacaa caacaatggc
     1741 tatggagtga gcattcttca gccatcggaa cagttcttta ttgtagcaga agcagctctc
     1801 aacaaagggg ctgcttcagg agataagaaa gatgacaaaa tgctctccaa agtcatgcaa
     1861 actctgaatg tggaaatgaa caacaacagg atagaagcca acttaaaggg ggatattagg
     1921 atagtcaccg ggtaaagtgt ctggataggt gttcgttcgt gttttatagt tcaggaatgt
     1981 gataaatgat tcttgtatct cagaaatggt tgttttaaat tcaaagatta aaatgtttaa
     2041 atgct
//
