LOCUS       NM_015825               1321 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus SH3-binding domain glutamic acid-rich protein
            (Sh3bgr), mRNA.
ACCESSION   NM_015825 XM_976184 XM_985584
VERSION     NM_015825.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Zoupa,M., Xavier,G.M., Bryan,S., Theologidis,I., Arno,M. and
            Cobourne,M.T.
  TITLE     Gene expression profiling in the developing secondary palate in the
            absence of Tbx1 function
  JOURNAL   BMC Genomics 19 (1), 429 (2018)
   PUBMED   29866044
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Willnow,T., Antignac,C., Brandli,A., Christensen,E., Cox,R.,
            Davidson,D., Davies,J., Devuyst,O., Eichele,G., Hastie,N.,
            Verroust,P., Schedl,A. and Meij,I.
  TITLE     The European renal genome project: an integrated approach towards
            understanding the genetics of kidney development and disease
  JOURNAL   Organogenesis 2 (2), 42-47 (2005)
   PUBMED   19521566
REFERENCE   3  (bases 1 to 1321)
  AUTHORS   Gitton,Y., Dahmane,N., Baik,S., Ruiz i Altaba,A., Neidhardt,L.,
            Scholze,M., Herrmann,B.G., Kahlem,P., Benkahla,A., Schrinner,S.,
            Yildirimman,R., Herwig,R., Lehrach,H. and Yaspo,M.L.
  CONSRTM   HSA21 expression map initiative
  TITLE     A gene expression map of human chromosome 21 orthologues in the
            mouse
  JOURNAL   Nature 420 (6915), 586-590 (2002)
   PUBMED   12466855
REFERENCE   4  (bases 1 to 1321)
  AUTHORS   Reymond,A., Marigo,V., Yaylaoglu,M.B., Leoni,A., Ucla,C.,
            Scamuffa,N., Caccioppoli,C., Dermitzakis,E.T., Lyle,R., Banfi,S.,
            Eichele,G., Antonarakis,S.E. and Ballabio,A.
  TITLE     Human chromosome 21 gene expression atlas in the mouse
  JOURNAL   Nature 420 (6915), 582-586 (2002)
   PUBMED   12466854
REFERENCE   5  (bases 1 to 1321)
  AUTHORS   Pletcher,M.T., Wiltshire,T., Cabin,D.E., Villanueva,M. and
            Reeves,R.H.
  TITLE     Use of comparative physical and sequence mapping to annotate mouse
            chromosome 16 and human chromosome 21
  JOURNAL   Genomics 74 (1), 45-54 (2001)
   PUBMED   11374901
REFERENCE   6  (bases 1 to 1321)
  AUTHORS   Egeo,A., Di Lisi1,R., Sandri,C., Mazzocco,M., Lapide,M.,
            Schiaffino,S. and Scartezzini,P.
  TITLE     Developmental expression of the SH3BGR gene, mapping to the Down
            syndrome heart critical region
  JOURNAL   Mech Dev 90 (2), 313-316 (2000)
   PUBMED   10640719
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC164647.3 and AC165170.2.
            
            On Feb 9, 2007 this sequence version replaced NM_015825.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ272170.1, BC055870.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-279               AC164647.3         16589-16867         c
            280-465             AC164647.3         10670-10855         c
            466-546             AC164647.3         3244-3324           c
            547-618             AC165170.2         21920-21991
            619-711             AC165170.2         22930-23022
            712-792             AC165170.2         26232-26312
            793-910             AC165170.2         26905-27022
            911-1321            AC165170.2         30954-31364
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 56.86 cM"
     gene            1..1321
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /note="SH3-binding domain glutamic acid-rich protein"
                     /db_xref="GeneID:50795"
                     /db_xref="MGI:MGI:1354740"
     exon            1..279
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             235..879
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /codon_start=1
                     /product="SH3 domain-binding glutamic acid-rich protein"
                     /protein_id="NP_056640.1"
                     /db_xref="CCDS:CCDS28355.1"
                     /db_xref="GeneID:50795"
                     /db_xref="MGI:MGI:1354740"
                     /translation="MVIKVFVATSSGSIAIRKKQQEVVGFLEANKIDFKELDIAGDED
                     NRKWMRENVPGEKKPQNGIPLPPQIFNEEQYCGDFDSFFSAKEENIIYSFLGLAPPPG
                     SKVTKSEEASSLPNGDVAGEAEGAAEGTEKAEKSGENEAQKEDSEDTGELSESQEKKE
                     EEGEDGEEGEEGEEREEGGEGETTGETEEAPEEGAGGEAEEEEPEEEAGEGEDS"
     exon            280..465
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            466..546
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            547..618
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            619..711
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            712..792
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            793..910
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            911..1321
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1301..1306
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1321
                     /gene="Sh3bgr"
                     /gene_synonym="5430437A18Rik"
                     /note="major polyA site"
ORIGIN      
        1 agtggctgct tttatcagcc aatcgttttc ctgacatccc aaacggaggg ggaagcccgg
       61 gatgcctccc cgttgctctt tagcctcttg gttggagggg agggctggga gcagaggctt
      121 ggatcaccgc cagccctgac ctggcacctg ctcccccggg cgtcactgcg ggatttgtcc
      181 agcgacttcc ctagcagggg tgtgttaggg ggagtcctct ttccgactgt cgaaatggtt
      241 atcaaagtgt ttgttgccac atcttctggg tccatagcga ttaggaaaaa acagcaagaa
      301 gtggtgggct ttttggaagc caataaaata gacttcaagg agctggacat agctggggat
      361 gaagacaaca gaaagtggat gagagagaat gttcccgggg agaagaaacc tcagaatggg
      421 atccctttgc cccctcagat cttcaatgaa gagcagtatt gtggggactt tgactccttc
      481 ttctcggcaa aagaagaaaa tattatttat tcattccttg gtctggctcc ccctcctggg
      541 tcaaaggtga caaagtctga ggaagcatcc tcccttccca atggagatgt agcaggagag
      601 gcagagggtg ctgcagaggg aacagagaag gctgaaaaaa gtggagaaaa tgaggcacag
      661 aaagaggaca gtgaagacac tggagagctt tctgaatccc aagagaagaa ggaagaagag
      721 ggagaagacg gagaagaggg agaagaggga gaagagagag aagagggagg agagggagag
      781 acaacaggag agacggaaga ggcaccagag gaaggagcag ggggggaagc tgaagaagag
      841 gagcctgagg aagaggcagg agaaggggaa gattcttagg cctttcaggc tggtgcttca
      901 actttcccag aatatccgag ccacgaggct acatttgaac tctctcttct ccattaacgc
      961 aacgaaatac ttggctggaa gccagcaccc ttccctcggc acacctgggt tcactgagga
     1021 ctcacgccct cccagacagc taggtgcatg tgggtctcta cctcactgtg tcaacacgag
     1081 gctgaatgtg aagactgcac gcgtacgctg cctgaaattt ttggtctttg cttaacgttt
     1141 gtttccttgg ctatgcacaa gtagaccttc tcgttaatat tctgcaaaca ggatcttgag
     1201 gcgtagtttc ccctctgtga catagcagaa ggatttcttt gtgtactgct tgttttaggc
     1261 ttggctttca gaacaaaaca cttcccagag agcaatcata aataaagatt gatgccaaga
     1321 a
//
